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Context-dependent role of sirtuin 2 in inflammation

Neural Regeneration Research 2025年第3期20卷 682-694页

作者： NoemíSola-Sevilla Maider Garmendia-Berges MCarmen Mera-Delgado Elena Puerta department of Pharmaceutical Sciences Division of PharmacologySchool of Pharmacy and NutritionUniversity of NavarraPamplonaSpain Navarra Institute for Health Research(IdiSNA) PamplonaSpain

Sirtuin 2 is a member of the sirtuin family nicotinamide adenine dinucleotide(NAD~+)-dependent deacetylases, known for its regulatory role in different processes, including inflammation. In this context, sirtuin 2 has been involved in the modulation of key inflammatory signaling pathways and transcription factors by deacetylating specific targets, such as nuclear factor κB and nucleotide-binding oligomerization domain-leucine-rich-repeat and pyrin domain-containing protein 3(NLRP3). However, whether sirtuin 2-mediated pathways induce a pro-or an anti-inflammatory response remains controversial. Sirtuin 2 has been implicated in promoting inflammation in conditions such as asthma and neurodegenerative diseases, suggesting that its inhibition in these conditions could be a potential therapeutic strategy. Conversely, arthritis and type 2 diabetes mellitus studies suggest that sirtuin 2 is essential at the peripheral level and, thus, its inhibition in these pathologies would not be recommended. Overall, the precise role of sirtuin 2 in inflammation appears to be context-dependent, and further investigation is needed to determine the specific molecular mechanisms and downstream targets through which sirtuin 2 influences inflammatory processes in various tissues and pathological conditions. The present review explores the involvement of sirtuin 2 in the inflammation associated with different pathologies to elucidate whether its pharmacological modulation could serve as an effective strategy for treating this prevalent symptom across various diseases.

关键词： interferon inflammation lipopolysaccharide neuroinflammation NLRP3 nuclear factorκB sirtuin 2

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Maximizing biomass utilization: An integrated strategy for coproducing multiple chemicals

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Journal of Energy Chemistry 2025年第1期100卷 180-191页

作者： Byeongchan Ahn Sua Jo Jonggeol Na J.Jay Liu Young-Ju Kim Wangyun Won department of Chemical and Biological Engineering Korea University department of Chemical Engineering (Integrated process) Kyung Hee University department of Chemical Engineering and Materials Science Ewha Womans University department of Chemical Engineering Pukyong National University Resources Engineering plant Research department Korea Institute of Geoscience and Mineral Resources

Lignocellulosic biomass is one of the viable solutions to alleviate the global warming. However, the limited utilization of biomass majorly focused on cellulose and hemicellulose restricts the economic and environmental feasibilities. To cope with this issue, we proposed an integrated process of co-producing 1,6-hexanediol（1,6-HDO） with tetrahydrofuran and adipic acid from biomass, referred to as Strategy A. To compare the impacts of lignin upgrading and feedstock, Strategy B, which co-produces tetrahydrofuran alone, and Strategy C, which is the traditional route to produce 1,6-HDO from fossil fuels, were used. Heat networks are also designed to reduce operating costs and indirect carbon emissions due to energy consumption, saving 87% and 83% of the heat and cooling requirements, respectively, in Strategy A. The market competitiveness of Strategy A was evaluated by determining the minimum selling price through techno-economic analysis, and sustainability was thoroughly investigated by quantifying the environmental impacts through both midpoint and endpoint life-cycle assessments（LCAs）.Strategy A was found to be the most favorable both economically（USRDSCHARDOLLAR3,402/ton） and environmentally（-26.9 kg CO2eq.）. This indicates that lignin valorization is not only economically but also environmentally preferred. Finally, changes in economic and environmental feasibilities depending on economic, process, and environmental parameters were investigated using sensitivity and uncertainty analyses. The results of these analyses provide valuable insight into bio-based chemical production.

关键词： Carbon capture and utilization

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Pro-resolving lipid mediator reduces amyloid-β42–induced gene expression in human monocyte–derived microglia

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Neural Regeneration Research 2025年第3期20卷 873-886页

作者： Ying Wang Xiang Zhang Henrik Biverstål Nicolas GBazan Shuai Tan Nailin Li Makiko Ohshima Marianne Schultzberg Xiaofei Li department of Neurobiology Care Sciences&SocietyDivision of NeurogeriatricsKarolinska InstitutetStockholmSweden department of Neurology Neuroscience CenterThe First Hospital of Jilin UniversityChangchunJilin ProvinceChina department of Physiology and Pharmacology Karolinska InstitutetStockholmSweden department of Biosciences and nutrition Karolinska InstitutetHuddingeSweden Neuroscience Center of Excellence Louisiana State UniversityNew OrleansLAUSA department of Medicine SolnaClinical Pharmacology GroupKarolinska University HospitalStockholmSweden

Specialized pro-resolving lipid mediators including maresin 1 mediate resolution but the levels of these are reduced in Alzheimer's disease brain, suggesting that they constitute a novel target for the treatment of Alzheimer's disease to prevent/stop inflammation and combat disease pathology. Therefore, it is important to clarify whether they counteract the expression of genes and proteins induced by amyloid-β. With this objective, we analyzed the relevance of human monocyte–derived microglia for in vitro modeling of neuroinflammation and its resolution in the context of Alzheimer's disease and investigated the pro-resolving bioactivity of maresin 1 on amyloid-β42–induced Alzheimer's disease–like inflammation. Analysis of RNA-sequencing data and secreted proteins in supernatants from the monocyte-derived microglia showed that the monocyte-derived microglia resembled Alzheimer's disease–like neuroinflammation in human brain microglia after incubation with amyloid-β42. Maresin 1 restored homeostasis by down-regulating inflammatory pathway related gene expression induced by amyloid-β42 in monocyte-derived microglia, protection of maresin 1 against the effects of amyloid-β42 is mediated by a re-balancing of inflammatory transcriptional networks in which modulation of gene transcription in the nuclear factor-kappa B pathway plays a major part. We pinpointed molecular targets that are associated with both neuroinflammation in Alzheimer's disease and therapeutic targets by maresin 1. In conclusion, monocyte-derived microglia represent a relevant in vitro microglial model for studies on Alzheimer's disease-like inflammation and drug response for individual patients. Maresin 1 ameliorates amyloid-β42–induced changes in several genes of importance in Alzheimer's disease, highlighting its potential as a therapeutic target for Alzheimer's disease.

关键词： Alzheimer's disease amyloid-β maresin microglia monocyte neuroinflammation resolution RNA-sequencing specialized pro-resolving lipid mediator

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Effect of long-term fertilization on soil nitrate distribution

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Journal of Environmental Sciences 2001年第1期13卷 58-63页

作者： GUO Li ping ZHANG Fu suo WANG Xing ren MAO Da ru CHEN Xin ping department of plant nutrition China Agricultural UniversityBeijing 100094China.

A thirteen years long-term field fertilizer experiment was conducted to monitor the effect of different fertilization on soil nitrate distribution. The results showed: (1) Applying relative excessive N fertilizer could result large quantities of NO3- residue and NO3- movement downward in soil profiles; amending phosphate fertilizer or organic manure with nitrogen fertilizer together could significantly improve the status of NO3- leaching downward due to the balanced uptake of nutrients by crops. ( 2) Appropriate amounts of nitrogen fertilizer which was equal or smaller than the optimal fertilization rate could not result in more NO3- leaching in Northern China. (3) Precipitation influenced the amounts and depth of soil NO3- leaching: NO3- could move to 80 cm depth or below at autumn or at the next spring when rainfall was higher during the rainy season through July to September in North China.

关键词： fertilization soil nitrate nitrate leaching long-term experiment nitrogen apparent recovery

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Shoot Apex Demand Determines Assimilate and Nutrients Partitioning and Nutrient-uptake Rate in Tobacco plants

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Journal of Integrative plant Biology 2007年第11期49卷 1654-1661页

作者： Huai-Yu Yang Chun-Jian Li Fu-Suo Zhang The Key Laboratory of plant nutrition Ministry of Agriculture Key Laboratory of Plant-Soil Interactions Ministry of Education Department of Plant Nutrition China Agricultural University Beijing 100094 China

Our previous experiment revealed that apex-removed plants have larger root systems but a lower K＋-uptake rates than intact tobacco plants. Since the apex is not only a center of growth and metabolism, but also an important place of auxin synthesis and export, the aims of this study were to distinguish whether the apex demand or auxin synthesized in the apex regulates assimilate and nutrients partitioning within plant, and to explain the reason for the lower K＋-uptake rate of the apex-removed plant. In comparison with the control plant, covering the shoot apex with a black transparent plastic bag reduced net increases in dry matter and nutrients; however, the distribution of the dry matter and nutrients between shoot and roots and nutrient-uptake rates were not changed. Removal of the shoot apex shifted the dry mass and nutrients distributions to roots, and reduced the rate of nutrient uptake. Application of 1-naphthylacetic acid （NAA） could partly replace the role of the removed apex, stimulated assimilate and nutrient deposition into the treated tissue, and enhanced the reduced plasma membrane ATPase activity of roots to the control level. However, treatment of the apex-removed plants with NAA could not rescue the reduced nutrient uptake rate and the shifted assimilates and nutrients partitioning caused by excision of the apex. Higher nutrient uptake rate of the intact plants could not be explained by root growth parameters, such as total root surface area and number of root tips. The results from the present study indicate that strong apex demand determined assimilates and nutrients partitioning and nutrient-uptake rate in tobacco （Nicotiana tabacum） plants.

关键词： assimilate and nutrient partitioning auxin nutrient uptake removal of the shoot apex shoot apex demand tobacco (Nicotiana tabacum).

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Ammonium improves iron nutrition by decreasing leaf apoplastic pH of sunflower plants(Helianthus annuus ***)

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Chinese Science Bulletin 2003年第20期48卷 2215-2220页

作者： ZOU Chunqin & ZHANG Fusuo Key Laboratory of plant-Soil Interactions, Ministry of Education Key Laboratory of plant nutrition, Ministry of Agriculture of China department of plant nutrition, China Agricultural University, Beijing 100094, China Correspondence should be addressed to Zhang Fusuo (e-mail: zhangfs@ ***) Key Laboratory of plant-Soil Interactions Ministry of Education of China Department of Plant Nutrition China Agricultural University Beijing China Key Laboratory of plant nutrition Ministry of Agriculture of China Department of Plant Nutrition China Agricultural University Beijing China

The effect of nitrogen form on pH and concentration of soluble iron (Fe) in leaf apoplast was investigated in hydrophonically grown sunflower plants (Helianthus annuus L. cv. Frankasol), and the mechanism underlying the improved Fe nutrition by ammonium (NH4) supply was also elucidated. Ammonium supply ameliorated Fe nutrition of plants grown without Fe through decreasing apoplastic pH and increasing soluble Fe concentration in apoplastic fluid of young leaves. The soluble Fe concentration in apoplastic fluid and cell sap of young leaves, and xylem exudates of NH4 fed-plants was higher than that of nitrate (NO3) fed-plants, and no typical Fe-deficiency chlorosis in young leaves was observed in NH4 fed plant without Fe supply. The apoplastic pH was 6.15 and 5.94 in young leaves of Fe-deficient plants fed respectively with NO3 and NH4, while in Fe-sufficient plants, the apoplastic pH was 6.43 with NO3, and 5.50 with NH4 supply. In primary leaves, the apoplastic pH was around 6.25 irrespective of nitrogen form and Fe supply. The pH of xylem exudate was 5.72 in Fe-deficient plants fed with NO3 and 5.49 with NH4. Iron nutrition increased the pH of xylem exudate by 0.27 and 0.16 unit under NO3 and NH4 supply respectively.

关键词：向日葵铁营养学非原质体 pH值氮铵赋存形态植物生理学

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Modulation of Soil Particle Size and Nutrient Availability in the Maize Rhizosheath

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Pedosphere 2011年第4期21卷 483-490页

作者： MA Wei LI Xue-Xian LI Chun-Jian department of plant nutrition China Agricultural University Beijing 100193 (China)

Root exudates,microorganism colonization and soil aggregates together form the rhizosheath,a special cylinder of micro-ecosystem adhering to the root *** study how the rhizosheath affects soil structure and nutrient distribution,we analyzed the impact of maize rhizosheath on soil particle size and nutrient availability in pot and field *** results showed that there was a significant size decrease of soil particles in the ***,the soil mineral nitrogen in the rhizosheath was significantly higher than that in the rhizosphere or bulk soil at tasseling and maturity stages of *** contents of Fe and Mn were also differentially altered in the *** development,indicated by a dry weight ratio of rhizosheath soil to the root,was relatively independent of root development during the whole experimental *** formation of maize rhizosheath contributed to the modulation of soil particle size and nutrient *** subtle local changes of soil physical and chemical properties may have profound influence on soil formation,rhizospheric ecosystem initiation,and mineral nutrient mobilization over the long history of plant evolution and domestication.

关键词： micronutrient mineral nitrogen mucilage rhizosphere root exudates

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Epigenetics in the modern era of crop improvements

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Science China Life Sciences 2025年

作者： Yan Xue Xiaofeng Cao Xiangsong Chen Xian Deng Xingwang Deng Yong Ding Aiwu Dong Chengguo Duan Xiaofeng Fang Lei Gong Zhizhong Gong Xiaofeng Gu Chongsheng He Hang He Shengbo He Xinjian He Yan He Yuehui He Guifang Jia Danhua Jiang Jianjun Jiang Jinsheng Lai Zhaobo Lang Chenlong Li Qing Li Xingwang Li Bao Liu Bing Liu Xiao Luo Yijun Qi Weiqiang Qian Guodong Ren Qingxin Song Xianwei Song Zhixi Tian Jiawei Wang Yuan Wang Liang Wu Zhe Wu Rui Xia Jun Xiao Lin Xu Zhengyi Xu Wenhao Yan Hongchun Yang Jixian Zhai Yijing Zhang Yusheng Zhao Xuehua Zhong Daoxiu Zhou Ming Zhou Yue Zhou Bo Zhu Jiankang Zhu Qikun Liu College of Life Sciences Institute of Life Science and Green Development Hebei University Biotechnology Research Institute Chinese Academy of Agricultural Sciences College of Biology Hunan Key Laboratory of Plant Functional Genomics and Developmental Regulation Hunan Engineering and Technology Research Center of Hybrid Rapeseed Hunan University Institute of Advanced Agricultural Sciences School of Advanced Agricultural Sciences Peking University State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources Guangdong Laboratory for Lingnan Modern Agriculture South China Agricultural University National Institute of Biological Sciences Key Laboratory of Seed Innovation Institute of Genetics and Developmental Biology Chinese Academy of Sciences School of Advanced Agricultural Sciences Peking-Tsinghua Center for Life Sciences Peking University Synthetic and Functional Biomolecules Center Beijing National Laboratory for Molecular Sciences Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education College of Chemistry and Molecular Engineering Peking University Key Laboratory of Seed Innovation State Key Laboratory of Plant Genomics and National Center for Plant Gene Research Institute of Genetics and Developmental Biology Chinese Academy of Sciences State Key Laboratory of Wheat Improvement Peking University Institute of Advanced Agricultural Sciences Shandong Laboratory of Advanced Agricultural Sciences in Weifang State Key Laboratory of Crop Stress Adaptation and Improvement School of Life Sciences Henan University State Key Laboratory of Maize Bio-breeding National Maize Improvement Center Department of Plant Genetics and Breeding China Agricultural University Frontiers Science Center for Molecular Design Breeding China Agricultural University Center for Crop Functional Genomics and Molecular Breeding China Agricultural University Sanya Institute of China Agricultural University Hainan Yazhou Bay Seed Laboratory Institute of Advan

Epigenetic mechanisms are integral to plant growth, development, and adaptation to environmental stimuli. Over the past two decades,our comprehension of these complex regulatory processes has expanded remarkably, producing a substantial body of knowledge on both locus-specific mechanisms and genome-wide regulatory patterns. Studies initially grounded in the model plant Arabidopsis have been broadened to encompass a diverse array of crop species, revealing the multifaceted roles of epigenetics in physiological and agronomic traits. With recent technological advancements, epigenetic regulations at the single-cell level and at the large-scale population level are emerging as new focuses. This review offers an in-depth synthesis of the diverse epigenetic regulations, detailing the catalytic machinery and regulatory functions. It delves into the intricate interplay among various epigenetic elements and their collective influence on the modulation of crop traits. Furthermore, it examines recent breakthroughs in technologies for epigenetic modifications and their integration into strategies for crop improvement. The review underscores the transformative potential of epigenetic strategies in bolstering crop performance, advocating for the development of efficient tools to fully exploit the agricultural benefits of epigenetic insights.

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Interaction effect of nitrogen form and planting density on plant growth and nutrient uptake in maize seedlings

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Journal of Integrative Agriculture 2019年第5期18卷 1120-1129页

作者： WANG Peng WANG Zhang-kui SUN Xi-chao MU Xiao-huan CHEN Huan CHEN Fan-jun Yuan Li-xing MI Guo-hua department of plant nutrition College of Resources and Environmental SciencesChina Agricultural University

High planting density is essential to increasing maize grain ***,single plants suffer from insufficient light under high planting ***(NH_4^+)assimilation consumes less energy converted from radiation than nitrateIt is hypothesized that a mixed NO_3~–/NH_4^+supply is more important to improving plant growth and population productivity under high *** planting *** plants were grown under hydroponic conditions at two planting densities(low density:only).A significant interaction effect was found between planting density and N form on plant *** to nitrate only,75/25NO_3~–/NH_4^+increased per-plant biomass by 44%under low density,but by 81%under high *** with 75/25NO_3~–/NH_4^+increased plant ATP,photosynthetic rate,and carbon amount per plant by 31,7,and 44%under low density,respectively,but by 51,23,and 95%under high ***,carbon level per plant under 75/25NO_3~–/NH_4^+was improved,which increased leaf area,specific leaf weight and total root length,especially for high planting density,increased by 57,17 and 63%,***,under low density,75/25NO_3~–/NH_4^+increased nitrogen uptake rate,while under high density,75/25NO_3~–/NH_4^+increased nitrogen,phosphorus,copper and iron uptake *** increasing energy use efficiency,an optimum NO_3~–/NH_4^+ratio can improve plant growth and nutrient uptake efficiency,especially under high planting *** summary,an appropriate supply of NH_4^+in addition to nitrate can greatly improve plant growth and promote population productivity of maize under high planting density,and therefore a mixed N form is recommended for high-yielding maize management in the field.

关键词： maize planting density NO3^-/NH4^+ ratio carbon nutrient uptake root morphology

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Modeling aggregate size distribution of eroded sediment resulting from rain-splash and raindrop impacted flow processes

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International Journal of Sediment Research 2019年第2期34卷 166-177页

作者： Selen Deviren Saygin Gunay Erpul department of Soil Science and plant nutrition Faculty of AgricultureUniversity of Ankara

Soil susceptibility to detachment and transport sub-processes of erosion is generally controled by the aggregate breakdown *** particle size and aggregation to the estimate erodibility potential of soils is important under erosive rainfall *** Aggregate Size Distribution（ASD）is one of the most important determinants of soil structure along with soil organic matter content for describing the efficiency of applied,sustainable management *** study aimed to compare the performances of three different aggregate size distribution models to predict the characteristic aggregate size parameter(median diameter,D50)for eroded sediment from interrill erosion processes of RainSplash Transport（RST）and Raindrop Impacted Flow Transport（RIFT）.The ASDs of 1143 collected sediment samples from the RST and RIFT processes were measured and modeled by the Log-normal,Fractal,and Weibull *** D50value,as a characteristic parameter for aggregate size distributions,derived from the cumulative ASD curve was compared for soils from different land use types and different slope and rainfall intensity *** performance of each model was evaluated using the Mean Square Error（MSE）and Coefficient of Determination（R2）.The Weibull approach was the most accurate model showing the best fit with the lowest MSE values（0.0002≤MSE≤0.0048）and having the greatest R2values（0.936≤R2≤0.998）when compared with the Log-normal and Fractal ***,for semi-arid land use and soil,specific shape and scale parameters for the Weibull distribution,the respective ASDs were successfully re-generated for modeling the eroded sediment of the simulated RST and RIFT interill processes.

关键词： Aggregate size distribution Eroded sediment Log-normal model Fractal model Weibull model

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