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Camellia sinensis CsMYB4a participates in regulation of stamen growth by interaction with auxin signaling transduction repressor CsAUX/IAA4

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The Crop Journal 2024年第1期12卷 188-201页

作者： Guoliang Ma Mingzhuo Li Yingling Wu Changjuan Jiang Yifan Chen Dawei Xing Yue Zhao Yajun Liu Xiaolan Jiang Tao Xia Liping Gao School of Life Science Anhui Agricultural UniversityHefei 230036AnhuiChina Plant for Human Health Institute Department of Plant and Microbial BiologyNorth Carolina State UniversityKannapolisNC 28081USA State Key Laboratory of Tea Plant Biology and Utilization/Key Laboratory of Tea Biology and Tea Processing of Ministry of Agriculture/Anhui Provincial Laboratory of Tea Plant Biology and Utilization Anhui Agricultural UniversityHefei 230036AnhuiChina

Subgroup 4(Sg4)members of the R2R3-MYB are generally known as negative regulators of the phenylpropanoid pathway in plants.Our previous research showed that a R2R3-MYB Sg4 member from Camellia sinensis(CsMYB4a)inhibits expression of some genes in the phenylpropanoid pathway,but its physiological function in the tea plant remained unknown.Here,CsMYB4a was found to be highly expressed in anther and filaments,and participated in regulating filament growth.Transcriptome analysis and exogenous auxin treatment showed that the target of CsMYB4a might be the auxin signal pathway.auxin/indole-3-acetic acid 4(AUX/IAA4),a repressor in auxin signal transduction,was detected from a yeast two-hybrid screen using CsMYB4a as bait.Gene silencing assays showed that both CsIAA4 and CsMYB4a regulate filament growth.Tobacco plants overexpressing CsIAA4 were insensitive to exogenous a-NAA,consistent with overexpression of CsMYB4a.Protein-protein interaction experiments revealed that CsMYB4a interacts with N-terminal of CsIAA4 to prevent CsIAA4 degradation.Knock out of the endogenous NtIAA4 gene,a CsIAA4 homolog,in tobacco alleviated filament growth inhibition and a-NAA insensitivity in plants overexpressing CsMYB4a.All results strongly suggest that CsMYB4a works synergistically with CsIAA4 and participates in regulation of the auxin pathway in stamen.

关键词： AUX/IAA4 auxin signaling CsMYB4a Subgroup 4 R2R3-MYB

Hydrogen Peroxide-Mediated Growth of the Root System Occurs via auxin signaling Modification and Variations in the Expression of Cell-Cycle Genes in Rice Seedlings Exposed to Cadmium Stress

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Journal of Integrative Plant Biology 2012年第12期54卷 991-1006页

作者： Feng-Yun Zhao Ming-Ming Han Shi-Yong Zhang Kai Wang Cheng-Ren Zhang Tao Liu Wen Liu College of Life Sciences Shandong University of Technology Shandong Rice Research Institute

The link between root growth, H2O2, auxin signaling, and the ceil cycle in cadmium （Cd）-stressed rice （Oryza sativa L. cv. Zhonghua No. 11） was analyzed in this study. Exposure to Cd induced a significant accumulation of Cd, but caused a decrease in zinc （Zn） content which resulted from the decreased expression of OsHMA9 and OsZIP. Analysis using a Cd-specific probe showed that Cd was mainly localized in the meristematic zone and vascular tissues. Formation and elongation of the root system were significantly promoted by 3-amino-l,2,4-triazole （AT）, but were markedly inhibited by N,N＇. dimethylthiourea （DMTU） under Cd stress. The effect of H2O2 on Cd-stressed root growth was further confirmed by examining a gain-of-function rice mutant （carrying catalasel and glutathione-S-transferase） in the presence or absence of diphenylene iodonium. DR5-GUS staining revealed close associations between H2O2 and the concentration and distribution of auxin. H2O2 affected the expression of key genes, including OsYUCCA, OsPIN, OsARF, and OslAA, in the auxin signaling pathway in Cd-treated plants. These results suggest that H2O2 functions upstream of the auxin signaling pathway. Furthermore, H2O2 modified the expression of cell-cycle genes in Cd-treated roots. The effects of H2O2 on root system growth are therefore linked to auxin signal modification and to variations in the expression of cell-cycle genes in Cd-stressed rice. A working model for the effects of H2O2 on Cd-stressed root system growth is thus proposed and discussed in this paper.

关键词： auxin signaling cadmium stress cell cycle hydrogen peroxide rice root system.

Mitochondrial Perturbation Negatively Affects auxin signaling

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Molecular Plant 2014年第7期7卷 1138-1150页

作者： Pavel Ivanov Kerchev Inge De Clercq Jordi Denecker Per Muihlenbock Robert Kumpf Long Nguyen Dominique Audenaert Wim Dejonghe Frank Van Breusegem Department of Plant Systems Biology VIB Ghent University B-9052 Gent Belgium Department of Plant Biotechnology and Bioinformatics Ghent University B-9052 Gent Belgium Present address: Department of Plant Protection Biology Swedish University of Agricultural Sciences SE-230 53 Alnarp Sweden VlB Compound Screening Facility B-9052 Gent Belgium

Mitochondria are crucial players in the signaling and metabolic homeostasis of the plant cell. The molecular components that orchestrate the underlying processes, however, are largely unknown. Using a chemical biology approach, we exploited the responsiveness of Arabidopsis UDP-glucosyltransferase-encoding UGT74E2 towards mitochondrial per- turbation in order to look for novel mechanisms regulating mitochondria-to-nucleus communication. The most potent inducers of UGT74E2 shared a （2-furyl）acrylate （FAA） substructure that negatively affected mitochondrial function and was identified before as an auxin transcriptional inhibitor. Based on these premises, we demonstrated that perturbed mitochondria negatively affect the auxin signaling machinery. Moreover, chemical perturbation of polar auxin transport and auxin biosynthesis was sufficient to induce mitochondrial retrograde markers and their transcript abundance was constitutively elevated in the absence of the auxin transcriptional activators ARF7 and ARF19.

关键词： mitochondrial perturbation auxin signaling retrograde communication.

Submergence promotes auxin-induced callus formation through ethylene-mediated post-transcriptional control of auxin receptors

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Molecular Plant 2022年第12期15卷 1947-1961页

作者： Seung Yong Shin Yuri Choi Sang-Gyu Kim Su-Jin Park Ji-Sun Park Ki-Beom Moon Hyun-Soon Kim Jae Heung Jeon Hye Sun Cho Hyo-Jun Lee Plant Systems Engineering Research Center Korea Research Institute of Bioscience and BiotechnologyDaejeon 34141Korea Department of Functional Genomics KRIBB School of BioscienceUniversity of Science and TechnologyDaejeon 34113Korea Department of Biological Sciences Korea Advanced Institute of Science and TechnologyDaejeon 34141Korea Department of Biosystems and Bioengineering KRIBB School of BiotechnologyUniversity of Science and TechnologyDaejeon 34113Korea Department of Biological Sciences Sungkyunkwan UniversitySuwon 16419Korea

Plant cells in damaged tissue can be reprogrammed to acquire pluripotency and induce callus formation.However,in the aboveground organs of many species,somatic cells that are distal to the wound site become less sensitive to auxin-induced callus formation,suggesting the existence of repressive regulatory mechanisms that are largely unknown.Here we reveal that submergence-induced ethylene signals promote callus formation by releasing post-transcriptional silencing of auxin receptor transcripts in non-wounded regions.We determined that short-term submergence of intact seedlings induces auxin-mediated cell dedifferentiation across the entirety of Arabidopsis thaliana explants.The constitutive triple response 1-1(ctr1-1)mutation induced callus formation in explants without submergence,suggesting that ethylene facilitates cell dedifferentiation.We show that ETHYLENE-INSENSITIVE 2(EIN2)post-transcriptionally regulates the abundance of transcripts for auxin receptor genes by facilitating microRNA393 degradation.Submergence-induced calli in non-wounded regions were suitable for shoot regeneration,similar to those near the wound site.We also observed submergence-promoted callus formation in Chinese cabbage(Brassica rapa),indicating that this may be a conserved mechanism in other species.Our study identifies previously unknown regulatory mechanisms by which ethylene promotes cell dedifferentiation and provides a new approach for boosting callus induction efficiency in shoot explants.

关键词： cell dedifferentiation auxin signaling ethylene callus formation EIN2

The AFB1 auxin receptor controls the cytoplasmic auxin response pathway in Arabidopsis thaliana

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Molecular Plant 2023年第7期16卷 1120-1130页

作者： Shiv Mani Dubey Soeun Han Nathan Stutzman Michael J.Prigge Eva Medvecka Matthieu Pierre Platre Wolfgang Busch Matyas Fendrych Mark Estelle Department of Experimental Plant Biology Faculty of SciencesCharles UniversityPragueCzech Republic Section of Cell and Developmental Biology University of California San DiegoLa JollaCAUSA Plant Molecular and Cellular Biology Laboratory and Integrative Biology Laboratory Salk Institute for Biological StudiesLa JollaCAUSA Department of Biology Chungbuk National UniversityCheongjuKorea

The phytohormone auxin triggers root growth inhibition within seconds via a non-transcriptionalpathway.Among members of the TIR1/AFB auxin receptor family,AFB1 has a primary role in this rapidresponse. However, the unique features that confer this specific function have not been identified.Here we show that the N-terminal region of AFB1, including the F-box domain and residues thatcontribute to auxin binding,is essential and sufficient for its specific role in the rapid response. Substitutionof the N-terminal region of AFB1 with that of TIR1 disrupts its distinct cytoplasm-enriched localizationand activity in rapid root growth inhibition by auxin. Importantly, the N-terminal region of AFB1 isindispensable for auxin-triggered calcium influx, which is a prerequisite for rapid root growth inhibition.Furthermore, AFB1 negatively regulates lateral root formation and transcription of auxin-induced genes,suggesting that it plays an inhibitory role in canonical auxin signaling. These results suggest that AFB1may buffer the transcriptional auxin response, whereas it regulates rapid changes in cell growth thatcontributeto rootgravitropism.

关键词： gravitropism calcium auxin signaling Arabidopsis lateral root

Advances in structure and function of auxin response factor in plants

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Journal of Integrative Plant Biology 2023年第3期65卷 617-632页

作者： Yonghui Li Shaqila Han Yanhua Qi Key Laboratory of Herbage&Endemic Crop Biology of Ministry of Education Inner Mongolia Key Laboratory of Herbage&Endemic Crop BiotechnologySchool of Life SciencesInner Mongolia UniversityHohhot 010000China State Key Laboratory of Plant Physiology and Biochemistry Collegeof Life SciencesZhejiang UniversityHangzhou 310058China

auxin is a crucial phytohormone that has various effects on the regulators of plant growth and development.auxin signal transduction is mainly controlled by two gene families:auxin response factor(ARF)and auxin/indole-3-acetic acid(Aux/IAA).ARFs are plant-specific transcription factors that bind directly to auxin response elements in the promoters of auxinresponsive genes.ARF proteins contain three conserved regions:a conserved N-terminal B3DNA-binding domain,a variable intermediate middle region domain that functions in activation or repression,and a C-terminal domain including the Phox and Bem1p region for dimerization,similar to theⅢandⅣelements of Aux/IAA,which facilitate protein–protein interaction through homodimerization of ARF proteins or heterodimerization of ARF and Aux/IAA proteins.In the two decades following the identification of the first ARF,23 ARF members have been identified and characterized in Arabidopsis.Using whole-genome sequencing,22,25,23,25,and 36 ARF genes have been identified in tomato,rice,wheat,sorghum,and maize,respectively,in addition to which the related biofunctions of some ARFs have been reported.ARFs play crucial roles in regulating the growth and development of roots,leaves,flowers,fruits,seeds,responses to biotic and abiotic stresses,and phytohormone signal crosstalk.In this review,we summarize the research progress on the structures and functions of ARFs in Arabidopsis,tomato,and cereal crops,to provide clues for future basic research on phytohormone signaling and the molecular design breeding of crops.

关键词： auxin response factor auxin signaling biological function biotic and abiotic stresses plant growth development

Repression of the auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi

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Molecular Plant 2008年第3期1卷 496-509页

作者： Francisco Llorente Paul M usksktt Andrea Sanchez-Vallet Gemma Lopez Brisa Ramos Clara Sanchez-Rodriguez Lucia Jorda Jane Parker Antonio Molina Centro de Biotecnologia y Genbmica de Plantas (CBGP) Departamento de Biotecnologia-UPM ETS Ingenieros Agrbnomos Avda Complutense E-28040Madrid Spain Department of Plant-Microbe Interactions Max Planck Institute for Plant Breeding Research Carl-von-Linne Weg 10 50829 Cologne Germany

In plants, resistance to necrotrophic pathogens depends on the interplay between different hormone systems, such as those regulated by salicylic acid （SA）, jasmonic acid （JA）, ethylene, and abscisic acid. Repression of auxin signaling by the SA pathway was recently shown to contribute to antibacterial resistance. Here, we demonstrate that Arabidopsis auxin signaling mutants axrl, axr2, and axr6 that have defects in the auxin-stimulated SCF （Skpl-Cullin- F-box） ubiquitination pathway exhibit increased susceptibility to the necrotrophic fungi Plectosphaerella cucumerina and Botrytis cinerea. Also, stabilization of the auxin transcriptional repressor AXR3 that is normally targeted for removal by the SCF-ubiquitin/proteasome machinery occurs upon P. cucumerina infection. Pharmacological inhibition of auxin transport or proteasome function each compromise necrotroph resistance of wild-type plants to a similar extent as in non-treated auxin response mutants. These results suggest that auxin signaling is important for resistance to the necrotro- phic fungi P. cucumerina and B. cinerea. SGTlb （one of two Arabidopsis SGT1 genes encoding HSP90/HSC70 co-chaperones） promotes the functions of SCF E3-ubiquitin ligase complexes in auxin and JA responses and resistance conditioned by certain Resistance （R） genes to biotrophic pathogens. We find that sgtlb mutants are as resistant to P. cucumerina as wild-type plants. Conversely, auxin/SCF signaling mutants are uncompromised in RPP4-triggered resistance to the obligate biotrophic oomycete, Hyaloperonospora parasitica. Thus, the predominant action of SGTlb in R gene-conditioned resis- tance to oomycetes appears to be at a site other than assisting SCF E3-ubiquitin ligases. However, genetic additivity of sgtlb axrl double mutants in susceptibility to H. parasitica suggests that SCF-mediated ubiquitination contributes to lim- iting biotrophic pathogen colonization once plant-pathogen compatibility is established.

关键词： plant defense innate immunity necrotrophic fungi auxin signaling proteasome.

DNA Topoisomerase 1 Prevents R-loop Accumulation to Modulate auxin-Regulated Root Development in Rice

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Molecular Plant 2017年第6期10卷 821-833页

作者： Sarfraz Shafiq Chunli Chen Jing Yang Lingling Cheng Fei Ma Emilie Widemann Qianwen Sun Center for Plant Biology and Tsinghua-Peking Joint Center for Life Sciences School of Life Sciences Tsinghua University Beijing 100084 China College of Life Science and Technology Huazhong Agricultural University Wuhan 430070 China Permanent affiliation: Department of Environmental Sciences COMSATS Institute of Information Technology Abbottabad 22060 Pakistan

R-loop structures （RNA：DNA hybrids） have important functions in many biological processes, including transcriptional regulation and genome instability among diverse organisms. DNA topoisomerase 1 （TOP1）, an essential manipulator of DNA topology during RNA transcription and DNA replication processes, can prevent R-loop accumulation by removing the positive and negative DNA supercoiling that is made by RNA polymerases during transcription. TOP1 is required for plant development, but little is known about its function in preventing co-transcriptional R-loop accumulation in various biological processes in plants. Here we show that knockdown of OsTOP1 strongly affects rice development, causing defects in root archi- tecture and gravitropism, which are the consequences of misregulation of auxin signaling and transporter genes. We found that R-loops are naturally formed at rice auxin-related gene loci, and overaccumulate when OsTOP1 is knocked down or OsTOP1 protein activity is inhibited. OsTOP1 therefore sets the accurate expression levels of auxin-related genes by preventing the overaccumulation of inherent R-loops. Our data reveal R-loops as important factors in polar auxin transport and plant root development, and highlight that OsTOP1 functions as a key to link transcriptional R-loops with plant hormone signaling, provide new in- sights into transcriptional regulation of hormone signaling in plants.

关键词： R-loops DNA TOP1 auxin signaling root development

Cytoplasmic auxin signaling

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Cytoplasmic auxin signaling