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Bibliometric analysis of subject trends and knowledge structures of gut microbiota

World Journal of Clinical Cases 2020年第13期8卷 2817-2832页

作者： Yuan-Yi Yue Xin-Yue Fan Qiang Zhang Yi-Ping Lu Si Wu Shuang Wang Miao Yu Chang-Wan Cui zheng-rong sun Department of Gastroenterology Medicine Shengjing Hospital of China Medical UniversityShenyang 110004Liaoning ProvinceChina Student Affairs Department Shengjing Hospital of China Medical UniversityShenyang 110004Liaoning ProvinceChina Department of Pulmonary and Critical Care Medicine Shengjing Hospital of China Medical UniversityShenyang 110004Liaoning Province BioBank Shengjing Hospital of China Medical UniversityShenyang 110004Liaoning ProvinceChina

BACKGROUND Gut microbiota is an emerging field of research,with related research having breakthrough development in the past 15 years.Bibliometric analysis can be applied to analyze the evolutionary trends and emerging hotspots in this field.AIM To study the subject trends and knowledge structures of gut microbiota related research fields from 2004 to 2018.METHODS The literature data on gut microbiota were identified and downloaded from the PubMed database.Through biclustering analysis,strategic diagrams,and social network analysis diagrams,the main trend and knowledge structure of research fields concerning gut microbiota were analyzed to obtain and compare the research hotspots in each period.RESULTS According to the strategic coordinates and social relationship network map,Clostridium Infections/microbiology,Clostridium Infections/therapy,RNA,Ribosomal,16S/genetics,Microbiota/genetics,Microbiota/immunology,Dysbiosis/immunology,Infla-mmation/immunology,Fecal Microbiota Transplantation/methods,Fecal Microbiota Transplantation can be used as an emerging research hotspot in the past 5 years(2014-2018).CONCLUSION Some subjects were not yet fully studied according to the strategic coordinates;and the emerging hotspots in the social network map can be considered as directions of future research.

关键词： Gut microbiota Bibliometric analysis Co-word analysis Strategic coordinates Social relationship network analysis

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Genetic polymorphism of UL144 open reading frame of human cytomegalovirus DNA detected in colon samples from infants with Hirschsprung's disease

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World Journal of Gastroenterology 2007年第32期13卷 4350-4354页

作者： Zhi-Qin Mao Ying Huang Mei sun Qiang Ruan Ying Qi rong He Yu-Jing Huang Yan-Ping Ma Yao-Hua Ji zheng-rong sun Hong Gao Department of Pediatrics Second Affiliated Hospital China Medical University Shenyang 110004 Liaoning Province China Department of Pediatric Surgery Second Affiliated Hospital China Medical University Shenyang 110004 Liaoning Province China Virus Laboratory Second Affiliated Hospital China Medical University Shenyang 110004 Liaoning Province China

AIM:To explore the genetic diversities of UL144 open reading frame (ORF) of cytomegalovirus DNA detected in colon tissue from infants with Hirschsprung's disease (HD) by sequencing UL144 DNA in 23 aganglionic colon tissue and 4 urine samples from 25 HD infants. METHODS:Nest PCR was performed for amplification of the UL144 gene. The UL144 gene was analyzed with softwares,such as DNAclub,BioEdit,PROSITE database,and DNAstar. RESULTS:The strains from HD patients were distributed among three genotypes of UL144:group 1A (64%),group 2 (24%),and group 3 (12%). The UL144 genotypes between strains from HD and control group were compared by chi square test (χ2 = 1.870,P = 0.393). Strains from the colon were sporadically distributed in UL144 genotypes. CONCLUSION:There are genetic diversities of UL144 ORF in colon tissue of infants with HD. However,cytomegalovirus UL144 genotypes are not associated with clinical manifestations of HD.

关键词：多态现象细胞巨化病毒先天性巨结肠巨细胞病毒基因

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Anchoring heterometallic cluster on P-doped carbon nitride for efficient photocatalytic nitrogen fixation in water and air ambient

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Chinese Chemical Letters 2024年第4期35卷 176-180页

作者： Chao-Long Chen rong Chen La-Sheng Long Lan-sun zheng Xiang-Jian Kong Collaborative Innovation Center of Chemistry for Energy Materials State Key Laboratory of Physical Chemistry of Solid Surfaces and Department of ChemistryCollege of Chemistry and Chemical EngineeringXiamen UniversityXiamen 361005China

Light-driven nitrogen fixation to produce ammonia is a green and economical technology of nitrogen reduction but is still quite challenging, especially in an air atmosphere without any sacrificial reagents.Herein, we demonstrate efficient photocatalytic nitrogen fixation using water and air directly by loading lanthanide–transition metal(4f–3d) cluster NdCo_(3) on two-dimensional P-doped graphitic carbon nitrides(PCN) material surface. Benefiting from the increase in the number of nitrogen vacancies(NVs) and highly matched band gap structure and excellent hole trapping ability of clusters, the NdCo_(3)/PCN photocatalyst exhibits efficient nitrogen reduction activity with 371(in air) and 825 μmol h^(-1)g^(-1)(in pure nitrogen)without any sacrificial reagents. The introduction of potassium sulfate inhibits hydrogen production and promotes nitrogen reduction activation. This work suggests that anchoring precisely structured clusters on 2D materials may enhance photocatalytic nitrogen reduction under normal temperature and pressure.

关键词： Photocatalytic Nitrogen fixation 4f-3d Cluster Air atmosphere

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On-surface synthesis and characterization of polyynic carbon chains

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National Science Review 2024年第3期11卷 192-199页

作者： Wenze Gao Wei zheng Luye sun Faming Kang zheng Zhou Wei Xu Interdisciplinary Materials Research Center School of Materials Science and Engineering Tongji University

Carbyne, an elusive sp-hybridized linear carbon allotrope, has fascinated chemists and physicists for decades. Due to its high chemical reactivity and extreme instability, carbyne was much less explored in contrast to the sp2-hybridized carbon allotropes such as graphene. Herein, we report the on-surface synthesis of polyynic carbon chains by demetallization of organometallic polyynes on the Au（111） surface;the longest one observed consists of ～60 alkyne units（120 carbon atoms）. The polyynic structure of carbon chains with alternating triple and single bonds was unambiguously revealed by bond-resolved atomic force microscopy. Moreover, an atomically precise polyyne, C14, was successfully produced via tip-induced dehalogenation and ring-opening of the decachloroanthracene molecule(C14Cl10) on a bilayer NaCl/Au（111） surface at 4.7 K, and a band gap of 5.8 eV was measured by scanning tunnelling spectroscopy,in a good agreement with the theoretical HOMO–LUMO gap（5.48 eV）.

关键词： polyyne scanning probe microscopy carbon allotrope on-surface synthesis organometallic polyyne

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X-ray excited Mn^(2+)-doped persistent luminescence materials with biological window emission for in vivo bioimaging

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Journal of Rare Earths 2024年第1期42卷 28-35,I0001页

作者： Hanrun zheng Lin Liu Yi’ang Li Rui rong Liang Song Junpeng Shi Jing Teng Xia sun Yun Zhang State Key Laboratory of Structural Chemistry Fujian Institute of Research on the Structure of MatterChinese Academy of SciencesFuzhou350002China University of the Chinese Academy of Sciences Beijing100049China Xiamen Hospital of Traditional Chinese Medicine Xiamen361015China Fujian Science and Technology Innovation Laboratory for Optoelectronic Information of China Fuzhou350108China

In recent years,persistent luminescence materials(PLMs)excited by X-rays and emitting in biological windows have received extensive attention in the field of high-sensitivity bioimaging.Transition metal Mn^(2+)is an ideal emission center,but few studies focus on Mn^(2+)-doped PLMs with X-ray excitation and biological window emission.Here,we report a Mn^(2+)-doped PLM,LiYGeO_(4):Mn^(2+)(LYGM),with excellent biological window persistent luminescence emission.After excitation by UV,LYGM produces a durable biological window of persistent luminescence emission at 660 nm for up to 20 h.More importantly.LYGM can be repeatedly excited by X-rays,resulting in long-term biological window persistent luminescence emission.In addition,we obtain LYGM around 200 nm in diameter by ball milling and centrifugation and improve its biocompatibility by surface modification to apply it to in vivo imaging in mice.After LYGM are injected into mice through the tail vein,in situ excitation of X-rays can be achieved.After the persistent luminescence decays,LYGM can be re-excited for repeated imaging.Therefore,LYGM shows potential prospects for in vivo deep tissue and long-term bioimaging.

关键词： Persistent luminescence X-ray Biological window In vivo imaging Rare earths

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Targeted drug approvals in 2023:breakthroughs by the FDA and NMPA

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Signal Transduction and Targeted Therapy 2024年第3期9卷 813-821页

作者： Lang zheng Wenjing Wang Qiu sun Department of Biotherapy Cancer Center and State Key Laboratory of BiotherapyWest China HospitalSichuan UniversityChengdu 610041China West China Medical Publishers West China HospitalSichuan UniversityChengdu 610041China

According to the official website of China’s National Medicines and Pharmaceutical Administration(NMPA),a total of 87 novel drugs were approved in China in 2023,with targeted drugs accounting for 67.8%of the total,amounting to 59 drugs(Fig.1a;Table 1)[https://***/yaopin/ypjgdt/index.html].Notably,domestic innovation is flourishing,with five first-in-class drugs,including Glumetinib,a c-Met inhibitor from Haihe Biopharma;Leritrelvir,a 3CL protease inhibitor from Raynovent;Anaprazole,a proton pump inhibitor from Xuanzhu Biopharm;Pegol-Sihematide,an EPO drug from Hansoh Pharma;and Zuberitamab from BioRay Biopharmaceutical Co.,Ltd.Additionally,the world’s first allosteric inhibitor targeting TYK2,Sotyktu(deucravacitinib),has been approved for the treatment of psoriasis and Selumetinib,a MEK inhibitor co-developed by AstraZeneca and Merck Sharp&Dohme(MSD),became the first approved drug in China for the treatment of neurofibromatosis type I(NF1).Beyond these drugs,the approval of novel drug types such as CAR-T cell products,siRNA,monoclonal antibodies,dual antibodies,and ADCs in China is a significant development in the country’s pharmaceutical industry(Fig.1a).

关键词： drugs Merck approval

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Residual levels and health risk assessment of trace metals in Chinese resident diet

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Journal of Environmental Sciences 2024年第2期136卷 451-459页

作者： Yubing Dai Shuai sun rong Cao Haijun Zhang Jiping Chen Ningbo Geng CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical PhysicsChinese Academy of SciencesDalian 116023China Shenyang Pharmaceutical University Shenyang 110016China University of Chinese Academy of Sciences Beijing 100049China

Large-scale metal contamination across the food web is an intractable problem due to increasing pollutant emissions,atmospheric transport,and dry and wet deposition of elements.The present study focus on several trace metals that are rarely studied but have special toxicity,including tin(Sn),antimony(Sb),gold(Au),hafnium(Hf),palladium(Pd),platinum(Pt),ruthenium(Ru),tellurium(Te)and iridium(Ir).We investigated trace metals residues and distribution characteristics,and further evaluated the potential health risks from major daily food intakes in 33 cities in China.Sn,Sb,Ir,Hf,and Au were frequently detected in food samples with the concentrations ranged from ND(not detected)to 24.78μg/kg ww(wet weight).Eggs exhibited the highest residual level of all detected metals(13.70±14.70μg/kg ww in sum),while the lowest concentrations were observed in vegetables(0.53±0.17μg/kg ww in sum).Sn accounting for more than 50%of the total trace metals concentration in both terrestrial and aquatic animal origin foods.In terrestrial plant origin foods,Sn and Ir were the most abundant elements.Hf and Au were the most abundant elements in egg samples.In addition,Sb and Ir showed a clear trophic dilution effect in terrestrial environments,while in aquatic ecosystems,Sn,Hf,and Au exhibited obvious trophic amplification effects.The calculated average estimated daily intake(EDI)via food consumption in five regions of China was 0.09μg/(kg·day),implying the health risk of aforementioned elements was acceptable.

关键词： Trace metals Accumulation characteristics Dietary exposure Estimated daily intake(EDI)

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Blockade of CD300A enhances the ability of human NK cells to lyse hematologic malignancies

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Cancer Biology & Medicine 2024年第4期21卷 331-346页

作者： Shuangcheng Li Tianci Wang Xinghui Xiao Xiaodong zheng Haoyu sun Rui sun Hongdi Ma Zhigang Tian Xiaohu zheng Hefei National Research Center for Physical Sciences at Microscale The CAS Key Laboratory of Innate Immunity and Chronic DiseaseSchool of Basic Medical SciencesCenter for Advanced Interdisciplinary Science and Biomedicine of IHMDivision of Life Sciences and MedicineUniversity of Science and Technology of ChinaHefei 230027China Institute of Immunology University of Science and Technology of ChinaHefei 230027China Hefei TG ImmunoPharma Corporation Limited Hefei 230601China Research Unit of NK Cell Study Chinese Academy of Medical SciencesBeijing 100864China Key Laboratory of Quantitative Synthetic Biology Shenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen 518055China

Objective: The human cluster of differentiation(CD)300A, a type-I transmembrane protein with immunoreceptor tyrosine-based inhibitory motifs, was investigated as a potential immune checkpoint for human natural killer(NK) cells targeting hematologic malignancies(HMs).Methods: We implemented a stimulation system involving the CD300A ligand, phosphatidylserine(PS), exposed to the outer surface of malignant cells. Additionally, we utilized CD300A overexpression, a CD300A blocking system, and a xenotransplantation model to evaluate the impact of CD300A on NK cell efficacy against HMs in in vitro and in vivo settings. Furthermore, we explored the association between CD300A and HM progression in patients.Results: Our findings indicated that PS hampers the function of NK cells. Increased CD300A expression inhibited HM lysis by NK cells. CD300A overexpression shortened the survival of HM-xenografted mice by impairing transplanted NK cells. Blocking PS–CD300A signals with antibodies significantly amplified the expression of lysis function-related proteins and effector cytokines in NK cells, thereby augmenting the ability to lyse HMs. Clinically, heightened CD300A expression correlated with shorter survival and an “exhausted” phenotype of intratumoral NK cells in patients with HMs or solid tumors.Conclusions: These results propose CD300A as a potential target for invigorating NK cell-based treatments against HMs.

关键词： NK cell CD300A phosphatidylserine immune checkpoint hematologic malignancy

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QAR Data Imputation Using Generative Adversarial Network with Self-Attention Mechanism

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Big Data Mining and Analytics 2024年第1期7卷 12-28页

作者： Jingqi Zhao Chuitian rong Xin Dang Huabo sun School of Computer Science and Technology Tiangong UniversityTianjin 300387China Institute of Aviation Safety China Academy of Civil Aviation Science and TechnologyBeijing 100028China

Quick Access Recorder(QAR),an important device for storing data from various flight parameters,contains a large amount of valuable data and comprehensively records the real state of the airline flight.However,the recorded data have certain missing values due to factors,such as weather and equipment anomalies.These missing values seriously affect the analysis of QAR data by aeronautical engineers,such as airline flight scenario reproduction and airline flight safety status assessment.Therefore,imputing missing values in the QAR data,which can further guarantee the flight safety of airlines,is crucial.QAR data also have multivariate,multiprocess,and temporal features.Therefore,we innovatively propose the imputation models A-AEGAN("A"denotes attention mechanism,"AE"denotes autoencoder,and"GAN"denotes generative adversarial network)and SA-AEGAN("SA"denotes self-attentive mechanism)for missing values of QAR data,which can be effectively applied to QAR data.Specifically,we apply an innovative generative adversarial network to impute missing values from QAR data.The improved gated recurrent unit is then introduced as the neural unit of GAN,which can successfully capture the temporal relationships in QAR data.In addition,we modify the basic structure of GAN by using an autoencoder as the generator and a recurrent neural network as the discriminator.The missing values in the QAR data are imputed by using the adversarial relationship between generator and discriminator.We introduce an attention mechanism in the autoencoder to further improve the capability of the proposed model to capture the features of QAR data.Attention mechanisms can maintain the correlation among QAR data and improve the capability of the model to impute missing data.Furthermore,we improve the proposed model by integrating a self-attention mechanism to further capture the relationship between different parameters within the QAR data.Experimental results on real datasets demonstrate that the model can reasonably impute the missing values in QAR data wi

关键词： multivariate time series data imputation self-attention Generative Adversarial Network(GAN)

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Eat at the right time: Regulation of ER-phagy receptors in plant response to environmental stresses

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Molecular Plant 2024年第2期17卷 236-239页

作者： Yang Shao Jiaqi sun Huanquan zheng The Key Laboratory of Plant Development and Environmental Adaptation Biology Ministry of EducationSchool of Life SciencesShandong UniversityQingdao 266237China Department of Biology McGill UniversityMontrealQC H3A 1B1Canada

The endoplasmic reticulum(ER)is a cellular factory for biosynthesis of proteins and lipids.To accommodate a wide array of biosynthetic demands in responses to environmental stresses,the plant ER remodels to maintain a structural and functional homeostasis.A key process facilitating this balance is selective autophagy of the ER(ER-phagy),where malfunctioned ER is recognized,engulfed by autophagosomes,and then delivered to the vacuole for degradation.

关键词： maintain accommodate function

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