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Down-scaled regional ocean modeling system (ROMS) for high-resolution coastal hydrodynamics in Korea

Acta Oceanologica Sinica 2013年第9期32卷 50-61页

作者： LIM Hak-Soo kim Chang S PARK Kwang-soon SHIM jae Seol CHUN Insik Korea Institute of Ocean Science and Technology Konkuk University

A down-scaled operational oceanographic system is developed for the coastal waters of Korea using a re- gional ocean modeling system （ROMS）. The operational oceanographic modeling system consists of at- mospheric and hydrodynamic models. The hydrodynamic model, ROMS, is coupled with wave, sediment transport, and water quality modules. The system forecasts the predicted results twice a day on a 72 h basis, including sea surface elevation, currents, temperature, salinity, storm surge height, and wave information for the coastal waters of Korea. The predicted results are exported to the web-GIS-based coastal informa- tion system for real-time dissemination to the public and validation with real-time monitoring data using visualization technologies. The ROMS is two-way coupled with a simulating waves nearshore model, SWAN, for the hydrodynamics and waves, nested with the meteorological model, WRE for the atmospheric surface forcing, and externally nested with the eutrophication model, CE-QUAL-ICM, for the water quality. The op- erational model, ROMS, was calibrated with the tidal surface observed with a tide-gage and verified with current data observed by bottom-mounted ADCP or AWAC near the coastal waters of Korea. To validate the predicted results, we used real-time monitoring data derived from remote buoy system, HF-radar, and geostationary ocean color imager （GOCI）. This down-scaled operational coastal forecasting system will be used as a part of the Korea operational oceanographic system （KOOS） with other operational oceanographic systems.

关键词： down-scaled operational oceanographic system regional ocean modeling system wave coupledmodel real-time monitoring system

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Assessing vulnerability of forests to climate change in South Korea

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Journal of Forestry Research 2016年第3期27卷 489-503页

作者： Guishan Cui Hanbin Kwak Sungho Choi Moonil kim Chul-Hee Lim Woo-Kyun Lee Joon-soon kim Yeora Chae Department of Geography Yanbian University Department of Environmental Science and Ecological Engineering Korea University Department of Earth and Environment Boston University College of Forest and Environmental Science Kangwon National University Division of Adaptation Research Korea Environment Institute

This study demonstrated a framework to assess vulnerability of forests to climate change. We focused on how alterations of temperature and precipitation might affect forest type distributions and carbon-related functions. In particular, our framework considered three sectors of forest type distribution, net primary production, and soil carbon storage. Future projections were derived from mechanistic models for South Korean forests under the A1 B scenarios of the intergovernmental panel on climate change. Forest type distributions were simulated by the Hydrological and thermal analogy group model, while the MAPSS and CENTURY1 models estimated forest carbon flux/storage. We quantified normalized vulnerability indices for each sector. Our results indicate that the overall vulnerability of forest type distribution is greater in the west central regions and southeastern inlands. The vulnerabilities of carbon flux/storage show that net primary production of South Korean forests is relatively less susceptible to climate change, but a highly vulnerable area of soil carbon storage mainly spreads from the west central to the south east region. The spatio-temporal vulnerability map with a synoptic overview from this study might be useful for policy makers in preparing adaptive measures and identifying management priorities.

关键词： Vulnerability Forest Climate change Forest assessment

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Treatment satisfaction after I year high-power potassiumtitanyl-phosphate photoselective vaporization of the prostate

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Asian Journal of Andrology 2010年第5期12卷 728-734页

作者： ja Hyeon Ku Min Chul Cho Hyeong Seok kim jae-Seung Paick Soo Woong kim Department of Urology Seoul National University Hospital Seoul 100-744 Korea

To investigate the factors that influence treatment satisfaction after high-power potassium-titanyl-phosphate （KTP） laser vaporization of the prostate, we compared the characteristics between patients who were satisfied and those who were not satisfied. In all, 97 patients aged between 53-82 years （median age 67 years） underwent high-power KTP laser vaporization of the prostate for lower urinary tract symptoms due to benign prostatic hyperplasia. At 12 months postoperatively, 60 patients were satisfied with the treatment, whereas 37 were dissatisfied. Although there were no differences in International Prostate Symptom Score （IPSS） values at baseline, the satisfied group scored better in total IPSS at 1, 3, 6, and 12 months postoperatively （P 〈 0.05）. At baseline, the maximum flow rate （Qmax） was lower in the dissatisfied group and remained low throughout the follow-up period, with the exception of 1 month postoperatively （P 〈 0.05）, compared with the satisfied group. There were no differences in other objective data between the two groups, including post-void residual and the number of voids based on the frequency-volume charts. In a multivariate model, a higher bladder contractility index was associated with a greater likelihood of treatment satisfaction 12 months after high-power KTP laser vaporization （odds ratio 1.024, 95% confidence interval 1.001-1.048, P 〈 0.05）. Patients who were not satisfied following the surgery had a smaller improvement in subjective symptoms and Qmax. In addition, our findings suggest that the relative risk of treatment dissatisfaction following high-power KTP laser vaporization was increased in patients with weak detrusor contractility.

关键词： benign prostatic hyperplasia potassium-titanyl-phosphate prostate satisfaction vaporization

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Prognosis of hepatocellular carcinoma expressing cytokeratin 19:Comparison with other liver cancers

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World Journal of Gastroenterology 2012年第34期18卷 4751-4757页

作者： Jung Il Lee Jin-Woo Lee Joon Mee kim ja Kyung kim Hyun Jung Chung Young Soo kim Department of Internal Medicine School of MedicineInha UniversityIncheon 400-711South Korea Department of Pathology School of MedicineInha UniversityIncheon 400-711South Korea Department of Internal Medicine Yonsei University College of MedicineGangnam Severance HospitalSeoul 135-720South Korea

AIM:To investigate whether expressing biliary phenotype predicted poor outcome after the surgical treatment in primary liver cancers. METHODS:Out of 204 patients that underwent liver resection due to hepatocellular carcinoma (HCC), liver specimens of 70 patients with HCC were evaluated for biliary components by cytokeratin (CK) 19 immunostain (CK19 - HCC and CK19 + HCC). CK19 positivity was defined as membranous and/or cytoplasmic expression in ≥ 5% of tumor cells with moderate or strong intensity. Patients with other primary liver cancers, such as com- bined HCC and cholangiocarcinoma (cHCC-CC), intrahe- patic cholangiocarcinoma (ICC) who received curative liver resection, were also included in the study. Clinical characteristics of CK19-HCC and CK19 + HCC patients, including survival outcome after curative liver resection, were compared with that of cHCC-CC and ICC patients. RESULTS: The overall survival (OS) rate of CK19 - HCC(n = 49) after the curative surgical treatment was 90.7%, and 80.4% at 1 and 5 years after the resection. OS rate of CK19 + HCC (n = 21) was 74.3%, 28.9% and OS rate of cHCC-CC (n = 22) was 66.7%, 32.2% at 1 and 5 years after the surgery. For ICC (n = 19), 1 and 5-year-OS rate was 50.2% and 14.3% after the cura-tive resection. The OS rates of CK19 + HCC and cHCC-CC were significantly lower than that of CK19-HCC, but higher than the OS rate of ICC (P = 0.000). There was no statistically significant difference in OS rate between CK19 + HCC and cHCC-CC. The disease free survival (DFS) rate of CK19-HCC was 72.0% and 54.5% at 1 and 3 years after the surgical treatment. DFS rate of CK19 + HCC was 53.3%, 34.3% and DFS rate of cHCC- CC was 51.5%, 39.2% at 1 and 3 years after the resection. For ICC, 1 and 3-year-DFS rate was 28.0% and 14.0% after the curative resection. DFS rate of CK19-HCC was significantly higher than that of ICC (P = 0.017), but marginally higher than DFS rate of either CK19 + HCC or cHCC-CC (P = 0.097, P = 0.089, respec-tively).

关键词： Cytokeratin 19 Hepatocellular carcinoma Intrahepatic cholangiocarcinoma Liver cancers Hepa-tectomy

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An Efficient Viewport-Dependent 360 VR System Based on Adaptive Tiled Streaming

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Computers, Materials & Continua 2021年第3期66卷 2627-2643页

作者： Tuan Thanh Le Jong-Beom Jeong Sang soon Lee jaehyoun kim Eun-Seok Ryu Department of Computer Engineering Gachon UniversitySeongnam13120Korea Department of Computer Education Sungkyunkwan UniversitySeoul03063Korea

Recent advances in 360 video streaming technologies have enhanced the immersive experience of video streaming ***,there is immense potential for the application of 360 video encoding formats to achieve highly immersive virtual reality(VR)***,360 video streaming requires considerable bandwidth,and its performance depends on several ***,the optimization of 360 video bitstreams according to viewport texture is ***,we propose an adaptive solution for VR systems using viewport-dependent tiled 360 video *** increase the degrees of freedom of users,the moving picture experts group(MPEG)recently defined three degrees plus of freedom(3DoF+)and six degrees of freedom(6DoF)to support free user movement within camera-captured *** proposed method supports 6DoF to allow users to move their heads ***,we propose viewport-dependent tiled 360 video streaming based on users’head *** proposed system generates an adaptive bitstream using tile sets that are selected according to a parameter set of user’s viewport *** extracted bitstream is then transmitted to the user’s *** decoding,the user’s viewport is generated and rendered on VR head-mounted display(HMD).Furthermore,we introduce certain approaches to reduce the motion-to-photon *** experimental results demonstrated that,in contrast with non-tiled streaming,the proposed method achieved high-performance 360 video streaming for VR systems,with a 25.89%BD-rate saving for Y-PSNR and 61.16%for decoding time.

关键词： Virtual reality 360 video MPEGimmersive 6DoF MCTS viewportdependent

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Promoter hypomethylation and reactivation of MAGE-A1 and MAGE-A3 genes in colorectal cancer cell lines and cancer tissues

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World Journal of Gastroenterology 2006年第35期12卷 5651-5657页

作者： Kyung-Hee kim Jin-Sung Choi Il-Jin kim ja-Lok Ku jae-Gahb Park Laboratory of Cell Biology Korean Cell Line Bank Cancer Research Institute Seoul National University College of Medicine Seoul 110-744 Korea Laboratory of Cell Biology Korean Cell Line Bank Cancer Research Institute Seoul National University College of Medicine Seoul 110-744

AIM： To verify the expression and methylation status of the MAGE-A1 and MAGE-A3 genes in colorectal cancer tissues and cancer cell lines. METHODS： We evaluated promoter demethylation status of the MAGE-A1 and MAGE-A3 genes by RT-PCR analysis and methylation-specific PCR （MS-PCR）, as well as sequencing analysis, after sodium bisulfite modification in 32 colorectal cancer cell lines and 87 cancer tissues. RESULTS： Of the 32 cell lines, MAGE-A1 and MAGE-A3 expressions were observed in 59% and 66%, respectively. Subsequent to sodium bisulfite modification and MSPCR analysis, the promoter hypomethylation of MAGE-A1 and MAGE-A3 was confirmed in both at 81% each. Promoter hypomethylation of MAGE-A1 and MAGE-A3 in colorectal cancer tissues was observed in 43% and 77%, respectively. Hypomethylation of MAGE-A1 and MAGE-A3 genes in corresponding normal tissues were observed in 2% and 6%, respectively. CONCLUSION： The promoter hypomethylation of MAGE genes up-regulates its expression in colorectal carcinomas as well as in gastric cancers and might play a significant role in the development and progression of human colorectal carcinomas.

关键词： MAGE-A1 MAGE-A3 Promoter Hypomethylation Colorectal cancer

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Long-term performance of fiber-grid-reinforced asphalt overlay pavements: A case study of Korean national highways

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Journal of Traffic and Transportation Engineering(English Edition) 2019年第4期6卷 366-382页

作者： Jong-Hoon Lee Seung-Beom Baek Kang-Hoon Lee Jo-soon kim Jin-Hoon Jeong Department of Civil Engineering Inha UniversityIncheon 22212South Korea Civil&Environmental BG Doosan Engineering&ConstructionSeoul 06057South Korea Department of Infrastructure Safety Research Korea Institute of Civil Engineering and Building TechnologyGoyang-si 10223South Korea SN Construction Co. LtdDaejeon 34573South Korea

The objective of this study was to verify the effect of fiber grid reinforcement on the longterm performance of asphalt overlay pavements by performing field investigation, laboratory test, and finite element analysis. Crack, rutting, roughness, and other miscellaneous distresses of fiber-grid-reinforced overlay sections and ordinary overlay sections were compared. Pavement conditions of fiber grid overlay sections before and after the overlay were also compared. Cores were obtained from the fiber-grid-reinforced and ordinary sections to measure bonding shear strength between the intermediate and overlay *** energy, displacement after yield, and shear stiffness of the cores were also obtained by analyzing the test results. Finite element analysis was performed by using the test results to validate the effect of the fiber grid reinforcement on the long-term performance of asphalt overlay pavements. Rutting and fatigue cracking were predicted for three cases: 1) fiber grid was not used;2) glass fiber grid was used;and 3) carbon fiber grid was used. The cracking ratio of fiber-grid-reinforced sections was much smaller than that of ordinary sections. The results of field investigation, laboratory test, and finite element analysis showed that the fiber grid reinforcement improved the long-term performance of asphalt overlay pavements.

关键词： Asphalt pavement Fiber grid reinforcement Overlay pavement Finite element analysis Bonding shear strength

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Report of a Dicephalic Steppes Ratsnake (Elaphe dione) Collected in South Korea

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Asian Herpetological Research 2013年第3期4卷 182-186页

作者： Il-Hun kim ja-Kyeong kim Jonathan J.FONG Daesik PARK Department of Biology Kangwon National University School of Biological Sciences Seoul National University Division of Science Education Kangwon National University

In this report, we describe morphological characteristics of a dicephalic Steppes Ratsnake （Elaphe dione） collected from the wild in 2011 in South Korea. The specimen has two heads and two long necks. Unlike normal individuals, the dicephalic snake has divided ventral scales under the necks of the bifurcated columns. The snout- vent length （SVL） and overall total length of the individual are shorter than those of normal snakes of the same age. Nevertheless, the counts of nine different scale types that are often used for classification are all within the ranges of normal individuals. As far as we know, this is the first detailed morphological description of a dicephalic E. dione in the scientific literature.

关键词： dicephalism morphology Steppes Ratsnake Elaphe dione

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Rice pollen-specific OsRALF17 and OsRALF19 are essential for pollen tube growth

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植物学报:英文版 2023年第9期65卷 2218-2236页

作者： Eui‐Jung kim Ji‐Hyun kim Woo‐Jong Hong Eun Young kim Myung‐Hee kim Su Kyoung Lee Cheol Woo Min Sun Tae kim soon Ki Park Ki‐Hong Jung Yu‐Jin kim Graduate School of Green Bio‐Science&Crop Biotech Institute Kyung Hee UniversityYongin 17104Republic of Korea Department of Life Science and Environmental Biochemistry Life and Industry Convergence Research InstitutePusan National UniversityMiryang 50463Republic of Korea Department of Smart Farm Science Kyung Hee UniversityYongin 17104Republic of Korea School of Applied Biosciences Kyungpook National UniversityDaegu 41566Republic of Korea Genomics Division Department of Agricultural Bio‐ResourcesNational Institute of Agricultural SciencesRural Development AdministrationJeonju 54874Republic of Korea Department of Plant Bioscience Pusan National UniversityMiryang 50463Republic of Korea Research Center for Plant Plasticity Seoul National UniversitySeoul 08826Republic of Korea

Pollen tube growth is essential for successful double fertilization, which is critical for grain yield in crop plants. Rapid alkalinization factors(RALFs) function as ligands for signal transduction during fertilization. However, functional studies on RALF in monocot plants are ***, we functionally characterized two pollen-specific RALFs in rice(Oryza sativa) using multiple clustered regularly interspaced palindromic repeats(CRISPR)/CRISPR-associated protein 9-induced loss-of-function mutants,peptide treatment, expression analyses, and tag reporter lines. Among the 41 RALF members in rice, OsRALF17 was specifically expressed at the highest level in pollen and pollen *** applied OsRALF17 or OsRALF19peptide inhibited pollen tube germination and elongation at high concentrations but enhanced tube elongation at low concentrations, indicating growth regulation. Double mutants of OsRALF17 and OsRALF19(ralf17/19) exhibited almost full male sterility with defects in pollen hydration, germination, and tube elongation,which was partially recovered by exogenous treatment with OsRALF17 peptide. This study revealed that two partially functionally redundant OsRALF17 and OsRALF19 bind to Oryza sativa male-gene transfer defective 2(OsMTD2) and transmit reactive oxygen species signals for pollen tube germination and integrity maintenance in rice. Transcriptomic analysis confirmed their common downstream genes, in osmtd2 and ralf17/19. This study provides new insights into the role of RALF, expanding our knowledge of the biological role of RALF in regulating rice fertilization.

关键词： CRISPR-Cas9 CrRLK1L monocot Oryza sativa pollen tube growth rapid alkalinization factor(RALF)

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Comparison of sequential and 7-,10-,14-d triple therapy for Helicobacter pylori infection

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World Journal of Gastroenterology 2012年第19期18卷 2377-2382页

作者： Hyuk soon Choi Hoon jai Chun Sang Hoon Park Bora Keum Yeon Seok Seo Yong Sik kim Yoon-Tae Jeen soon Ho Um Hong Sik Lee Chang Duck kim Ho Sang Ryu Division of Gastroenterology and Hepatology Department of Internal MedicineInstitute of Digestive Disease and NutritionKorea University College of MedicineSeoul 136-705South Korea

AIM:To compare the effectiveness of sequential therapy for Helicobacter pylori(***) infection with that of triple therapy of varying ***:The 460 patients enrolled in this study had ***-associated gastritis or a gastric or duodenal *** screening,***-infected patients were randomly assigned to receive either conventional triple therapy for 7,10 or 14 d,or a new 10-d sequential *** of the 4 treatment groups included 115 *** outcomes of eradication therapy were assessed 4 wk after treatment by the urea breath test and ***:The overall eradication rate was 81.0%,and eradication rates were 75.7% for 7-d conventional triple therapy,81.9% for 10-d conventional triple therapy,84.4% for 14-d conventional triple therapy,and 82.0% for 10-d sequential *** intention-to-treat analysis nor per protocol analysis showed significant differences in eradication rates using sequential therapy or the standard triple therapy(P = 0.416 and P = 0.405,respectively).CONCLUSION:There are no significant differences between 10-d sequential eradication therapy for *** and any duration of standard triple treatment in Korean patients.

关键词： He/icobacter pylori Sequential therapy Triple therapy Gastric ulcer Duodenal ulcer Gastritis

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