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Incorporating the mutational landscape of SARS-COV-2 variants and case-dependent vaccination rates into epidemic models

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Infectious Disease Modelling 2022年第2期7卷 75-82页

作者： Mohammad Mihrab Chowdhury md rafiul islam md Sakhawat Hossain Nusrat Tabassum Angela Peace Department of Mathematics and Statistics Texas Tech UniversityLubbockTXUSA Department of Mathematics Iowa State UniversityAmesIAUSA

Coronavirus Disease(COVID-19),which began as a small outbreak in Wuhan,China,in December 2019,became a global pandemic within months due to its high *** the absence of pharmaceutical treatment,various non-pharmaceutical interventions(NPIs)to contain the spread of COVID-19 brought the entire world to a *** almost a year of seemingly returning to normalcy with the world's quickest vaccine development,the emergence of more infectious and vaccine resistant coronavirus variants is bringing the situation back to where it was a year *** the light of this new situation,we conducted a study to portray the possible scenarios based on the three key factors:impact of interventions(pharmaceutical and NPIs),vaccination rate,and vaccine *** our study,we assessed two of the most crucial factors,transmissibility and vaccination rate,in order to reduce the spreading of COVID-19 in a simple but effective *** order to incorporate the time-varying mutational landscape of COVID-19 variants,we estimated a weighted transmissibility composed of the proportion of existing strains that naturally vary over ***,we consider time varying vaccination rates based on the number of daily new *** method for calculating the vaccination rate from past active cases is an effective approach in forecasting probable future scenarios as it actively tracks people's attitudes toward immunization as active case *** simulations show that if a large number of individuals cannot be vaccinated by ensuring high efficacy in a short period of time,adopting NPIs is the best approach to manage disease transmission with the emergence of new vaccine breakthrough and more infectious variants.

关键词： Break-through variants Waning immunity Reinfection Non-pharmaceutical interventions(NPIs) Vaccination rate

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Seasonal influence of freshwater discharge on spatio-temporal variations in primary productivity, sea surface temperature, and euphotic zone depth in the northern Bay of Bengal

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Acta Oceanologica Sinica 2024年第6期43卷 1-14页

作者： Hafez Ahmad Felix Jose md.Simul Bhuyan md.Nazrul islam Padmanava Dash Geosystems Research Institute/Department of Geosciences Mississippi State UniversityStarkville 39759USA Department of Oceanography University of ChittagongChittagong 4331Bangladesh Department of Marine&Earth Sciences Florida Gulf Coast UniversityFort Myers 33965USA Bangladesh Oceanographic Research Institute Cox’s Bazar 4730Bangladesh Faculty of Marine Sciences&Fisheries Institute of Marine SciencesUniversity of ChittagongChittagong 4331Bangladesh Department of Geography and Environment Jahangirnagar UniversityDhaka 1342Bangladesh Department of Geosciences Mississippi State UniversityStarkville 39759USA

Ocean productivity is the foundation of marine food web,which continuously removes atmospheric carbon dioxide and supports life at sea and on ***-temporal variability of net primary productivity(NPP),sea surface temperature(SST),sea surface salinity(SSS),mixed layer depth(MLD),and euphotic zone depth(EZD) in the northern B ay of Bengal(BoB) during three monsoon seasons were examined in this study based on remote sensing data for the period 2005 to *** compare the NPP distribution between the coastal zones and open BoB,the study area was divided into five zones(Z1-Z5).Results suggest that most productive zones Z2 and Zl are located at the head bay area and are directly influenced by freshwater discharge together with riverine sediment and nutrient *** Z1-Z5,the NPP ranges from 5 315.38 mg/(m^(2)·d) to 346.7 mg/(m^(2)·d)(carbon,since then the same).The highest monthly average NPP of 5 315.38 mg/(m^(2)·d) in February and 5 039.36 mg/(m^(2)·d) in June were observed from Z2,while the lowest monthly average of 346.72 mg/(m^(2)·d) was observed in March from Z4,which is an oceanic *** values vary from 6-154 m for the study area,and it has an inverse correlation with NPP *** is deeper during the summer season and shallower during the wintertime,with a corresponding increase in *** the year,monthly SST shows slight fluctuation for the entire study area,and statistical analysis shows a significant correlation among NPP,and EZD,overall positive between NPP and MLD,whereas no significant correlation among SSS,and SST for the northern ***-term trends in SST and productivity were significantly po sitive in head bay zones but negatively productive in the open *** findings in this study on the distribution of NPP,SST,SSS,MLD,and EZD and their seasonal variability in five different zones of BoB can be used to further improve the management of marine resources and overall environmental condition in response to clim

关键词： chlorophyll a sea surface temperature euphotic zone depth primary productivity Ganges-Brahmaputra ocean color Bay of Bengal monsoon

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Review of coastal land transformation:Factors,impacts,adaptation strategies,and future scopes

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Geography and Sustainability 2024年第2期5卷 167-178页

作者： md.Abubakkor Siddik Abu Reza md.Towfiqul islam Dr.Wazed Research and Training Institute Begum Rokeya UniversityRangpur 5404Bangladesh Department of Emergency Management Patuakhali Science and Technology UniversityPatuakhali-8602Bangladesh Department of Disaster Management Begum Rokeya UniversityRangpur 5404Bangladesh Department of Development Studies Daffodil International UniversityDhaka 1216Bangladesh

Coastal land transformation has been identified as a topic of research in many countries around the *** studies have been conducted to determine the causes and impacts of land ***,much less is understood about coupling change detection,factors,impacts,and adaptation strategies for coastal land transformation at a global *** review aims to present a systematic review of global coastal land transformation and its leading research *** 1,741 documents of Scopus and Web of Science,60 studies have been selected using the PRISMA-2020 *** revealed that existing literature included four leading focus areas regarding coastal land transformation:change detection,driving factors,impacts,and adaptation *** focus areas were further analyzed,and it was found that more than 80%of studies used Landsat imagery to detect land *** growth and urbanization were among the major driving factors *** review further identified that about 37%of studies included impact *** studies identified impacts on ecosystems,land surface temperature,migration,water quality,and occupational effects as significant ***,only four studies included adaptation *** review explored the scope of comprehensive research in coastal land transformation,addressing change detection,factor and impact analysis,and mitigation-adaptation *** research also proposes a conceptual framework for comprehensive coastal land transformation *** framework can provide potential decision-making guidance for future studies in coastal land transformation.

关键词： Coastal land transformation Land use and land cover Landsat Population PRISMA

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Reservoir quality of the Late Cretaceous Volador Formation of the Latrobe group,Gippsland Basin,Australia:Implications from integrated analytical techniques

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Energy Geoscience 2024年第1期5卷 121-140页

作者： Kamalia Norjannah Kamalrulzaman Mohamed Ragab Shalaby md Aminul islam Department of Geosciences Faculty of ScienceUniversiti Brunei DarussalamBrunei Darussalam Geology Department Faculty of ScienceTanta UniversityTanta31527Egypt

Increasing demand for energy due to the populous Eastern Australia has driven oil and gas industries to find new sources of hydrocarbons as they are the primary energy *** study has been done on the Volador Formation in the Gippsland Basin by means of core-based petrophysical,sedimentological,and petrographic analyses as well as well log-based interpretation and capillary pressure *** wells from Kipper,Basker and Tuna fields with available dataset were investigated in this study:Kipper-1,Basker-1,Basker-2,Basker-5 and ***,the formation has good reservoir quality based on the high porosity and permeability values obtained through core and well log petrophysical *** formation made up of mostly moderate to coarse quartz grains that has experienced strong anti-compaction and is poorly *** and illite clays are seen dispersed in the rock formation,with the minority being mixed *** clays and diagenetic features including kaolinite cement and quartz overgrowth that can lead to porosity reduction only have insignificant impact on the overall reservoir *** addition,capillary pressure data shows that most samples are found in the transition to good reservoir zones(<50%saturation).The results obtained from this study have shown that the Volador Formation in the Gippsland Basin is worth for hydrocarbon exploration.

关键词： Volador formation Reservoir rock characterization Core-based Petrographic Well log based Capillary pressure

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Glucagon-like-peptide-1 receptor agonists and the management of type 2 diabetes-backwards and forwards

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World Journal of Diabetes 2024年第3期15卷 326-330页

作者： Michael Horowitz Lu Cai md Shahidul islam Department of Medicine University of AdelaideAdelaide 5005Australia Pediatric Research Institute University of LouisvilleLouisvilleKY 40202United States Department of Biochemistry School of Life SciencesUniversity of KwaZulu-NatalDurban 4000KwaZulu-NatalSouth Africa

This editorial is stimulated by the article by Alqifari et al published in the World Journal of Diabetes(2024).Alqifari et al focus on practical advice for the clinical use of glucagon-like-peptide-1(GLP-1)receptor agonists(GLP-1RAs)in the management of type 2 diabetes and this editorial provides complementary *** initially give a brief historical perspective of the development of GLP-1RAs stimulated by recognition of the‘incretin effect’,the substantially greater insulin increase to enteral when compared to euglycaemic intravenous glucose,and the identification of the incretin hormones,GIP and *** addition to stimulating insulin,GLP-1 reduces postprandial glucose levels by slowing gastric ***-1RAs were developed because native GLP-1 has a very short plasma *** majority of current GLP-1RAs are administered by subcutaneous injection once a *** are potent in glucose lowering without leading to hypoglycaemia,stimulate weight loss in obese individuals and lead to cardiovascular and renal *** landscape in relation to GLP-1RAs is broadening rapidly,with different formulations and their combination with other peptides to facilitate both glucose lowering and weight *** is a need for more information relating to the effects of GLP-1RAs to induce gastrointestinal symptoms and slow gastric emptying which is likely to allow their use to become more effective and personalised.

关键词： Glucagon-like-peptide-1 Glucose-dependent insulinotropic peptide Gastric emptying Type 2 diabetes

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Genome-wide identification,characterization and functional prediction of the SRS gene family in sesame(Sesamum indicum L.)

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Oil Crop Science 2024年第2期9卷 69-80页

作者： Farjana Afroz Susmi Tasmina islam Simi md Nahid Hasan md Abdur Rahim Department of Genetics and Plant Breeding Sher-e-Bangla Agricultural UniversityDhaka1207Bangladesh

Sesame(Sesamum indicum L.)is an ancient oilseed crop of the Pedaliaceae family with high oil content and potential health *** RELATED SEQUENCE(SRS)proteins are the transcription factors(TFs)specific to plants that contain RING-like zinc finger domain and are associated with the regulation of several physiological and biochemical *** also play vital roles in plant growth and development such as root formation,leaf development,floral development,hormone biosynthesis,signal transduction,and biotic and abiotic stress ***,the SRS gene family was not reported in sesame *** this study,identification,molecular characterization,phylogenetic relationship,cis-acting regulatory elements,protein-protein interaction,syntenic relationship,duplication events and expression pattern of SRS genes were analyzed in *** identified total six SiSRS genes on seven different linkage groups in the *** genome by comparing with the other species,including the model plant Arabidopsis *** SiSRS genes showed variation in their structure like2–5 exons and 1–4 *** other species,SiSRS proteins also contained‘RING-like zinc finger'and‘LRP1'***,the SiSRS genes were clustered into subclasses via phylogenetic analysis with proteins of ***,***,and some other plant *** cis-acting regulatory elements analysis revealed that the promoter region of SiSRS4(SIN_1011561)showed the highest 13 and 16 elements for light-and phytohormone-responses whereas,SiSRS1(SIN_1015187)showed the highest 15 elements for *** ABREs,or ABA-responsive elements,were found in a maximum of 8 copies in the SiSRS3(SIN 1009100).Moreover,the available RNA-seq based expression of SiSRS genes revealed variation in expression patterns between stress-treated and non-treated samples,especially in drought and salinity conditions *** SiSRS genes like SiSRS1(SIN_1015187)and SiSRS5(SIN_1021065),also exhibited variabl

关键词： SiSRS gene family SHI Transcription factor Characterization Sesamum indicum

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Vision Intelligence for Smart Sheep Farming: Applying Ensemble Learning to Detect Sheep Breeds

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ARTIFICIAL INTELLIGENCE IN AGRICULTURE 2024年第1期11卷 1-12页

作者： Himel, Galib Muhammad Shahriar islam, md. Masudul Rahaman, Mijanur Bangladesh Univ Business & Technol Dhaka Bangladesh

The ability to automatically recognize sheep breeds holds significant value for the sheep industry. Sheep farmers often require breed identification to assess the commercial worth of their flocks. However, many farmers specifically the novice one encounter difficulties in accurately identifying sheep breeds without experts in the field. Therefore, there is a need for autonomous approaches that can effectively and precisely replicate the breed identification skills of a sheep breed expert while functioning within a farm environment, thus providing considerable benefits the industry-specific to the novice farmers in the industry. To achieve this objective, we suggest utilizing a model based on convolutional neural networks (CNNs) which can rapidly and efficiently identify the type of sheep based on their facial features. This approach offers a cost-effective solution. To conduct our experiment, we utilized a dataset consisting of 1680 facial images which represented four distinct sheep breeds. This paper proposes an ensemble method that combines Xception, VGG16, InceptionV3, InceptionResNetV2, and DenseNet121 models. During the transfer learning using this pre-trained model, we applied several optimizers and loss functions and chose the best combinations out of them. This classification model has the potential to aid sheep farmers in precisely and efficiently distinguishing between various breeds, enabling more precise assessments of sector-specific classification for different businesses. (c) 2023 The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd. This is an open access article under the CC BY license (http://***/licenses/by/4.0/).

关键词： Computer vision Sheep breed classification Image processing Transfer learning Ensemble learning Meta learner

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Nonlinear Model Predictive Controller for Compensations of Single Line-to-ground Fault in Resonant Grounded Power Distribution Networks

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Journal of Modern Power Systems and Clean Energy 2024年第4期12卷 1113-1125页

作者： Warnakulasuriya Sonal Prashenajith Fernando Mostafa Barzegar-Kalashani md Apel Mahmud Shama Naz islam Nasser Hossenzadeh Faculty of Engineering and Environment Northumbria UniversityNewcastleUK School of Software and Electrical Engineering Swinburne University of TechnologyHawthornAustralia School of Engineering Deakin UniversityWaurn PondsAustralia

An nonlinear model predictive controller(NMPC)is proposed in this paper for compensations of single line-to-ground(SLG)faults in resonant grounded power distribution networks(RGPDNs),which reduces the likelihood of power line bushfire due to electric *** current compensation(RCC)inverters with arc suppression coils(ASCs)in RGPDNs are controlled using the proposed NMPC to provide appropri-ate compensations during SLG *** proposed NMPC is incorporated with the estimation of ASC inductance,where the estimation is carried out based on voltage and current measure-ments from the neutral point of the power distribution *** compensation scheme is developed in the discrete time using the equivalent circuit of *** proposed NMPC for RCC inverters ensures that the desired current is in-jected into the neutral point during SLG faults,which is veri-fied through both simulations and control hardware-in-the-loop(CHIL)*** results are also presented against an integral sliding mode controller(ISMC)by demon-strating the capability of power line bushfire mitigation.

关键词： Fault current phase voltage nonlinear model predictive controller(NMPC) parameter adaptation parametric uncertainty power line bushfire

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3D reservoir characterization of the Mangahewa Formation,Mangahewa Field,Taranaki Basin,New Zealand

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Energy Geoscience 2024年第2期5卷 152-170页

作者： Dk Nurulnazihah Pg Norsahminan md Aminul islam Surya Tejasvi Thota Mohamed Ragab Shalaby Department of Geosciences Faculty of ScienceUniversiti Brunei DarussalamJalan Tungku LinkGadong BE1410Brunei Darussalam

The Mangahewa Formation is the primary reservoir target in the Mangahewa Field in the Taranaki Basin,New *** formation is distinguished by its marginal marine substantial tight-sand reservoir,having thickness exceeding 800 *** aim of this study is to assess the reservoir properties of the Mangahewa Formation through 3D reservoir modeling,employing 3D seismic data,core data,and well data from the Mangahewa *** variance attributes,the faults and horizons have been identified successfully within the *** majority of the interpreted faults exhibit dip angles exceeding 60°,with a maximum displacement of 118 *** detect direct hydrocarbon indicators,root-mean-square amplitude seismic attribute,envelope,and generalized spectral decomposition techniques have been ***,four lithofacies,comprising 78.3%sandstone,9.2%siltstone,9.5%claystone,and 3.0%coal have been established by utilizing the Sequential Indicator Simulation(SIS)algorithm to create a lithofacies model.A property model has been generated using the Sequential Gaussian Simulation(SGS)*** evaluation indicates that the Mangahewa Formation exhibits reservoir qualities ranging from fair to good,with porosity levels between 8%and 11%,permeability averaging up to 10 md,variable shale volumes,and hydrocarbon saturation in the range of 40%-50%.This study's methodologies and findings can serve as a valuable foundation for similar investigations in other tightsand gas fields located in different regions.

关键词： Marginal marine Tight-sand reservoir Mangahewa formation Mangahewa gas-condensate field Northern taranaki basin

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Microstrip Patch Antenna with an Inverted T-Type Notch in the Partial Ground for Breast Cancer Detections

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Computer Modeling in Engineering & Sciences 2024年第2期138卷 1301-1322页

作者： Nure Alam Chowdhury Lulu Wang md Shazzadul islam Linxia Gu Mehmet Kaya Department of Biomedical Engineering and Science Florida Institute of TechnologyMelbourneFL 32901USA Biomedical Device Innovation Center Shenzhen Technology UniversityShenzhen518118China Department of Electrical and Computer Engineering International Islamic University MalaysiaJalan GombakSelangor53100Malaysia

This study designs a microstrip patch antenna with an inverted T-type notch in the partial ground to detect tumorcells inside the human *** size of the current antenna is small enough(18mm×21mm×1.6mm)todistribute around the breast *** operating frequency has been observed from6–14GHzwith a minimumreturn loss of−61.18 dB and themaximumgain of current proposed antenna is 5.8 dBiwhich is flexiblewith respectto the size of *** the distribution of eight antennas around the breast phantom,the return loss curveswere observed in the presence and absence of tumor cells inside the breast phantom,and these observations showa sharp difference between the presence and absence of tumor *** simulated results show that this proposedantenna is suitable for early detection of cancerous cells inside the breast.

关键词： Antenna microwave wideband cancer breast phantom tumor detection

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