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t-SNE:A study on reducing the dimensionality of hyperspectral data for the regression problem of estimating oenological parameters

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Artificial Intelligence in Agriculture 2023年第1期7卷 58-68页

作者： rui Silva Pedro Melo-pinto CITAB-Centre for the Research and Technology of Agro-Environmental and Biological Sciences Inov4Agro-Institute for InnovationCapacity Building and Sustainability of Agri-Food ProductionUniversidade de Trás-os-Montes e Alto DouroQuinta dos PradosVila Real 5000-801Portugal Departamento de Engenharias Escola de Ciências e TecnologiaUniversidade de Trás-os-Montes e Alto DouroQuinta dos PradosVila Real 5000-801Portugal

In recent years there is a growing importance in using machine learning techniques to improve procedures in precision agriculture:in this work we perform a study on models capable of predicting oenological parameters from hyperspectral images of wine grape berries,a specially relevant topic to boost production tasks for ***,we explore the capabilities of a novel technique mostly used for visualization,t-Distributed Stochastic Neighbor Embedding(t-SNE),for reducing the dimensionality of the highly complex hyperspectral data and compare its performance with Principal Component Analysis(PCA)method,which despite the introduction of many nonlinear dimensionality reduction techniques over the years,had achieved the best results for real-world data across several studies in *** we explore the potential of Kernel t-SNE,an extension to the t-SNE method that allows for the usage of the technique in streaming data or online *** results show that,in a direct comparison,t-SNE achieves better metrics than PCA for most of the data sets in this work and that the regressor(Support Vector Regression,SVR)performs better with the t-SNE reduced features as inputs,accomplishing better predictions with lower error *** the results with current literature,our shallow learning model paired with t-SNE achieves either better or on par results than those reported,even competing with more advanced models that use deep learning techniques,which should propel the introduction of t-SNE in more studies that require dimensionality reduction.

关键词： Hyperspectral images Dimensionality reduction Regression T-SNE Support vector machines Wine grape berries

Enabling data-driven anomaly detection by design in cyber-physical production systems

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Cybersecurity 2022年第3期5卷 34-51页

作者： rui pinto Gil Goncalves Jerker Delsing Eduardo Tovar Department of Informatics Engineering Faculty of EngineeringUniversity of PortoPortoPortugal EISLAB Lulea University of TechnologyLuleaSweden Research Centre in Real-Time and Embedded Computing Systems Polytechnic of Porto-School of EngineeringPortoPortugal

Designing and developing distributed cyber-physical production systems(CPPS)is a time-consuming,complex,and error-prone *** systems are typically heterogeneous,i.e.,they consist of multiple components implemented with different languages and development *** of the main problems nowadays in CPPS implementation is enabling security mechanisms by design while reducing the complexity and increasing the system’s *** the IEC 61499 standard is an excellent approach to tackle these challenges by enabling the design,deployment,and management of CPPS in a model-based engineering *** propose a method for CPPS design based on the IEC 61499 *** method allows designers to embed a bio-inspired anomaly-based host intrusion detection system(A-HIDS)in Edge *** A-HIDS is based on the incremental Dendritic Cell Algorithm(iDCA)and can analyze OPC UA network data exchanged between the Edge devices and detect attacks that target the CPPS’Edge *** study’s findings have practical implications on the industrial security community by making novel contributions to the intrusion detection problem in CPPS considering immune-inspired solutions,and cost-effective security by design system *** to the experimental data,the proposed solution can dramatically reduce design and code complexity while improving application maintainability and successfully detecting network attacks without negatively impacting the performance of the CPPS Edge devices.

关键词： Artificial immune systems Cyber-physical production systems IEC 61499 Function blocks Industrial Internet of Things Anomaly-based host intrusion detection system Model-based engineering

3D-printed aerogels as theranostic implants monitored by fluorescence bioimaging

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Bioactive Materials 2024年第11期41卷 471-484页

作者： Ana Iglesias-Mejuto rui pinto Pedro Faísca joséCatarino João Rocha Luisa Durães Maria Manuela Gaspar Catarina pinto Reis Carlos A.García-González AerogelsLab I+D Farma Group(GI-1645)Department of PharmacologyPharmacy and Pharmaceutical TechnologyFaculty of PharmacyiMATUS and Health Research Institute of Santiago de Compostela(IDIS)Universidade de Santiago de CompostelaE-15782Santiago de CompostelaSpain Research Institute for Medicines(iMed.ULisboa) Faculty of PharmacyUniversidade de LisboaAv.Professor Gama Pinto1649-003LisboaPortugal Joaquim Chaves Saúde Joaquim Chaves Laboratório de Análises ClínicasMiraflores1495069AlgésPortugal CECAV-Faculty of Veterinary Medicina-Lusófona University-Lisbon University Center Campo Grande 3761749-024LisboaPortugal Faculty of Veterinary Medicina-Lusófona University-Lisbon University Center Campo Grande 3761749-024LisboaPortugal University of Coimbra CERES-Chemical Engineering and Renewable Resources for SustainabilityDepartment of Chemical Engineering3030-790CoimbraPortugal Instituto de Biofísica e Engenharia Biomédica(IBEB) Faculdade de CiênciasUniversidade de LisboaCampo Grande1749-016LisboaPortugal

Aerogel scaffolds are nanostructured materials with beneficial properties for tissue engineering *** tracing of the state of the aerogels after their implantation is challenging due to their variable biodegradation rate and the lack of suitable strategies capable of in vivo monitoring the *** nanoparticles(UCNPs)have emerged as advanced tools for in vitro bioimaging because of their fluorescence *** this work,highly fluorescent UCNPs were loaded into aerogels to obtain theranostic implants for tissue engineering and bioimaging applications.3D-printed alginate-hydroxyapatite aerogels labeled with UCNPs were manufactured by 3D-printing and supercritical CO_(2) drying to generate personalize-to-patient *** physicochemical performance of the resulting structures was evaluated by printing fidelity measurements,nitrogen adsorption-desorption analysis,and different microscopies(confocal,transmission and scanning electron microscopies).Stability of the aerogels in terms of physicochemical properties was also tested after 3 years of *** was evaluated in vitro by different cell and hemocompatibility assays,in ovo and in vivo by safety and bioimaging studies using different murine *** profile,tissue index and histological evaluations of the main organs unveiled an in vivo downregulation of the inflammation after implantation of the ***-decorated aerogels were first-time manufactured and long-term traceable by fluorescence-based bioimaging until 3 weeks post-implantation,thereby endorsing their suitability as tissue engineering and theranostic nanodevices(*** implants).

关键词： Upconversion nanoparticles Aerogels Theranostic implants In vivo fluorescence

Diabetes mellitus and comorbidities in elderly people from the Lugu community:A critical-reflective analysis

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World Journal of Diabetes 2024年第11期15卷 2162-2166页

作者： joséCarlos Tatmatsu-Rocha joséCarlos Gomes-pinto College of Medicine Postgraduate Program in Physiotherapy and FunctionalityFederal University of Ceará-UFCFortaleza 60810-786Brazil College of Medicine Postgraduate Program in Physiotherapy and FunctionalityFederal University of CearáFortaleza 60000-000Brazil

Ageing has a close relationship with chronic non-communicable diseases,such as diabetes mellitus and high blood *** pathologies are often associated with changes in eating habits and promote crucial physiological changes which act silently in the long term in the elderly *** to the speed of urban development and technological advances,there has been an increase in the population's life ***,it is essential to know the socio-demographic profile and prevalent comorbidities of the elderly population,which can provide a reliable and broad database to enable the outline of strategies and the promotion of efficient health *** this sense,the purpose of this editorial is to contribute to the debate surrounding the article that analysed epidemiological data from the Lugu *** mellitus,hypertension and cardiovascular pathologies and their comorbidities were the most prevalent conditions in this *** data could contribute to develop public policies constructively and assertively,allowing investments in the prevention and treatment of these pathologies.

关键词： Diabetes mellitus Quality indicators Health care Hypertension Comorbidity Exercise

A Simulation of Market-based Non-frequency Ancillary Service Procurement Based on Demand Flexibility

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Journal of Modern Power Systems and Clean Energy 2023年第3期11卷 781-792页

作者： Ricardo Faia Fernando Lezama Tiago pinto Pedro Faria Zita Vale josé Manuel Terras Susete Albuquerque Research Group on Intelligent Engineering and Computing for Advanced Innovation and Development(GECAD) R.Dr.António Bernardino de Almeida4314249-015PortoPortugal E-REDES Distribuição de Eletricidade S.A.R.Camilo Castelo Branco43LisboaPortugal

This paper proposes a novel approach for the provision of non-frequency ancillary service(AS)by consumers connected to low-voltage distribution *** proposed approach considers an asymmetric pool-based local market for AS negotiation,allowing consumers to set a flexibility quantity and desired price to trade.A case study with 98 consumers illustrates the proposed market-based non-frequency AS provision ***,three different strategies of consumers’participation are implemented and tested in a real low-voltage distribution network with radial *** is shown that consumers can make a profit from the sale of their flexibility while contributing to keeping the network power losses,voltage,and current within pre-defined ***,the results demonstrate the value of AS coming directly from end-users.

关键词： Demand flexibility local electricity market ancillary service low-volatge distribution network

Mathematical simulation of radial heat transfer in packed beds by pseudohomogeneous modeling

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Particuology 2011年第2期9卷 107-113页

作者： Rodrigo Béttega Marcos Flávio pinto Moreira Ronaldo Guimaraes Corrêa josé Teixeira Freire Federal University of Uberlandia/School of Chemical Engineering-Av.Jo o Naves ávila 2121 Uberlandia-MGCEP 38400-902Brazil Western Paraná State University-Rua da Faculdade 645 Jardim La SalleToledo-PRCEP 85903-000Brazil Federal University of S o Carlos/Department of Chemical Engineering-Rod.Washington Luiz km 235 S o Carlos-SPCEP 13565-905P.O.Box 676Brazil

Uniform flow regime and constant effective thermal conductivity inside packed beds are commonly accepted in the evaluation of the fluid dynamics and heat transfer in such systems. However, several authors have confirmed the presence of an oscillatory velocity profile caused by the effective contribu~ tion of porosity profile in the fluid dynamic behavior of packed beds, which directly influences the heat transfer inside the beds. This paper describes the application of a pseudo-homogeneous mathematical model for describing heat transfer in packed beds with oscillatory profiles of velocity and porosity, using a radius-dependent model for effective thermal conductivity kr. Several temperature profiles were obtained in a packed bed system with thermal source located on the wall. The simulated temperature and effective thermal conductivity obtained from simulations were compared with experimental data and calculation from a model based on uniform kr fitting. The results indicate that the proposed mathematical modeling was capable of better reDresenting the heat transfer in the packed bed.

关键词： Packed bedHeat transferPseudohomogeneous modeling

Competition among rare earth elements on sorption onto six seaweeds

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Journal of Rare Earths 2021年第6期39卷 734-741,I0005页

作者： Joāo pinto Marcelo Costa Bruno Henriques joséSoares Mariana Dias Thainara Viana Nicole Ferreira Carlos Vale joséPinheiro-Torres Eduarda Pereira Department of Chemistry University of Aveiro3810-193 AveiroPortugal CESAM Department of ChemistryUniversity of Aveiro3810-193 AveiroPortugal LAQV-REQUIMTE Department of Chemistry&Central Laboratory of AnalysisUniversity of Aveiro3810-193 AveiroPortugal CIIMAR一Interdisciplinary Centre of Marine and Environmental Research MatosinhosPortugal N9VE-Nature Ocean and ValueLdaPortoPortugal Central Laboratory of Analysis University of Aveiro3810-193 AveiroPortugal

Sorption has been proposed as a promising approach towards a sustainable water decontamination and recently to the recycling of rare earth elements(REE).Although living seaweed have been shown to be capable of removing REE from contaminated solutions,no studies have yet compared the effects of REE competition on sorption onto different groups of *** effects were analysed in the present study by exposing six living seaweeds(Ulva lactuca,Ulva intestinalis,Fucus spiralis,Fucus vesiculosus,Gracilaria *** Osmundea pinnatifida)(3 g/L,fresh weight) to mono-element and multi-element solutions of Y,La,Ce,Pr,Nd,Eu,Gd,Tb and Dy(1 μmol/L).Results show a preference towards light REE in mono-element solutions,which is reduced when in competition with other *** competitive effect is less pronounced in heavy REE indicating that these are still able to bind to the macroalgae despite the presence of competing *** to water content(%),seaweed specific surface area(cm^(2)/g) shows to be an important factor in the sorption of REE,since larger surface area is associated with higher removal and larger competitive effect.

关键词： Bioaccumulation Wastewater e-waste Recovery Removal Marine macroalgae

Epstein-Barr virus is associated with gastric carcinoma: The question is what is the significance?

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World Journal of Gastroenterology 2008年第27期14卷 4347-4351页

作者： Hugo Sousa Ana L pinto-Correia rui Medeiros Mario Dinis-Ribeiro Molecular Oncology Group and Molecular Virology Laboratory Portuguese Institute of Oncology of Porto Gastroenterology Department Portuguese Institute of Oncology of Porto

AIM: To examine the possible role of the Epstein- Barr Virus (EBV) in the development of gastric adenocarcinoma (GC). It is unclear whether EBV is involved in GC development or is a consequence of gastric inflammation secondary to immunosuppressive treatments. METHODS: A systematic review was carried out of all published observational studies on the temporal association between EBV and GC, with a view to determine a causal relationship. RESULTS: The present study showed that the worldwide crude prevalence of EBV in gastric adenocarcinoma was 8.29%. The prevalence varied from 7.08% for intestinal type and 9.82% for diffuse type of GC. It was observed that Western and Central Asian countries had a significantly higher frequency of EBV positive cases compared to South-Eastern countries. America had the highest EBV-GC prevalence whereas Europe had the lowest. CONCLUSION: The present review has demonstrated a high prevalence of EBV in gastric adenocarcinoma. However, studies designed to assess a temporal relationship and histological association using sensitive techniques should be carried out to establish the role of EBV in GC carcinogenesis.

关键词： Epstein-Barr virus infection Gastric carcinoma Systematic review

A Novel Approach to Measuring Spatiotemporal Changes in Social Vulnerability at the Local Level in Portugal

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International Journal of Disaster Risk Science 2022年第6期13卷 842-861页

作者： Pedro pinto Santos joséLuís Zêzere Susana Pereira Jorge Rocha Alexandre Oliveira Tavares Centre for Geographical Studies Institute of Geography and Spatial PlanningTERRAUniversity of Lisbon(CEG-IGOT-ULisboa)1600-276 LisboaLAPortugal Centre for Social Studies Earth Science DepartmentScience and Technology FacultyUniversity of Coimbra(CES/DCT-FCT-UCoimbra)3000-995 CoimbraPortugal

Social vulnerability,as one of the risk components,partially explains the magnitude of the impacts observed after a *** this study,a spatiotemporally comparable assessment of social vulnerability and its drivers was conducted in Portugal,at the civil parish level,for three census *** first challenging step consisted of the selection of meaningful and consistent variables over *** were normalized using the Adjusted Mazziotta-Pareto Index(AMPI)to obtain comparable adimensional-normalized values.A joint principal component analysis(PCA)was applied,resulting in a robust set of variables,interpretable from the point of view of their self-grouping around vulnerability drivers.A separate PCA for each census was also conducted,which proved to be useful in analyzing changes in the composition and type of drivers,although only the joint PCA allows the monitoring of spatiotemporal changes in social vulnerability scores and drivers from 1991 to 2011.A general improvement in social vulnerability was observed for *** two main drivers are the economic condition(PC1),and aging and depopulation(PC2).The remaining drivers highlighted are uprooting and internal mobility,and daily *** data proved their value in the territorial,social,and demographic characterization of the country,to support medium-and long-term disaster risk reduction measures.

关键词： AMPI normalization Portugal Social vulnerability Spatiotemporal changes