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The numbers of fungi: is the descriptive curve flattening?

Fungal Diversity 2020年第4期103卷 219-271页

作者： Kevin D.Hyde Rajesh Jeewon Yi-Jyun Chen Chitrabhanu S.bhunjun Mark S.Calabon Hong-bo Jiang Chuan-Gen Lin Chada Norphanphoun Phongeun Sysouphanthong Dhandevi Pem Saowaluck Tibpromma Qian Zhang Mingkwan Doilom Ruvishika S.Jayawardena Jian-Kui Liu Sajeewa S.N.Maharachchikumbura Chayanard Phukhamsakda Rungtiwa Phookamsak Abdullah M.Al-Sadi Naritsada Thongklang Yong Wang Yusufjon Gafforov e.b.gareth jones Saisamorn Lumyong Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Innovative Institute of Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225People’s Republic of China CAS Key Laboratory for Plant Diversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius east and Central Asia Regional Office World Agroforestry Centre(ICRAF)Kunming 650201YunnanPeople’s Republic of China Center for Mountain Futures Kunming Institute of BotanyKunming 650201YunnanPeople’s Republic of China ecology Division Biotechnology and Ecology InstituteMinistry of Science and TechnologyP.O.Box:2279VientianeLao PDR Honghe Innovation Center for Mountain Futures Kunming Institute of BotanyChinese Academy of SciencesHonghe County 654400YunnanPeople’s Republic of China Department of Plant Pathology College of AgricultureGuizhou UniversityGuiyang 550025GuizhouPeople’s Republic of China School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Department of biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Research Center of Microbial Diversity and Sustainable Utilization Faculty of SciencesChiang Mai UniversityChiang Mai 50200Thailand Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniversityP.O.Box 34Al khoud123 MuscatOman Laboratory of Mycology Institute of BotanyAcademy of Sciences of the Republic of Uzbekistan32 Durmon Yuli StreetTashkent 100125Uzbekistan Department of ecology Andijan State University129 Universitet StreetAndijan 170100Uzbekistan Department of botany and Microbiology College of ScienceKing Saud UniversityP.O Box 2455Riyadh 11451Kingdom of Saudi A

The recent realistic estimate of fungal numbers which used various algorithms was between 2.2 and 3.8 *** are nearly 100,000 accepted species of Fungi and fungus-like taxa,which is between 2.6 and 4.5%of the estimated *** forums such as botanica Marina series,Fungal Diversity notes,Fungal biodiversity Profiles,Fungal Systematics and evolution-New and Interesting Fungi,Mycosphere notes and Fungal Planet have enhanced the introduction of new taxa and nearly 2000 species have been introduced in these publications in the last *** need to define a fungal species more accurately has been recognized,but there is much research needed before this can be better *** address the evidence that is needed to estimate the numbers of fungi and address the various advances that have been made towards its *** genera are barely known,whereas some plant pathogens comprise numerous species complexes and numbers are steadily *** this paper,we examine ten genera as case studies to establish trends in fungal description and introduce new species in each *** genera are the ascomycetes Colletotrichum and Pestalotiopsis(with many species or complexes),Atrocalyx,Dothiora,Lignosphaeria,Okeanomyces,Rhamphoriopsis,Thozetella,Thyrostroma(rela-tively poorly studied genera)and the basidiomycete genus *** provide examples where knowledge is incomplete or lacking and suggest areas needing further *** include(1)the need to establish what is a species,(2)the need to establish how host-specific fungi are,not in highly disturbed urban areas,but in pristine or relatively undisturbed forests,and(3)the need to establish if species in different continents,islands,countries or regions are different,or if the same fungi occur worldwide?Finally,we conclude whether we are anywhere near to flattening the curve in new species description.

关键词： 11 new taxa Atrocalyx Colletotrichum Dothiora fungal numbers Host-specificity Lepiota Lignosphaeria Okeanomyces Pestalotiopsis Rhamphoriopsis Thozetella Thyrostroma

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Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae

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Fungal Diversity 2018年第2期89卷 1-236页

作者： Dhanushka N.Wanasinghe Chayanard Phukhamsakda Kevin D.Hyde Rajesh Jeewon Hyang burm Lee e.b.gareth jones Saowaluck Tibpromma Danushka S.Tennakoon Asha J.Dissanayake Subashini C.Jayasiri Yusufjon Gafforov erio Camporesi Timur Sbulgakov Anusha Hekanayake Rekhani Hansika Perera Milan CSamarakoon Ishani DGoonasekara Ausana Mapook Wen-Jing Li Indunil CSenanayake Junfu Li Chada Norphanphoun Mingkwan Doilom Ali H bahkali Jianchu Xu Peter eMortimer Leif Tibell Sanja Tibell Samantha C.Karunarathna Key Laboratory for Plant Diversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius environmental Microbiology Lab Division of Food TechnologyBiotechnology&AgrochemistryCollege of Agriculture and Life SciencesChonnam National UniversityYongbong-Dong 300Buk-GuGwangju 61186Korea Nantgaredig 33 B St.Edwards Road Southsea HantsHampshire PO53DHUK Institute of Plant and environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Laboratory of Mycology Institute of BotanyAcademy of Sciences of the Republic of Uzbekistan32 Durmon Yuli StreetTashkentUzbekistan 100125 A.M.b.Gruppo Micologico Forlivese"Antonio Cicognani"Via Roma 18Forlı`Italy A.M.b Circolo Micologico"Giovanni Carini"C.P.314 BresciaItaly Societa`per gli Studi Naturalistici della Romagna C.P.144 BagnacavalloRAItaly Russian Research Institute of Floriculture and Subtropical Crops 2/28 Yana Fabritsiusa StreetSochiKrasnodar RegionRussia 354002 Department of biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand engineering Research Center of Southwest bioPharmaceutical Resources Ministry of EducationGuizhou UniversityGuiyang 550025GuizhouPeople’s Republic of China Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Department of Plant Medicine National Chiayi University300 Syuefu RoadChiayi City 60004Taiwan Department of ecology University of KasselHeinrich-PlettStrasse4034132 KasselGermany Department of Organismal biology Uppsala Univer

This paper is the seventh in the Fungal Diversity Notes series,where 131 taxa accommodated in 28 families are mainly described from Rosa(Rosaceae)and a few other *** fungal taxa are described in the present study,including 17 new genera,93 new species,four combinations,a sexual record for a species and new host records for 16 ***,Cycasicola,Dactylidina,embarria,Hawksworthiana,Italica,Melanocucurbitaria,Melanodiplodia,Monoseptella,Uzbekistanica,Neoconiothyrium,Neopaucispora,Pararoussoella,Paraxylaria,Marjia,Sporormurispora and Xenomassariosphaeria are introduced as new ascomycete *** also introduce the new species Absidia jindoensis,Alternaria doliconidium,***,Angustimassarina rosarum,Astragalicola vasilyevae,backusella locustae,bartalinia rosicola,bhatiellae rosae,broomella rosae,Castanediella camelliae,Coelodictyosporium rosarum,Comoclathris rosae,***,Comoclathris rosigena,Coniochaeta baysunika,***,Cycasicola goaensis,Dactylidina shoemakeri,Dematiopleospora donetzica,***,***,Diaporthe rosae,***,endoconidioma rosaehissaricae,epicoccum rosae,Hawksworthiana clematidicola,***,Italica achilleae,Keissleriella phragmiticola,***,***,***,Lophiostoma rosae,Marjia tianschanica,***,Melanocucurbitaria uzbekistanica,Melanodiplodia tianschanica,Monoseptella rosae,Mucor fluvius,Muriformistrickeria rosae,Murilentithecium rosae,Neoascochyta rosicola,Neoconiothyrium rosae,Neopaucispora rosaecae,Neosetophoma rosarum,***,***,Neostagonospora artemisiae,Ophiobolus artemisiicola,Paraconiothyrium rosae,Paraphaeosphaeria rosae,***,Pararoussoella rosarum,Parathyridaria rosae,Paraxylaria rosacearum,Penicillium acidum,***,Phragmocamarosporium rosae,Pleospora rosae,***-caninae,Poaceicola agrostina,***,***,Populocrescentia ammophilae,***,Pseudocamarosporium pteleae,***-minoris,Pseudocercospora rosae,Pseudopithomyces rosae,Pseudost

关键词： Ascomycota Dothideomycetes eurotiomycetes Italy Lecanoromycetes Mucoromycetes Phylogeny Rosa Rosaceae Russia Sordariomycetes Taxonomy UK Uzbekistan

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Freshwater fungal number

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Fungal Diversity 2022年第3期 3-235页

作者： Mark S.Calabon Kevin D.Hyde e.b.gareth jones Zong-Long Luo Wei Dong Vedprakash G.Hurdeal eleni Gentekaki Walter Rossi Marco Leonardi Vinodhini Thiyagaraja Anis S.Lestari Hong-Wei Shen Dan-Feng bao Nattawut boonyuen Ming Zeng Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Innovative Institute for Plant Health Zhongkai University of Agriculture and EngineeringGuangzhou 510225China Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Saudi Arabia College of Agriculture and biological Sciences Dali UniversityDali 671003China Department MeSVA Section Environmental SciencesUniversity of L’Aquila67100 CoppitoAQItaly Centre for Mountain Futures(CMF) CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia(KLPB)Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China CIFOR-ICRAF China Program World Agroforestry(ICRAF)Kunming 650201People’s Republic of China Department of entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand Research Center for biomaterials Research Organization for Life Sciences CenterNational Research and Innovation Agency(BRIN)Cibinong 16911Indonesia Plant-Microbe Interaction Research Team(APMT) Integrative Crop Biotechnology and Management Research Group(ACBG)National Center for Genetic Engineering and Biotechnology(BIOTEC)Pathum Thani 12120Thailand Key Laboratory for Plant Diversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina

A comprehensive account of fungal classification from freshwater habitats is outlined and discussed in the present review based on literature of biodiversity studies and recent morpho-phylogenetic analyses.A total of 3,870 freshwater fungal species are listed with additional details on the isolation source,habitat,geographical distribution,and molecular *** Ascomycota(2,968 species,1,018 genera)dominated the freshwater fungal taxa wherein Sordariomycetes(823 species,298 genera)had the largest number,followed by Dothideomycetes(677 species,229 genera),eurotiomycetes(276 species,49 genera),and Leotiomycetes(260 species,83 genera).Other phyla included in the updated classification of freshwater fungi are:Chytridiomycota(333 species,97 genera),Rozellomycota(221 species,105 genera),basidiomycota(218 species,100 genera),blastocladiomycota(47 species,10 genera),Monoblepharomycota(29 species,6 genera),Mucoromycota(19 spe-cies,10 genera),Aphelidiomycota(15 species,3 genera),entomophthoromycota(6 species,4 genera),Mortierellomycota(5 species,3 genera),Olpidiomycota(4 species,1 genus),Zoopagomycota(3 species,2 genera),and Sanchytriomycota(2 species,2 genera).The freshwater fungi belong to 1,361 genera,386 families and 145 *** Pleosporales and Laboulbeniaceae are the largest freshwater fungal order and family comprised of 391 and 185 species,*** most speciose genera are Chitonomyces(87,Laboulbeniomycetes),Verrucaria(50,eurotiomycetes),Rhizophydium(52,Rhizophydiomycetes),Penicillium(47,eurotiomycetes),and Candida(42,Saccharomycetes).

关键词： Fungal classification Fungal taxonomy Freshwater fungi Higher fungi Molecular taxonomy basal clades

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Towards unraveling relationships in Xylariomycetidae(Sordariomycetes)

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Fungal Diversity 2015年第4期73卷 73-144页

作者： Indunil C.Senanayake Sajeewa S.N.Maharachchikumbura Kevin D.Hyde Jayarama D.bhat e.b.gareth jones eric H.C.McKenzie Dong Qin Dai Dinushani A.Daranagama Monika C.Dayarathne Ishani D.Goonasekara Sirinapa Konta Wen Jing Li Qiu Ju Shang Marc Stadler Nalin N.Wijayawardene Yuan Pin Xiao Chada Norphanphoun Qirui Li Xing Zhong Liu Ali H.bahkali Ji Chuan Kang Yong Wang Ting Chi Wen Lucile Wendt Jian Chu Xu erio Camporesi Key Laboratory for Plant biodiversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina east and Central Asia World Agroforestry CentreKunming 650201YunnanChina Centre of excellence for Fungal Research Mae Fah Luang UniversityChiang RaiThailand Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesNo 31st West Beichen RoadChaoyang DistrictBeijing 100101China No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha 403108India Department of botany Goa UniversityGoa 403206India Department of botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Manaaki Whenua Landcare Research Private Bag 92170 AucklandNew Zealand engineering Research Center for Southwest bio-Pharmaceutical Resources Ministry of EducationGuizhou UniversityGuiyangGuizhou 550025China A.M.b.Gruppo Micologico Forlivese Antonio CicognaniVia Roma 18ForlìItaly A.M.b.Circolo Micologico Giovanni Carini314 BresciaItaly Societàper gli Studi Naturalistici della Romagna 144 BagnacavalloRAItaly Department of Microbial Drugs Helmholtz-Zentrum für Infektionsforschung GmbHInhoffenstrasse 738124 BraunschweigGermany Department of Microbial Drugs BraunschweigHelmholtz Centre for Infection Research(HZI)BraunschweigGermany

The classification of subclass Xylariomycetidae is revisited with additional collections and phylogeny based on novel rDNA sequence *** inferences are provided and are based on analysis of 115 sequence data,including new data for 27 *** updated outline to the subclass is presented based on the phylogenies and comprises two orders,18 families and 222 *** account of each order,family and genus in the subclass is *** accept the orders Amphisphaeriales and Xylariales based on morphological and phylogenetic *** comprises Amphisphaeriaceae,bartaliniaceae ***.,Clypeosphaeriaceae,Discosiaceae ***.,Pestalotiopsidaceae *** Phlogicylindriaceae *** comprises Apiosporaceae,Cainiaceae,Coniocessiaceae,Diatrypaceae,Graphostromataceae(doubtful),Hyponectriaceae,Iodosphaeriaceae,Lopadostomaceae ***.,Melogrammataceae,Pseudomassariaceae ***.,Vialaeaceae and *** new genera and species introduced are Arthrinium hyphopodii,***,Cainia anthoxanthis,Ciferriascosea ***.,***,***,Discosia neofraxinea,***,Hyalotiella rubi,Seimatosporium cornii,***,*** and Truncatella spartii.

关键词： Amphisphaeriales Apiosporaceae bartaliniaceae Cainiaceae Ciferriascosea Clypeosphaeriaceae Coniocessiaceae Discosiaceae Diatrypaceae Hyponectriaceae Hypoxyloideae Iodosphaeriaceae Lopadostomaceae Melogrammataceae Pestalotiopsidaceae Phlogicylindriaceae Pseudomassariaceae Vialaeaceae Xylariaceae Xylarioideae

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Families of Sordariomycetes

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Fungal Diversity 2016年第4期79卷 1-317页

作者： Sajeewa S.N.Maharachchikumbura Kevin D.Hyde e.b.gareth jones e.H.C.McKenzie Jayarama D.bhat Monika C.Dayarathne Shi-Ke Huang Chada Norphanphoun Indunil C.Senanayake Rekhani H.Perera Qiu-Ju Shang Yuanpin Xiao Melvina J.D’souza Sinang Hongsanan Ruvishika S.Jayawardena Dinushani A.Daranagama Sirinapa Konta Ishani D.Goonasekara Wen-Ying Zhuang Rajesh Jeewon Alan J.L.Phillips Mohamed A.Abdel-Wahab Abdullah M.Al-Sadi Ali H.bahkali Saranyaphat boonmee Nattawut boonyuen Ratchadawan Cheewangkoon Asha J.Dissanayake Jichuan Kang Qi-Rui Li Jian Kui Liu Xing Zhong Liu Zuo-Yi Liu JJennifer Luangsa-ard Ka-Lai Pang Rungtiwa Phookamsak Itthayakorn Promputtha Satinee Suetrong Marc Stadler Tingchi Wen Nalin N.Wijayawardene Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Center of excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniversityP.O.Box 34Al-Khod 123Oman Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha403108 GoaIndia Department of botany Goa UniversityGoa 403206India engineering Research Center of Southwest bio-Pharmaceutical Resources Ministry of EducationGuizhou UniversityGuiyang 550025Guizhou ProvinceChina Institute of Plant and environment Protection Beijing Academy of Agriculture and Forestry SciencesNo 9 of ShuGuangHuaYuanZhangLuHaidian District Beijing 100097China State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101China Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Faculty of Sciences Biosystems and Integrative Sciences Institute(BioISI)University of LisbonCampo Grande1749-016 LisbonPortugal Department of botany Faculty of ScienceSohag UniversitySohagEgypt Fungal biodiversity Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Department of Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand Department of Pharmacy Guiyang Medical UniversityGuiyangGuizhou 550025China Microbe Interaction Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Institute of Marine biology and Center of excell

Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate *** class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous *** occur in terrestrial,freshwater and marine habitats *** paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where *** paper brings together for the first time,since barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of *** of taxa is supported where possible by molecular *** outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 *** family Obryzaceae and Pleurotremataceae are excluded from the class.

关键词： Amplistromatales Annulatascales boliniales Calosphaeriales Chaetosphaeriales Coniochaetales Conioscyphales Cordanales Coronophorales Diaporthales Falcocladiales Glomerellales Hypocreales Jobellisiales Koralionastetales Lulworthiales Magnaporthales Melanosporales Meliolales Microascales Ophiostomatales Phylogeny Phyllachorales Pisorisporiales Pleurotheciales Sordariales Savoryellales Tirisporellales Togniniales Torpedosporales Trichosphaeriales Taxonomy Trichosphaeriales Type species Xylariales

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Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names

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Fungal Diversity 2014年第6期69卷 1-55页

作者： Nalin N.Wijayawardene Pedro W.Crous Paul M.Kirk David L.Hawksworth Saranyaphat boonmee Uwe braun Dong-Qin Dai Melvina J.D’souza Paul Diederich Asha Dissanayake Mingkhuan Doilom Singang Hongsanan e.b.gareth jones Johannes Z.Groenewald Ruvishika Jayawardena James D.Lawrey Jian-Kui Liu Robert Lücking Hugo Madrid Dimuthu S.Manamgoda Lucia Muggia Matthew P.Nelsen Rungtiwa Phookamsak Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Dhanushka N.Wanasinghe Saowanee Wikee Ying Zhang Andre Aptroot H.A.Ariyawansa Ali H.bahkali D.Jayarama bhat Cécile Gueidan Putarak Chomnunti G.Sybren De Hoog Kerry Knudsen Wen-Jing Li eric H.C.McKenzie Andrew N.Miller Alan J.L.Phillips Marcin Piatek Huzefa A.Raja Roger S.Shivas bernad Slippers Joanne e.Taylor Qing Tian Yong Wang Joyce H.C.Woudenberg Lei Cai Walter M.Jaklitsch Kevin D.Hyde Key Laboratory for Plant Diversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Institute of excellence in Fungal Research Chiang Rai 57100Thailand Forestry and Agricultural biotechnology Institute(FAbI) University of PretoriaPretoria 0002South Africa CbS-KNAW Fungal biodiversity Centre Uppsalalaan 83584 CT UtrechtThe Netherlands State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing100101People_s Republicof China Mycology Section Royal Botanic GardensKewRichmondSurrey TW93DSUK Department of Life Sciences The Natural History MuseumCromwell RoadLondon SW75BDUK Departamento de biología VegetalⅡ Facultad de FarmaciaUniversidad Complutense de MadridPlaza Ramón y CajalMadrid 28040Spain School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institut Für biologie Martin-Luther-UniversitatBereich Geobotanik Und Botanischer GartenHerbariumNeuwerk 2106099 Halle(Saale)Germany Musée National d'histoire Naturelle 25 Rue MunsterL-2160 LuxembourgLuxembourg Institute of Plant and environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Department of environmental Science and Policy George Mason University4400 University DriveFairfaxVA 22030-4444USA Science and education Integrative Research(Botany)The Field Museum1400 South Lake Shore DriveChicagoIL 60605-2496USA Institute of Plant Sciences University of GrazHolteigasse 68010GrazAustria Department of Life Science University of TriesteVia L.Giorgieri 10TriesteItaly Committee on evolutionary biology University of Chicago1025 E.57th StreetChicagoIL 60637USA Fungal biodiversity Laboratory(bFbD) National Center for Gen

Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July *** that date,each fungal species can have one nomenclaturally correct name in a particular *** other previously used names for this species will be considered as *** older generic epithet takes priority over the younger *** widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic *** the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future *** taxonomic placements of 1261 genera are listed as an *** names and suppressed names for 34 pleomorphic genera are listed *** and justifications are provided for possible proposed names after the list of *** are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.

关键词： Article 59.1 Ascomycota One name Phylogeny Pleomorphism

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The Faces of Fungi database:fungal names linked with morphology,phylogeny and human impacts

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Fungal Diversity 2015年第5期74卷 3-18页

作者： Subashini C.Jayasiri Kevin D.Hyde Hiran A.Ariyawansa Jayarama bhat bart buyck Lei Cai Yu-Cheng Dai Kamel A.Abd-elsalam Damien ertz Iman Hidayat Rajesh Jeewon e.b.gareth jones Ali H.bahkali Samantha C.Karunarathna Jian-Kui Liu J.Jennifer Luangsa-ard H.Thorsten Lumbsch Sajeewa S.N.Maharachchikumbura eric H.C.McKenzie Jean-Marc Moncalvo Masoomeh Ghobad-Nejhad Henrik Nilsson Ka-Lai Pang Olinto L.Pereira Alan J.L.Phillips Olivier Raspé Adam W.Rollins Andrea I.Romero Javier etayo Faruk Selçuk Steven L.Stephenson Satinee Suetrong Joanne e.Taylor Clement K.M.Tsui Alfredo Vizzini Mohamed A.Abdel-Wahab Ting-Chi Wen Saranyaphat boonmee Dong Qin Dai Dinushani A.Daranagama Asha J.Dissanayake Anusha H.ekanayaka S.C.Fryar Sinang Hongsanan Ruvishika S.Jayawardena Wen-Jing Li Rekhani H.Perera R.Phookamsak Nimali Ide Silva Kasun M.T.hambugala Qing Tian Nalin N.Wijayawardene Rui-Lin Zhao Qi Zhao Ji-Chuan Kang Itthayakorn Promputtha Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand World Agro forestry Centre east and Central Asia Office 132 Lanhei RoadKunming 650201China botany and Microbiology Department College of ScienceKing Saud UniversityRiyadh 1145Saudi Arabia Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha403108 GoaIndia Department of botany Goa UniversityGoa 403206India Muséum National d’Histoire Naturelle Département Systématique et EvolutionCP 39ISYEBUMR 7205 CNRS MNHN UPMC EPHE12 Rue BuffonF-75005 ParisFrance State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesWest Beicheng RdBeijingChina Institute of Microbiology Beijing Forestry UniversityPO Box 61Beijing 100083China Plant Pathology Research Institute Agricultural Research Center(ARC)12619 GizaEgypt botanic Garden Meise Department Bryophytes-Thallophytes(BT)Nieuwelaan 38B-1860 MeiseBelgium Fédération Wallonie-bruxelles Direction Générale de l’Enseignement non obligatoire et de la Recherche scientifiqueRue A.Lavallée 11080 BruxellesBelgium Microbiology Division Research Center for BiologyIndonesian Institute of Sciences(LIPI)Jl.Raya Jakarta-Bogor KM 46Cibinong 16911West JavaIndonesia Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Microbe Interaction Laboratory(bMIT) BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Science&education The Field Museum1400 S.Lake Shore DriveChicagoIL 60605USA Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Department of Natural History Royal Ontario Museumand Department of Ecology and Evolutionary BiologyUniversity of Toronto100 Queen’s ParkTorontoON M5S2C6Canada Department of biotechnology Iranian Research Organiza

Taxonomic names are key links between various databases that store information on different *** global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and Mycobank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCbI,ebI and UNITe *** the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium *** is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable *** tackle this problem,a new database(FacesofFungi),accessible at ***(FoF)has been *** fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification *** addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type *** database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are *** FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical *** data include the three main fungal groups(Ascomycota,basidiomycota,basal fungi)and fungus-like *** FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological *** webpage has 76 curators,and with the help of these s

关键词： Classification Database Faces of Fungi Fungi Phylogeny Taxonomy

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Families of Dothideomycetes

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Fungal Diversity 2013年第6期63卷 1-313页

作者： Kevin D.Hyde e.b.gareth jones Jian-Kui Liu Hiran Ariyawansa eric boehm Saranyaphat boonmee Uwe braun Putarak Chomnunti Pedro W.Crous Dong-Qin Dai Paul Diederich Asha Dissanayake Mingkhuan Doilom Francesco Doveri Singang Hongsanan Ruvishika Jayawardena James D.Lawrey Yan-Mei Li Yong-Xiang Liu Robert Lücking Jutamart Monkai Lucia Muggia Matthew P.Nelsen Ka-Lai Pang Rungtiwa Phookamsak Indunil C.Senanayake Carol A.Shearer Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Nalin N.Wijayawardene Saowanee Wikee Hai-Xia Wu Ying Zhang begoña Aguirre-Hudson S.Aisyah Alias AndréAptroot Ali H.bahkali Jose L.bezerra D.Jayarama bhat erio Camporesi ekachai Chukeatirote Cécile Gueidan David L.Hawksworth Kazuyuki Hirayama Sybren De Hoog Ji-Chuan Kang Kerry Knudsen Wen-Jing Li Xing-Hong Li Zou-Yi Liu Ausana Mapook eric H.C.McKenzie Andrew N.Miller Peter e.Mortimer Alan J.L.Phillips Huzefa A.Raja Christian Scheuer Felix Schumm Joanne e.Taylor Qing Tian Saowaluck Tibpromma Dhanushka N.Wanasinghe Yong Wang Jian-Chu Xu Supalak Yacharoen Ji-Ye Yan Min Zhang Key Laboratory for Plant biodiversity and biogeography of east Asia(KLPb) Kunming Institute of BotanyChinese Academy of ScienceKunming 650201Yunnan China World Agroforestry Centre East Asia NodeHeilongtanKunming 650201China Institute of excellence in Fungal Research Chiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute Ocean earth Sciences Kuala Lumpur 50603SelangorMalaysia Department of botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia 42 Longacre Drive LivingstonNJ 07039USA Institut für biologie Bereich Geobotanik und Botanischer GartenHerbariumMartin-Luther-UniversitätNeuwerk 2106099 Halle(Saale)Germany CbS-KNAW Fungal biodiversity Centre Uppsalalaan 83584CT UtrechtThe Netherlands Musée National d’histoire Naturelle 25 rue Munster2160 LuxembourgLuxembourg Institute of Plant and environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Via dei Funaioli 22 57126 LivornoItaly Department of environmental Science and Policy George Mason University4400 University DriveFairfaxVA 22030-4444USA International Fungal Research and Development Centre Key Laboratory of Resource Insect Cultivation&Utilization State Forestry AdministrationKunming 650224People’s Republic of China The Research Institute of Resource Insects Chinese Academy of ForestryKunming 650224People’s Republic of China Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China Science and education Integrative Research(Botany)The Field Museum1400 South Lake Shore DriveChicagoIL 60605-2496USA Institute of Plant Sciences University of GrazHolteigasse 68010 GrazAustria Department of Life Science University of TriesteVia L.Giorgieri 10TriesteItaly Committee on evolutionary biology University of Chicago1025 E.57th StreetChicagoIL 60637USA Institute ofMarine biology and Center of excellence for the Oceans Taiwan

Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate *** species are saprobes,with many asexual states comprising important plant *** are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous *** occur in terrestrial,freshwater and marine habitats in almost every part of the *** accept 105 families in Dothideomycetes with the new families Anteagloniaceae,bambusicolaceae,biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this *** family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also *** family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and *** paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to *** is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.

关键词： Acrospermales Asterinales botryosphaeriales Capnodiales Dothideales Dyfrolomycetales Hysteriales Jahnulales Lichenoconiales Lichenotheliales Microthyriales Monoblastiales Myriangiales Mytilinidiales Natipusillales Patellariales Phaeotrichales Phylogeny Pleosporales Strigulales Taxonomy Trypetheliales Tubeufiales Type species Venturiales

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Lipid nanoparticles deliver mRNA to the blood-brain barrier

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Nano Research 2024年第10期17卷 9126-9134页

作者： Yanina Kuzminich Avraham Shakked Randi Calkins Sebastian Rudden Camille jones Jessie Doan bora Jang elisa Schrader echeverri Ryan Zenhausern Liming Lian David Loughrey Hannah e.Peck Rachelle Wiese Dorothy Koveal Philip J.Santangelo James e.Dahlman George C.Woodruff School of Mechanical engineering Georgia Institute of TechnologyAtlantaGA 30332USA Parker H.Petit Institute for bioengineering and biosciences Georgia Institute of TechnologyAtlantaGA 30332USA Wallace H.Coulter Department of biomedical engineering Emory University School of Medicine and Georgia Institute of TechnologyAtlantaGA 30332USA

Lipid nanoparticles(LNPs)have delivered RNA to hepatocytes in patients after intravenous *** clinical data support efforts to design LNPs that transfect cells in the central nervous system(CNS).However,delivery to the CNS has been difficult,in large part because quantifying on-target delivery alongside common off-target cell types in adult mice remains *** we report methods to isolate different cell types from the CNS,and subsequently present mRNA delivery readouts using a liver-detargeted *** data suggest that LNPs without targeting ligands can transfect cerebral endothelial cells in mice after intravenous *** the difficulty of crossing the blood-brain barrier,they also underscore the value of quantifying delivery in the CNS with cell-type resolution instead of whole-tissue resolution.

关键词： lipid nanoparticle mRNA nanomedicine central nervous system blood-brain barrier

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Fungal diversity notes 1–110:taxonomic and phylogenetic contributions to fungal species

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Fungal Diversity 2015年第3期72卷 1-197页

作者： Jian Kui Liu Kevin D.Hyde e.b.gareth jones Hiran A.Ariyawansa Darbhe J.bhat Saranyaphat boonmee Sajeewa S.N.Maharachchikumbura eric H.C.McKenzie Rungtiwa Phookamsak Chayanard Phukhamsakda belle Damodara Shenoy Mohamed A,Abdel-Wahab bart buyck Jie Chen K.W.Thilini Chethana Chonticha Singtripop Dong Qin Dai Yu Cheng Dai Dinushani ADaranagama Asha J.Dissanayake Mingkwan Doilom Melvina J.D’souza Xin Lei Fan Ishani DGoonasekara Kazuyuki Hirayama Sinang Hongsanan Subashini C.Jayasiri Ruvishika S.Jayawardena Samantha C.Karunarathna Wen Jing Li Ausana Mapook Chada Norphanphoun Ka Lai Pang Rekhani H.Perera Derek Peršoh Umpava Pinruan Indunil CSenanayake Sayanh Somrithipol Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Qing Tian Saowaluck Tibpromma Danushka Udayanga Nalin N.Wijayawardene Dhanuska Wanasinghe Komsit Wisitrassameewong Xiang Yu Zeng Faten AAbdel-Aziz Slavomir Adamčík Ali H.bahkali Nattawut boonyuen Timur bulgakov Philippe Callac Putarak Chomnunti Katrin Greiner Akira Hashimoto Valerie Hofstetter Ji Chuan Kang David Lewis Xing Hong Li Xing Zhong Liu Zuo Yi Liu Misato Matsumura Peter e.Mortimer Gerhard Rambold emile Randrianjohany Genki Sato Veera Sri-Indrasutdhi Cheng Ming Tian Annemieke Verbeken Wolfgang von brackel Yong Wang Ting Chi Wen Jian Chu Xu Ji Ye Yan Rui Lin Zhao erio Camporesi Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Key Laboratory for Plant Diversity and biogeography of east Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina Institute of excellence in Fungal Research and School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Formerly Department of botany Goa UniversityGoaIndia No.128/1–J Azad Housing SocietyCurcaGoa VelhaIndia Muséum national d’histoire naturelle Dépt.Systématique etévolutionUMR 720575005 ParisFrance Institute of Microbiology&beijing Key Laboratory for Forest Pest Control Beijing Forestry UniversityPO Box 61Beijing 100083China Institute of Plant and environment Protection Beijing Academy of Agriculture and Forestry SciencesNo.9 of Shu Guang Hua Yuan Zhong LuHaidian DistrictBeijing 10097China The Key Laboratory for Silviculture and Conservation of Ministry of education Beijing Forestry UniversityBeijing 100083China Mycology University of BayreuthUniversitätsstraße 3095440 BayreuthGermany The United Graduate School of Agricultural Sciences Iwate University18-8 Ueda 3 chomeMorioka 020-8550Japan Apple experiment Station Aomori Prefectural Agriculture and Forestry Research Center24 FukutamiBotandairaKuroishiAomori 036-0332Japan Department of Plant Protection Agroscope Changins-Wadenswil Research Station ACWRte de Duiller1260 NyonSwitzerland Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Department of botany Faculty of ScienceSohag UniversitySohagEgypt Institute of botany Slovak Academy of SciencesDúbravskácesta 984523 BratislavaSlovakia Hirosaki University Bleakwood262 CR 3062NewtonTexas 75966USA Faculty of Agriculture and Life Sciences Hirosaki University3 Bunkyo-choHirosakiAomori

This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic *** new family,Paradictyoarthriniaceae is introduced based on its distinct lineage in Dothideomycetes and its unique *** family is sister to biatriosporaceae and *** new genera are Allophaeosphaeria(Phaeosphaeriaceae),Amphibambusa(Amphisphaeriaceae),brunneomycosphaerella(Capnodiales genera incertae cedis),Chaetocapnodium(Capnodiaceae),Flammeascoma(Anteagloniaceae),Multiseptospora(Pleosporales genera incertae cedis),Neogaeumannomyces(Magnaporthaceae),Palmiascoma(bambusicolaceae),Paralecia(Squamarinaceae)and Sarimanas(Melanommataceae).The newly described species are the Ascomycota Aliquandostipite manochii,Allophaeosphaeria dactylidis,***,Alternaria cesenica,Amphibambusa bambusicola,Amphisphaeria sorbi,Annulohypoxylon thailandicum,Atrotorquata spartii,brunneomycosphaerella laburni,byssosphaeria musae,Camarosporium aborescentis,***,***,Chaetocapnodium siamensis,Chaetothyrium agathis,Colletotrichum sedi,Conicomyces pseudotransvaalensis,Cytospora berberidis,***,Diaporthe thunbergiicola,Diatrype palmicola,Dictyosporium aquaticum,***,***,Didymella cirsii,Dinemasporium nelloi,Flammeascoma bambusae,Kalmusia italica,***,Keissleriella sparticola,Lauriomyces synnematicus,Leptosphaeria ebuli,Lophiostoma pseudodictyosporium,***,Lophiotrema eburnoides,Montagnula graminicola,Multiseptospora thailandica,Myrothecium macrosporum,Natantispora unipolaris,Neogaeumannomyces bambusicola,Neosetophoma clematidis,***,Oxydothis atypica,Palmiascoma gregariascomum,Paraconiothyrium nelloi,***,Paradictyoarthrinium tectonicola,Paralecia pratorum,Paraphaeosphaeria spartii,Pestalotiopsis digitalis,***,***,Phaeoisaria pseudoclematidis,Phragmocapnias philippinensis,Pseudocamarosporium cotinae,Pseudocercospora tam

关键词： Ascomycota basidiomycota Global Taxonomy Initiative Phylogeny Taxonomy

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