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Phylogenetic relationships of five genera of Xylariales and Rosasphaeria ***.(Hypocreales)

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Fungal Diversity 2012年第1期52卷 75-98页

作者： walter m.jaklitsch Hermann Voglmayr Department of Systematic and Evolutionary Botany Faculty Centre of BiodiversityUniversity of ViennaRennweg 141030 WienAustria

Eight inconspicuous non-stromatic perithecial fungi immersed in plant tissue are assessed with respect to their morphology,ecology and phylogenetic *** is laid on two genera now and then placed in the family Hyponectriaceae,Xylariales:Leiosphaerella with its type species *** occurring on Vaccinium,and Pseudomassaria with its type species *** occurring on *** molecular phylogenetic analyses of LSU and ITS sequences,the generic types of these genera are closely related,but their familial affiliation within Xylariales remains *** sepincoliformis clusters with ***,whereas *** is not congeneric with Pseudomassaria and *** is combined in Leiosphaerella despite its *** species thought to belong to Leiosphaerella are re-assessed:*** that occurs on Rosa,is disposed in the new genus Rosasphaeria,which is close to Eucasphaeria in the Niessliaceae(Hypocreales),according to multi-gene phylogenetic analyses(ITS,LSU,rpb2 and tef1).For *** the genus Pseudomassariella is revived.A Leiosphaerellalike fungus on Lycopodium is described as the new species monographella *** addition the phylogenetic relationships of two fungi forming superficial stromata are here clarified:Collodiscula japonica belongs to the Xylariaceae,while melogramma campylosporum may currently be interpreted as representing a family of its own,the melogrammataceae.

关键词： Collodiscula Eucasphaeria.Leiosphaerella massarina melogramma metasphaeria New genus Phylogenetic reconstruction Pseudomassaria Pseudomassariella Systematics

Asterodiscus and Stigmatodiscus,two new apothecial dothideomycete genera and the new order Stigmatodiscales

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Fungal Diversity 2016年第5期80卷 271-284页

作者： Hermann Voglmayr Alain Gardiennet walter m.jaklitsch Division of Systematic and Evolutionary Botany Department of Botany and Biodiversity ResearchUniversity of ViennaRennweg 14A-1030 ViennaAustria 14 rue Roulette F-21260 VéronnesFrance Institute of Forest Entomology Forest Pathology and Forest ProtectionDepartment of Forest and Soil SciencesBOKU-University of Natural Resources and Life SciencesHasenauerstraße 38A-1190 ViennaAustria

During a survey on corticolous Dothideomycetes,several collections with ascospores matching the genera Asteromassaria and Stigmatomassaria(Pleomassariaceae,Pleosporales)were revealed from dead corticated twigs of Acer,Carpinus and *** morphological examination showed that their ascomata were apothecial,with a hamathecium consisting of septate,branched paraphyses,which are apically swollen at *** collections were cultured and sequenced,and a Blast search of their nuc 28S rDNA sequences revealed dothideomycetous affiliation,but without a close match to a specific family or *** analyses of a multigene matrix containing a representative selection of Dothideomycetes from four genes(nuc 18S rDNA,nuc 28S rDNA,rpb2 and tef1)revealed placement within Dothideomycetes but without a supported familial or ordinal *** on the phylogenetic analyses and morphological investigations,the new genera Asterodiscus and Stigmatodiscus,with the two new species *** and ***,are described and illustrated,and placed in the new family Stigmatodiscaceae and new order Stigmatodiscales.

关键词： Ascomycota Dothideomycetes New species Newgenus Newfamily Neworder Phylogenetic analysis Taxonomy

multigene phylogeny and taxonomy of the genus melanconiella(Diaporthales)

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Fungal Diversity 2012年第6期57卷 1-44页

作者： Hermann Voglmayr Amy Y.Rossman Lisa A.Castlebury walter m.jaklitsch Department of Systematic and Evolutionary Botany Faculty Centre of BiodiversityUniversity of ViennaRennweg 141030WienAustria Systematic mycology&microbiology Laboratory USDAAgricultural Research ServiceB010A10300 Baltimore AveBeltsvilleMD 20705USA

molecular phylogenetic analyses of LSU rDNA demonstrate monophyly of the genus melanconiella,and its status as a genus distinct from melanconis is *** of macro-and microscopic morphology,pure cultures and phylogenetic analyses of partial SSU-ITS-LSU rDNA,tef1 and rpb2 sequences revealed 13 distinct species of melanconiella,six of which are described as new(***,***,***,***,***,***).melanconiella hyperopta *** is described as a new *** carpinicola,***,***,*** and *** are formally combined into *** name melanconiella chrysostroma is excluded from melanconiella,as it is an obligate synonym of wuestneia *** type of melanconiella is confirmed as *** species are lecto-and/or epitypified.A key to all treated species ofmelanconiella is provided,and the circumscriptions of the genera melanconis and melanconiella are *** melanconiella species revealed by molecular phylogenetic analyses can be well characterised by a suite of morphological traits including ascospore shape,length and width,colour,absence/presence and shape of appendages and the ***-teleomorph connections were confirmed by pure culture and DNA data,revealing the presence of a single melanconium-or discosporina-like anamorph for each *** growth was found to be characteristic of the respective *** is shown to be confined to the host family Betulaceae,and all species are found to be highly host-specific,mostly confined to a single host *** biodiversity ofmelanconiella was determined to be centred on the genus Carpinus with nine species,five of which have been confirmed on *** appears to be the geographic centre of melanconiella biodiversity.

关键词： High diversity Host specificity melanconidaceae molecular phylogeny New species Pathogen Systematics

The Longibrachiatum Clade of Trichoderma:a revision with new species

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Fungal Diversity 2012年第4期55卷 77-108页

作者： Gary J.Samuels Adnan Ismaiel Temesgen B.mulaw George Szakacs Irina S.Druzhinina Christian P.Kubicek walter m.jaklitsch United States Department of Agriculture Agricultural Research ServiceSystematic Mycology&Microbiology LaboratoryB-010a10300 Baltimore AveBeltsvilleMD 20705USA Center for Environmental Science Institute of Marine and Environmental TechnologyUniversity of MarylandBaltimoreMD 21201USA Department of Applied Biotechnology and Food Science Budapest University of Technology and Economics(BUTE)1111 BudapestGellért ter 4Hungary Vienna University of Technology Institute of Chemical EngineeringGetreidemarkt 9/1661060 WienAustria Department of Systematic and Evolutionary Botany Faculty Centre of BiodiversityUniversity of ViennaRennweg 141030 ViennaAustria

The Longibrachiatum Clade of Trichoderma is *** new species are described(***,***,***,***,***,***,***,***).The twenty-one species known to belong to the Longibrachiatum Clade are included in a synoptic *** parareesei and *** are redescribed based on new collections or additional *** teleomorphs are reported for *** and *** described species are annotated.

关键词： Hypocrea Hypocreaceae Hypocreales Endophyte medical mycology Revision Systematics Taxonomy Soil fungi Biogeography

Front line defenders of the ecological niche!Screening the structural diversity of peptaibiotics from saprotrophic and fungicolous Trichoderma/Hypocrea species

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Fungal Diversity 2014年第6期69卷 117-146页

作者： Christian R.Rohrich walter m.jaklitsch Hermann Voglmayr Anita Iversen Andreas Vilcinskas Kristian Fog Nielsen Ulf Thrane Hans von Dohren Hans Bruckner Thomas Degenkolb Bioresources Project Group Fraunhofer Institute for Molecular Biology and Applied Ecology(IME)Winchesterstrasse 235394 GiessenGermany Department of Systematic and Evolutionary Botany Faculty Centre of BiodiversityUniversity of ViennaRennweg 141030 ViennaAustria Department of Systems Biology Technical University of DenmarkSoltofts PladsBuilding 2212800 Kgs.LyngbyDenmark Interdisciplinary Research Centre for BioSystems Land Use and Nutrition(IFZ)Department of Applied EntomologyInstitute of Phytopathology and Applied Zoology(IPAZ)University of GiessenHeinrich-Buff-Ring 26-3235392 GiessenGermany Biochemistry and molecular Biology OE 2 Institute of ChemistryTechnical University of BerlinFranklinstrasse 2910587 BerlinGermany Interdisciplinary Research Centre for BioSystems Land Use and Nutrition(IFZ)Department of Food SciencesInstitute ofNutritional ScienceUniversity of GiessenHeinrich-Buff-Ring 26-3235392 GiessenGermany AB SCIEXGermany GmbH Landwehrstrasse 5464293 DarmstadtGermany Danish Emergency management Agency Universitetsparken 22100 CopenhagenDenmark

Approximately 950 individual sequences of nonribosomally biosynthesised peptides are produced by the genus Trichoderma/Hypocreathat belong to a perpetually growing class of mostly linear antibiotic oligopeptides,which are rich in the non-proteinogenic α-aminoisobutyric acid(Aib).Thus,they are comprehensively named ***,peptaibiotics represent ca.80% of the total inventory of secondarymetabolites currently known from Trichoderma/*** unique membrane-modifying bioactivity results from amphipathicity and helicity,thus making them ideal candidates in assisting both colonisation and defence of the natural habitats by their fungal *** this,reports on the in vivo-detection of peptaibiotics have scarcely been published in the *** order to evaluate the significance of peptaibiotic production for a broader range of potential producers,we screened nine specimens belonging to seven hitherto uninvestigated fungicolous or saprotrophic Trichoderma/Hypocrea species by liquid chromatography coupled to electrospray high resolution mass *** of peptaibiotics found were independently confirmed by analysing the peptaibiome of pure agar cultures obtained by single-ascospore isolation from the *** the nine species examined,five were screened positive for peptaibiotics.A total of 78 peptaibiotics were sequenced,56(=72%)of which are ***,dihydroxyphenylalaninol and O-prenylated tyrosinol,two C-terminal residues,which have not been reported for peptaibiotics before,were found as well as new and recurrent sequences carrying the recently described tyrosinol residue at their *** majority of peptaibiotics sequenced are 18-or 19-residue *** homologies with‘classical representatives’of subfamily 1(SF1)-peptaibiotics argue for the formation of transmembrane ion channels,which are prone to facilitate the producer capture and defence of its substratum.

关键词： HPLC/QTOF-ESI-HRmS metabolite profiling Peptaibiotics Peptaibols Aib peptides Trichoderma Hypocrea

Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names

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Fungal Diversity 2014年第6期69卷 1-55页

作者： Nalin N.wijayawardene Pedro w.Crous Paul m.Kirk David L.Hawksworth Saranyaphat Boonmee Uwe Braun Dong-Qin Dai melvina J.D’souza Paul Diederich Asha Dissanayake mingkhuan Doilom Singang Hongsanan E.B.Gareth Jones Johannes Z.Groenewald Ruvishika Jayawardena James D.Lawrey Jian-Kui Liu Robert Lücking Hugo madrid Dimuthu S.manamgoda Lucia muggia matthew P.Nelsen Rungtiwa Phookamsak Satinee Suetrong Kazuaki Tanaka Kasun m.Thambugala Dhanushka N.wanasinghe Saowanee wikee Ying Zhang Andre Aptroot H.A.Ariyawansa Ali H.Bahkali D.Jayarama Bhat Cécile Gueidan Putarak Chomnunti G.Sybren De Hoog Kerry Knudsen wen-Jing Li Eric H.C.mcKenzie Andrew N.miller Alan J.L.Phillips marcin Piatek Huzefa A.Raja Roger S.Shivas Bernad Slippers Joanne E.Taylor Qing Tian Yong wang Joyce H.C.woudenberg Lei Cai walter m.jaklitsch Kevin D.Hyde Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China world Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Institute of Excellence in Fungal Research Chiang Rai 57100Thailand Forestry and Agricultural Biotechnology Institute(FABI) University of PretoriaPretoria 0002South Africa CBS-KNAw Fungal Biodiversity Centre Uppsalalaan 83584 CT UtrechtThe Netherlands State Key Laboratory of mycology Institute of MicrobiologyChinese Academy of SciencesBeijing100101People_s Republicof China mycology Section Royal Botanic GardensKewRichmondSurrey TW93DSUK Department of Life Sciences The Natural History MuseumCromwell RoadLondon SW75BDUK Departamento de Biología VegetalⅡ Facultad de FarmaciaUniversidad Complutense de MadridPlaza Ramón y CajalMadrid 28040Spain School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institut Für Biologie Martin-Luther-UniversitatBereich Geobotanik Und Botanischer GartenHerbariumNeuwerk 2106099 Halle(Saale)Germany musée National d'histoire Naturelle 25 Rue MunsterL-2160 LuxembourgLuxembourg Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Department of Botany and microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Department of Environmental Science and Policy George Mason University4400 University DriveFairfaxVA 22030-4444USA Science and Education Integrative Research(Botany)The Field Museum1400 South Lake Shore DriveChicagoIL 60605-2496USA Institute of Plant Sciences University of GrazHolteigasse 68010GrazAustria Department of Life Science University of TriesteVia L.Giorgieri 10TriesteItaly Committee on Evolutionary Biology University of Chicago1025 E.57th StreetChicagoIL 60637USA Fungal Biodiversity Laboratory(BFBD) National Center for Gen

Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July *** that date,each fungal species can have one nomenclaturally correct name in a particular *** other previously used names for this species will be considered as *** older generic epithet takes priority over the younger *** widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic *** the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future *** taxonomic placements of 1261 genera are listed as an *** names and suppressed names for 34 pleomorphic genera are listed *** and justifications are provided for possible proposed names after the list of *** are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.

关键词： Article 59.1 Ascomycota One name Phylogeny Pleomorphism

Fungal diversity notes 1–110:taxonomic and phylogenetic contributions to fungal species

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Fungal Diversity 2015年第3期72卷 1-197页

作者： Jian Kui Liu Kevin D.Hyde E.B.Gareth Jones Hiran A.Ariyawansa Darbhe J.Bhat Saranyaphat Boonmee Sajeewa S.N.maharachchikumbura Eric H.C.mcKenzie Rungtiwa Phookamsak Chayanard Phukhamsakda Belle Damodara Shenoy mohamed A,Abdel-wahab Bart Buyck Jie Chen K.w.Thilini Chethana Chonticha Singtripop Dong Qin Dai Yu Cheng Dai Dinushani ADaranagama Asha J.Dissanayake mingkwan Doilom melvina J.D’souza Xin Lei Fan Ishani DGoonasekara Kazuyuki Hirayama Sinang Hongsanan Subashini C.Jayasiri Ruvishika S.Jayawardena Samantha C.Karunarathna wen Jing Li Ausana mapook Chada Norphanphoun Ka Lai Pang Rekhani H.Perera Derek Peršoh Umpava Pinruan Indunil CSenanayake Sayanh Somrithipol Satinee Suetrong Kazuaki Tanaka Kasun m.Thambugala Qing Tian Saowaluck Tibpromma Danushka Udayanga Nalin N.wijayawardene Dhanuska wanasinghe Komsit wisitrassameewong Xiang Yu Zeng Faten AAbdel-Aziz Slavomir Adamčík Ali H.Bahkali Nattawut Boonyuen Timur Bulgakov Philippe Callac Putarak Chomnunti Katrin Greiner Akira Hashimoto Valerie Hofstetter Ji Chuan Kang David Lewis Xing Hong Li Xing Zhong Liu Zuo Yi Liu misato matsumura Peter E.mortimer Gerhard Rambold Emile Randrianjohany Genki Sato Veera Sri-Indrasutdhi Cheng ming Tian Annemieke Verbeken wolfgang von Brackel Yong wang Ting Chi wen Jian Chu Xu Ji Ye Yan Rui Lin Zhao Erio Camporesi Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina Institute of Excellence in Fungal Research and School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Botany and microbiology King Saudi UniversityRiyadhSaudi Arabia manaaki whenua Landcare Research Private Bag 92170AucklandNew Zealand Formerly Department of Botany Goa UniversityGoaIndia No.128/1–J Azad Housing SocietyCurcaGoa VelhaIndia muséum national d’histoire naturelle Dépt.Systématique etévolutionUMR 720575005 ParisFrance Institute of microbiology&Beijing Key Laboratory for Forest Pest Control Beijing Forestry UniversityPO Box 61Beijing 100083China Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo.9 of Shu Guang Hua Yuan Zhong LuHaidian DistrictBeijing 10097China The Key Laboratory for Silviculture and Conservation of ministry of Education Beijing Forestry UniversityBeijing 100083China mycology University of BayreuthUniversitätsstraße 3095440 BayreuthGermany The United Graduate School of Agricultural Sciences Iwate University18-8 Ueda 3 chomeMorioka 020-8550Japan Apple Experiment Station Aomori Prefectural Agriculture and Forestry Research Center24 FukutamiBotandairaKuroishiAomori 036-0332Japan Department of Plant Protection Agroscope Changins-Wadenswil Research Station ACWRte de Duiller1260 NyonSwitzerland Department of Botany and microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Department of Botany Faculty of ScienceSohag UniversitySohagEgypt Institute of Botany Slovak Academy of SciencesDúbravskácesta 984523 BratislavaSlovakia Hirosaki University Bleakwood262 CR 3062NewtonTexas 75966USA Faculty of Agriculture and Life Sciences Hirosaki University3 Bunkyo-choHirosakiAomori

This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic *** new family,Paradictyoarthriniaceae is introduced based on its distinct lineage in Dothideomycetes and its unique *** family is sister to Biatriosporaceae and *** new genera are Allophaeosphaeria(Phaeosphaeriaceae),Amphibambusa(Amphisphaeriaceae),Brunneomycosphaerella(Capnodiales genera incertae cedis),Chaetocapnodium(Capnodiaceae),Flammeascoma(Anteagloniaceae),multiseptospora(Pleosporales genera incertae cedis),Neogaeumannomyces(magnaporthaceae),Palmiascoma(Bambusicolaceae),Paralecia(Squamarinaceae)and Sarimanas(melanommataceae).The newly described species are the Ascomycota Aliquandostipite manochii,Allophaeosphaeria dactylidis,***,Alternaria cesenica,Amphibambusa bambusicola,Amphisphaeria sorbi,Annulohypoxylon thailandicum,Atrotorquata spartii,Brunneomycosphaerella laburni,Byssosphaeria musae,Camarosporium aborescentis,***,***,Chaetocapnodium siamensis,Chaetothyrium agathis,Colletotrichum sedi,Conicomyces pseudotransvaalensis,Cytospora berberidis,***,Diaporthe thunbergiicola,Diatrype palmicola,Dictyosporium aquaticum,***,***,Didymella cirsii,Dinemasporium nelloi,Flammeascoma bambusae,Kalmusia italica,***,Keissleriella sparticola,Lauriomyces synnematicus,Leptosphaeria ebuli,Lophiostoma pseudodictyosporium,***,Lophiotrema eburnoides,montagnula graminicola,multiseptospora thailandica,myrothecium macrosporum,Natantispora unipolaris,Neogaeumannomyces bambusicola,Neosetophoma clematidis,***,Oxydothis atypica,Palmiascoma gregariascomum,Paraconiothyrium nelloi,***,Paradictyoarthrinium tectonicola,Paralecia pratorum,Paraphaeosphaeria spartii,Pestalotiopsis digitalis,***,***,Phaeoisaria pseudoclematidis,Phragmocapnias philippinensis,Pseudocamarosporium cotinae,Pseudocercospora tam

关键词： Ascomycota Basidiomycota Global Taxonomy Initiative Phylogeny Taxonomy