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Journal of Integrative Plant Biology 2006年第9期48卷 1108-1114页

作者： so-young park Wi-young Lee youngki park Jin-Kwon Ahn Biotechnology Division Korea Forest Research Institute Suwon 441-350 Korea

Changes in cellular isoflavone （daidzein and genistein） contents were monitored in root cultures of Albizzia kalkora （Roxb.） Prain after feeding different ratios of NH4^＋/NO3^- and treatment with a biotic elicitor （three strains of Rhizobium sp.）. The NH4^＋/NO3^- ratio appears to be positively correlated with daidzein content in the roots and shows a negative correlation with genistein. Among the three different strains of Rhizobium used, the strain ATCC 15834 caused a 35% increase in daidzein production by infection. In the case of genistein, maximum production （94%） was obtained when cultures were treated on Day 6 by the strains ATCC 15834 and KCTC 1541. The biosynthetic pathway of the two isoflavones apparently reacts differently to the same culture conditions and the same strains of Rhizobium. Therefore, the present data suggest that the production of daidzein and genistein could be modulated by changing the NH4^＋/NO3^- ratio and the application of Rhizobium.

关键词： Albizzia kalkora infection isoflavone nitrogen root culture

Reciprocal inhibition of expression between RAV1 and BES1 modulates plant growth and development in Arabidopsis

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Journal of Integrative Plant Biology 2023年第5期65卷 1226-1240页

作者： Dami Yang Hyun-young Shin Hyun Kyung Kang Yun Shang so young park Dong-Hoon Jeong Kyoung Hee Nam Department of Biological Sciences Sookmyung Women's UniversitySeoul 04310Republic of Korea Research Institute for Women's HealthSookmyung Women's UniversitySeoul 04310Republic of Korea Department of Life Science and Multidisciplinary Genome Institute Hallym UniversityChuncheon 24252Republic of Korea Present Address:Peking University Institute of Advanced Agricultural ScienceWeifang 261325China

RAV1(Related to ABI3/VP1)is a plant-specific B3 and AP2 domain-containing transcription factor that acts as a negative regulator of growth in many plant *** expression of RAV1 is downregulated by brassinosteroids(BRs);large-scale transcriptome analyses have shown that the expression of RAV1 was previously targeted by BRI1-EMS-SUPPREsoR1(BES1)and BRASSINAZOLE-RESISTANT1(BZR1),which are critical transcription factors for the BR-signaling *** RAV1-overexpressing transgenic plants,we showed that RAV1 overexpression reduced the BR signaling capacity,resulting in the downregulation of BR biosynthetic genes and BES1 ***,we demonstrated that BES1,not BZR1,is directly bound to the RAV1 promoter and repressed RAV1 expression,and vice versa;RAV1 is also bound to the BES1 promoter and repressed BES1 *** mutual inhibition was specific to RAV1 and BES1 because RAV1 exhibited binding activity to the BZR1 promoter but did not repress BZR1 *** observed that constitutively activated BR signaling phenotypes in bes1-D were attenuated by the repression of endogenous BES1 expression in transgenic bes1-D plants overexpressing ***-sequencing analysis of RAV1-overexpressing transgenic plants and bes1-D mutant plants revealed differentially expressed genes by RAV1 and BES1 and genes that were oppositely co-regulated by RAV1 and ***1 and BES1 regulated different transcriptomes but co-regulated a specific set of genes responsible for the balance between growth and *** results suggested that the mutual inhibitory transcriptional activities of RAV1 and BES1 provide fine regulatory mechanisms for plant growth and development.

关键词： BES1 growth modulation RAV1 transcriptional regulation

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Ubiquitin regulatory X(UBX)domain-containing protein 6 is essential for autophagy induction and inflammation control in macrophages

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Cellular & Molecular Immunology 2024年第12期21卷 1441-1458页

作者： young Jae Kim Sung-Gwon Lee so young park Sang Min Jeon soo In Kim Kyung Tae Kim Taylor Roh Sang-Hee Lee Min Joung Lee Jinyoung Lee Hyeon Ji Kim so Eui Lee Jin Kyung Kim Jun young Heo In soo Kim Chungoo park Seungwha Paik Eun-Kyeong Jo Department of Microbiology Chungnam National University College of MedicineDaejeon 35015Republic of Korea Department of Medical Science Chungnam National University College of MedicineDaejeon 35015Republic of Korea Section of Genetics and Physiology Laboratory of Molecular and Cellular BiologyNational Institute of Diabetes and Digestive and Kidney Diseases(NIDDK)National Institutes of Health(NIH)BethesdaMD 20892USA School of Biological Sciences and Technology Chonnam National UniversityGwangju 61186Republic of Korea Division of Pulmonary Allergy and Critical Care MedicineKangdong Sacred Heart HospitalHallym Medical CenterSeoul 05355Republic of Korea System Network Inflammation Control Research Center Chungnam National University College of MedicineDaejeon 35015Republic of Korea Center for Research Equipment Korea Basic Science InstituteCheongjuChungbuk 28199Republic of Korea Department of Biochemistry Chungnam National University College of MedicineDaejeon 35015Republic of Korea Department of Microbiology Keimyung University School of MedicineDaegu 42601Republic of Korea Department of Pharmacology Chungnam National University College of MedicineDaejeon 35015Republic of Korea

Ubiquitin regulatory X(UBX)domain-containing protein 6(UBXN6)is an essential cofactor for the activity of the valosin-containing protein p97,an adenosine triphosphatase associated with diverse cellular ***,its role in cells of the innate immune system remains largely *** this study,we report that UBXN6 is upregulated in humans with sepsis and may serve as a pivotal regulator of inflammatory responses via the activation of ***,the upregulation of UBXN6 in sepsis patients was negatively correlated with inflammatory gene profiles but positively correlated with the expression of Forkhead box O3,an autophagy-driving transcription *** with those of control mice,the macrophages of mice subjected to myeloid cell-specific UBXN6 depletion exhibited exacerbated inflammation,increased mitochondrial oxidative stress,and greater impairment of autophagy and endoplasmic reticulum-associated degradation ***6-deficient macrophages also exhibited immunometabolic remodeling,characterized by a shift to aerobic glycolysis and elevated levels of branched-chain amino *** metabolic shifts amplify mammalian target of rapamycin pathway signaling,in turn reducing the nuclear translocation of the transcription factor EB and impairing lysosomal ***,these data reveal that UBXN6 serves as an activator of autophagy and regulates inflammation to maintain immune system suppression during human sepsis.

关键词： UBXN6 Sepsis Inflammation Autophagy Immunosuppressi

Lentinula edodes extract inhibits matrix metalloproteinase expression and increases typeⅠprocollagen expression via the p38 MAPK/c-Fos signaling pathway in ultraviolet A and B-irradiated HaCaT keratinocytes

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Asian Pacific Journal of Tropical Biomedicine 2021年第4期11卷 164-173页

作者： Jung Im Lee Jung Hwan Oh Fatih Karadeniz so young park Hye Ran Kim Hyun Jin Jo Kyung Im Jung Byung-Jin Jeon Chang-Suk Kong Marine Biotechnology Center for Pharmaceuticals and Foods Silla UniversityBusan 46958Korea Department of Food and Nutrition College of Medical and Life SciencesSilla UniversityBusan 46958Korea Ocean Fisheries and Bio Center Busan technoparkBusan 46048Korea

Objective:To determine the effect of Lentinula edodes extract on ultraviolet(UV)A and UVB-induced changes in matrix metalloproteinase(MMP)and type I procollagen expression using human immortalized HaCaT ***:Lentinula edodes ethanol extract(LEE)was obtained by extraction with 80%ethanol for 4 h at 80℃.Effect of LEE on UVinduced alteration on the expression and production of MMPs and type I procollagen in keratinocytes was investigated using ELISA,RT-PCR,and Western blotting *** determine the underlying mechanism of LEE-mediated effects,mitogen-activated protein kinase(MAPK)and activator protein 1 signaling pathways were analysed by Western blotting ***:LEE significantly inhibited the expression of MMP-1 and MMP-9 and increased the expression of type I procollagen in UVA and UVB-irradiated HaCaT *** phosphorylation levels of p38 were significantly inhibited by LEE whereas it did not affect c-Jun N-terminal kinase and extracellular signal-regulated kinase *** of p38 phosphorylation was also accompanied by downregulation of UVA and UVB-induced increase in ***:LEE effectively inhibits the expression of MMP-1 and MMP-9 and increases type I procollagen production through the p38 MAPK/c-Fos signaling pathway in UVA and UVB-irradiated HaCaT *** findings suggest that Lentinula edodes may be developed as a cosmetic material to suppress UV exposuremediated skin aging.

关键词： Lentinula edodes Ultraviolet Matrix metalloproteinases TypeⅠprocollagen Ha Ca T

Effect of preprocessing on performances of machine learning-based mineral composition analysis on gas hydrate sediments, Ulleung Basin, East Sea

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Petroleum Science 2025年第1期22卷 151-162页

作者： Hongkeun Jin Ju young park Sun young park Byeong-Kook son Baehyun Min Kyungbook Lee Department of Geoenvironmental Sciences Kongju National University Tunnel & Underground Facility Division ESCO Consultant & Engineers Company Yellow Sea Institute of Geoenvironmental Sciences Petroleum and Marine Research Division Korea Institute of Geoscience and Mineral Resources Department of Climate and Energy Systems Engineering Ewha Womans University Center for Climate/Environment Change Prediction Research Ewha Womans University

Gas hydrate(GH) is an unconventional resource estimated at 1000-120,000 trillion *** on GH is ongoing to determine its geological and flow characteristics for commercial production. After two large-scale drilling expeditions to study the GH-bearing zone in the Ulleung Basin, the mineral composition of 488 sediment samples was analyzed using X-ray diffraction(XRD). Because the analysis is costly and dependent on experts, a machine learning model was developed to predict the mineral composition using XRD intensity profiles as input data. However, the model's performance was limited because of improper preprocessing of the intensity profile. Because preprocessing was applied to each feature, the intensity trend was not preserved even though this factor is the most important when analyzing mineral composition. In this study, the profile was preprocessed for each sample using minmax scaling because relative intensity is critical for mineral analysis. For 49 test data among the 488data, the convolutional neural network(CNN) model improved the average absolute error and coefficient of determination by 41% and 46%, respectively, than those of CNN model with feature-based preprocessing. This study confirms that combining preprocessing for each sample with CNN is the most efficient approach for analyzing XRD data. The developed model can be used for the compositional analysis of sediment samples from the Ulleung Basin and the Korea Plateau. In addition, the overall procedure can be applied to any XRD data of sediments worldwide.

关键词： Sample-based preprocessing X-ray diffraction (XRD) Machine learning Mineral composition Gas hydrate (GH) Ulleung basin

Prominent cycling reversibility and kinetics enabled by CaTiO_(3) protective layer on Zn metal for aqueous Zn-ion batteries

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Journal of Energy Chemistry 2025年第1期100卷 245-258页

作者： Gaeun Lee Yong Nam Ahn Seongjoon so Chanwoo park Jong-Seong Bae Taehyun park Il Tae Kim Jaehyun Hur School of Chemical Biologicaland Battery EngineeringGachon UniversitySeongnamGyeonggi 13120Republic of Korea Busan Center Korea Basic Science InstituteBusan 46742Republic of Korea

Aqueous Zn-ion batteries (AZIBs) have received considerable attention owing to their various advantages such as safety,low cost,simple battery assembly conditions,and high ionic ***,they still suffer from serious problems,including uncontrollable dendrite growth,corrosion,hydrogen evolution reaction (HER) from water decomposition,electrode passivation,and unexpected *** creation of a uniform artificial nanocrystal layer on the Zn anode surface is a promising strategy for resolving these ***,we propose the use of a perovskite CaTiO_(3)(CTO) protective layer on Zn(CTO@Zn) as a promising approach for improving the performance of *** CTO artificial layer provides an efficient pathway for Zn ion diffusion towards the Zn metal because of the high dielectric constant (εr=180) and ferroelectric characteristics that enable the alignment of dipole moments and redistribute the Zn^(2+)ions in the CTO *** avoiding the direct contact of the Zn anode with the electrolyte solution,the uneven dendrite growth,corrosion,parasitic side reactions,and HER are mitigated,while CTO retains its mechanical and chemical robustness during ***,CTO@Zn demonstrates an improved lifespan in a symmetric cell configuration compared with bare ***@Zn shows steady overpotential (~68 m V) for 1500 h at 1 mA cm^(-2)/0.5 mA h cm^(-2),excelling bare ***,when paired with the V_(2)O_(5)-C cathode,the CTO@Zn//V_(2)O_(5)-C full battery delivers 148.4 mA h g^(-1)(based on the mass of the cathode) after 300 *** study provides new insights into Zn metal anodes and the development of high-performance AZIBs.

关键词： CaTiO_(3) Artificial layer Dielectric constant Znmetal anode Zinc aqueous battery

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Conversion of N-doped biochar from carotenoid-extracted Tetraselmis suecica and its application to produce supercapacitors

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Journal of Environmental Sciences 2025年第5期151卷 410-423页

作者： Se Hun Lee Kang Hyun Lee Sang-hwa Lee soo Kweon Lee Ok Sung Jeon young Pyo Jeon Dongpyo Hong young Joon Yoo Sang Yoon park Hah young Yoo Advanced Institute of Convergence Technology(AICT) Seoul National UniversitySuwon 16229Republic of Korea Department of Biotechnology Sangmyung University20 Hongjimun 2-GilJongno-GuSeoul 03016Republic of Korea Department of Bio-Convergence Engineering Dongyang Mirae University445-8Gyeongin-roGuro-guSeoul 08221Republic of Korea Fermentation team Lotte R&D Center210 Magokjungang-RoGangseo-GuSeoul 07594Republic of Korea School of Electronic Engineering Kyonggi UniversityGyeonggi-do 16227Republic of Korea

Microalgae are one of the promising feedstocks for biorefinery,contributing significantly to net-zero emissions through carbon capture and ***,the disposal of microalgal byproducts from the manufacturing process causes additional environmental pollution,thus,a new application strategy is *** this study,the Tetraselmis suecica byproduct from the carotenoid extraction process was carbonized and converted into *** converted biochar was proved to be nitrogen-doped biochar(NDB),up to 4.69%,with a specific surface area of 206.59m^(2)/g andwas used as an electrode for a *** NDB electrode(NDB-E)in half-cell showed a maximum specific capacitance of 191 F/*** a full-cell test,the NDB-E exhibited a high energy density of 7.396 Wh/kg and a high-power density of 18,100 W/kg,and maintained specific capacity of 95.5%after charge and discharge of 10,000 *** conclusion,our study demonstrated that the carotenoid-extracted microalgal byproducts are a useful resource for the supercapacitor *** approach is the first to convert *** into active materials for supercapacitors.

关键词： Microalgae Tetraselmis suecica Carbonization N-doped biochar Supercapacitor

Glucose-mediated mitochondrial reprogramming by cholesterol export at TM4SF5-enriched mitochondria-lysosome contact sites

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Cancer Communications 2024年第1期44卷 47-75页

作者： Ji Eon Kim so-young park Chulhwan Kwak Yoonji Lee Dae-Geun song Jae Woo Jung Haesong Lee Eun-Ae Shin Yangie Pinanga Kyung-hee Pyo Eun Hae Lee Wonsik Kim soyeon Kim Chang-Duck Jun Jeanho Yun Sun Choi Hyun-Woo Rhee Kwang-Hyeon Liu Jung Weon Lee Department of Pharmacy College of PharmacySeoul National UniversitySeoulRepublic of Korea Research Institute of Pharmaceutical Sciences College of PharmacySeoul National UniversitySeoulRepublic of Korea BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit College of Pharmacy and Research Institute of Pharmaceutical SciencesKyungpook National UniversityDaeguRepublic of Korea Department of Chemistry Seoul National UniversitySeoulRepublic of Korea College of Pharmacy Chung-Ang UniversitySeoulRepublic of Korea Natural Product Informatics Research Center Korea Institute of Science and Technology(KIST)Gangneung-siGangwon-doRepublic of Korea School of Life Sciences Gwangju Institute of Science and Technology(GIST)GwangjuRepublic of Korea Department of Biochemistry College of MedicineDong-A UniversityBusanRepublic of Korea Global AI Drug Discovery Center College of Pharmacy and Graduate School of Pharmaceutical SciencesEwha Womans UniversitySeoulRepublic of Korea Interdisciplinary Program in Genetic Engineering Seoul National UniversitySeoulRepublic of Korea

Background:Transmembrane 4 L six family member 5(TM4SF5)translocates subcellularly and functions metabolically,although it is unclear how intracellu-lar TM4SF5 translocation is linked to metabolic *** is thus of interests to understand how the traffic dynamics of TM4SF5 to subcellular endosomal membranes are correlated to regulatory roles of ***:Here,we explored the metabolic significance of TM4SF5 localization at mitochondria-lysosome contact sites(MLCSs),using in vitro cells and in vivo animal systems,via approaches by immunofluorescence,proximity labelling based proteomics analysis,organelle reconstitution ***:Upon extracellular glucose repletion following depletion,TM4SF5 became enriched at MLCSs via an interaction between mitochondrial FK506-binding protein 8(FKBP8)and lysosomal *** labeling showed molecular clustering of phospho-dynamic-related protein I(DRP1)and certain mitophagy receptors at TM4SF5-enriched MLCSs,leading to mitochondrial fis-sion and ***4SF5 bound NPC intracellular cholesterol transporter 1(NPC1)and free cholesterol,and mediated export of lysosomal cholesterol to mitochondria,leading to impaired oxidative phosphorylation but intact tri-carboxylic acid(TCA)cycle andβ-*** mouse models,hepatocyte Tm4sf5 promoted mitophagy and cholesterol transport to mitochondria,both with positive relations to liver ***:Our findings suggested that TM4SF5-enriched MLCSs regu-late glucose catabolism by facilitating cholesterol export for mitochondrial reprogramming,presumably while hepatocellular carcinogenesis,recapitulating aspects for hepatocellular carcinoma metabolism with mitochondrial repro-gramming to support biomolecule synthesis in addition to glycolytic energetics.

关键词： cholesterol fluorescent imaging glucose catabolism hepatocellular carcinogenesis mem-brane contact sites mitochondria function mitophagy oxidative phosphorylation protein-protein interaction tetraspanin

Immortalization of epidural fat-derived mesenchymal stem cells: In vitro characterization and adipocyte differentiation potential

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World Journal of Stem Cells 2025年第1期17卷 40-52页

作者： Seoung-Woo Lee young-Ju Lim Hee-Yeon Kim Wansoo Kim Wook-Tae park Min-Jung Ma Junho Lee Min-soo Seo young In Kim Sangbum park Seong-Kyoon Choi Gun Woo Lee Core Protein Resources Center Daegu-Gyeongbuk Institute of Science and TechnologyDaegu 42988South Korea Department of Orthopedic Surgery Yeungnam University Medical CenterYeungnam University College of MedicineDaegu 42415South Korea Department of Veterinary Pathology College of Veterinary MedicineKyungpook National UniversityDaegu 41566South Korea School of Life Science BK21 FOUR KNU Creative BioResearch GroupKyungpook National UniversityDaegu 41566South Korea Laboratory of Veterinary Tissue Engineering College of Veterinary MedicineKyungpook National UniversityDaegu 41566South Korea College of Veterinary Medicine Kyungpook National UniversityDaegu 41566South Korea Department of Veterinary Tissue Engineering Kyungpook National UniversityDaegu 41566South Korea Cellexobio. Ltd.Daegu 42415South Korea Michigan State University Institute for Quantitative Health Science&EngineeringEast LansingMI 48824United States Department of Orthopedic Surgery Yeungnam University College of MedicineDaegu 42415South Korea

BACKGROUND Mesenchymal stem cells(MSCs)are promising candidates for regenerative therapy due to their self-renewal capability,multilineage differentiation potential,and immunomodulatory *** molecular characteristics of MSCs are influenced by their ***,epidural fat(EF)and EF-derived MSCs(EF-MSCs)have garnered attention due to their potential benefits to the spinal microenvironment and their high expression of neural SC ***,their clinical applications are limited due to cell senescence and limited accessibility of *** many studies have attempted to establish an immortalized,stable SC line,the characteristics of immortalized EF-MSCs remain to be *** To establish and analyze stable immortalized *** The phenotypes of EF-MSCs were analyzed using optical *** immortalization was performed using lentiviral *** biomolecular characteristics of the cells were analyzed by immunoblotting,quantitative PCR,and *** The immortalized EF-MSCs demonstrated a significantly extended lifespan compared to the control group,with well-preserved adipogenic potential and SC surface marker *** of human telomerase reverse transcriptase genes markedly increased the lifespan of *** analysis revealed substantial increase in the expression of DNA replication pathway components in immortalized *** Immortalized EF-MSCs exhibited significantly enhanced proliferative capacity,retained adipogenic potential,and upregulated the expression of DNA replication pathway components.

关键词： Immortalization Transfection Stem cell Epidural fat Proteomics

RGB Color-Discriminable Photonic Synapse for Neuromorphic Vision System

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Nano-Micro Letters 2025年第4期17卷 39-62页

作者： Bum Ho Jeong Jaewon Lee Miju Ku Jongmin Lee Dohyung Kim Seokhyun Ham Kyu-Tae Lee young-Beom Kim Hui Joon park Department of Organic and Nano Engineering&Human-Tech Convergence Program Hanyang UniversitySeoul 04763Korea Department of Semiconductor Engineering Hanyang UniversitySeoul 04763Korea Department of Mechanical Engineering Hanyang UniversitySeoul 04763Korea Department of Physics Inha UniversityIncheon 22212Korea

To emulate the functionality of the human retina and achieve a neuromorphic visual system,the development of a photonic synapse capable of multispectral color discrimination is of paramount ***,attaining robust color discrimination across a wide intensity range,even irrespective of medium limitations in the channel layer,poses a significant ***,we propose an approach that can bestow the color-discriminating synaptic functionality upon a three-terminal transistor flash memory even with enhanced discriminating *** incorporating the strong induced dipole moment effect at the excitation,modulated by the wavelength of the incident light,into the floating gate,we achieve outstanding RGB color-discriminating synaptic functionality within a remarkable intensity range spanning from 0.05 to 40 mW cm^(-2).This approach is not restricted to a specific medium in the channel layer,thereby enhancing its *** effectiveness of this color-discriminating synaptic functionality is demonstrated through visual pre-processing of a photonic synapse array,involving the differentiation of RGB channels and the enhancement of image contrast with noise ***,a convolutional neural network can achieve an impressive inference accuracy of over 94%for Canadian-Institute-For-Advanced-Research-10 colorful image recognition task after the *** proposed approach offers a promising solution for achieving robust and versatile RGB color discrimination in photonic synapses,enabling significant advancements in artificial visual systems.

关键词： Organic field-effect transistor Photonic synapse Excited-state dipole moment RGB color discrimination Neuromorphic visual system

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