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Genetic, metabolic and environmental factors involved in the development of liver cirrhosis in Mexico

World Journal of Gastroenterology 2015年第41期21卷 11552-11566页

作者： Omar Ramos-Lopez Erika Martinez-Lopez Sonia Roman nora.a.fierro Arturo Panduro Department of Molecular Biology in Medicine Civil Hospital of Guadalajara "Fray Antonio Alcalde" Guadalajara Jalisco Mexico and Health Sciences Center University of Guadalajara

Liver cirrhosis(LC) is a chronic illness caused by inflammatory responses and progressive fibrosis. Globally, the most common causes of chronic liver disease include persistent alcohol abuse, followed by viral hepatitis infections and nonalcoholic fatty liver disease. However, regardless of the etiological factors, the susceptibility and degree of liver damage may be influenced by genetic polymorphisms that are associated with distinct ethnic and cultural backgrounds. Consequently, metabolic genes are influenced by variable environmental lifestyle factors, such as diet, physical inactivity, and emotional stress, which are associated with regional differences among populations. This Topic Highlight will focus on the genetic and environmental factors that may influence the metabolism of alcohol and nutrients in the setting of distinct etiologies of liver disease. The interaction between genes and environment in the current-day admixed population, Mestizo and Native Mexican, will be described. Additionally, genes involved in immune regulation, insulin sensitivity, oxidative stress and extracellular matrix deposition may modulate the degree of severity. In conclusion, LC is a complex disease. The onset, progression, and clinical outcome of LC among the Mexican population are influenced by specific genetic and environmental factors. Among these are an admixed genome with a heterogenic distribution of European, Amerindian and African ancestry; a high score of alcohol consumption; viral infections; a hepatopathogenic diet; and a high prevalence of obesity. The variance in risk factors among populations suggests that intervention strategies directed towards the prevention and management of LC should be tailored according to such population-based features.

关键词： Genomic medicine Polymorphisms Viral hepatitis Obe

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Immunologic, metabolic and genetic factors in hepatitis C virus infection

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World Journal of Gastroenterology 2014年第13期20卷 3443-3456页

作者： nora.a.fierro Karina Gonzalez-Aldaco Rafael Torres-Valadez Erika Martinez-Lopez Sonia Roman Arturo Panduro Department of Molecular Biology in Medicine Civil Hospital of Guadalajara"Fray Antonio Alcalde" and Health Sciences CenterUniversity of GuadalajaraGuadalajara 44280JaliscoMexico

The mechanisms that regulate disease progression during hepatitis C virus(HCV)infection and the response to treatment are not clearly *** studies have demonstrated that a strong host immune response against HCV favors HCV *** addition,genetic factors and metabolic machinery,particularly cholesterol modulation,are involved in HCV *** is likely that the interplay between all of these factors contributes to the outcome of HCV *** recent years,the world has experienced its largest epidemic of *** and the United States are the leading sufferers from this epidemic at the global *** is associated with the development ofnumerous pathologies including hypercholesterolemia which is one of the eight most important risk factors for mortality in *** may be related to the course of HCV infection in this ***,we focus on the urgent need to study the progression of HCV infection in relation to ethnic *** are discussed that hold promise in identifying immune,metabolic and genetic factors that,in conjunction,could be therapeutic targets or predictors of the progression of HCV infection.

关键词： Hepatitis C virus Immune response Lipids Metabolism Genetics

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Hepatitis B virus infection in Latin America:A genomic medicine approach

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World Journal of Gastroenterology 2014年第23期20卷 7181-7196页

作者： Sonia Roman Alexis Jose-Abrego nora Alma fierro Griselda Escobedo-Melendez Claudia Ojeda-Granados Erika Martinez-Lopez Arturo Puro Department of Molecular Biology in Medicine Civil Hospital of Guadalajara "Fray Antonio Alcalde" and University of GuadalajaraGuadalajaraJalisco 44280Mexico Immunovirology Unit Department of Molecular Biology in MedicineCivil Hospital of Guadalajara "Fray Antonio Alcalde" and University of GuadalajaraGuadalajaraJalisco 44280Mexico Viral Hepatitis Clinic Pediatric Infectious Disease UnitDepartment of Pediatric Hematology and OncologyCivil Hospital of Guadalajara "Juan I.Menchaca" and University of GuadalajaraGuadalajaraJalisco 44280Mexico

Hepatitis B virus(HBV)infection is the leading cause of severe chronic liver *** article provides a critical view of the importance of genomic medicine for the study of HBV infection and its clinical outcomes in Latin *** levels of evolutionary adaptation may correlate with the clinical outcomes of HBV *** in Latin America are predominantly of genotype H in Mexico and genotype F in Central and South America;these strains have historically circulated among the indigenous *** genotypes appear to be linked to a benign course of disease among the native and mestizo Mexicans and native South *** contrast,genotypes F,A and D are common in acute and chronic infections among mestizos with Caucasian *** carcinoma is rare in Mexicans,but it has been associated with genotype F1b among *** observation illustrates the significance of ascertaining the genetic and environmental factors involved in the development of HBV-related liver disease in Latin America,which contrast with those reported in other regions of the world.

关键词： Genomic medicine Hepatitis B virus Hepatitis B virus genotypes Latin America Mexico Central America South America

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Interplay between the glass and the gel transition

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Science China(Physics,Mechanics & Astronomy) 2019年第10期62卷 45-50页

作者： Annalisa fierro Antonio de Candia Antonio Coniglio CNR-SPIN c/o Complesso di Monte S.AngeloNapoli 80126Italy Dipartimento di Fisica"Pancini" Universita di Napoli"FedericoⅡ"Complesso di Monte S.AngeloNapoli 80126Italy

By changing the control parameters, many physical systems reach a slow dynamics regime followed by an arrested or a quasiarrested state. Examples, among others, are gels and glasses. In this paper, we discuss some experimental and theoretical results in polymer and colloidal systems, where gel and glass transitions interfere, and use models from Mode Coupling Theory（MCT）to illustrate the rich phenomenology observed. The continuous and the discontinuous transition lines, found in the MCT models,are considered suitable to describe respectively the gel and the glass transitions, so we suggest that the interplay between gel and glass may be interpreted in terms of the F13 MCT model, clarifying also the origin of logarithmic decays often observed in such systems. In particular, the theoretical predictions of the MCT in the F13 model are compared with Molecular Dynamics simulations in model systems for chemical gels and charged colloids.

关键词： glass gel and sol colloid

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CD36 genetic variation, fat intake and liver fibrosis in chronic hepatitis C virus infection

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World Journal of Hepatology 2016年第25期8卷 1067-1074页

作者： Omar Ramos-Lopez Sonia Roman Erika Martinez-Lopez nora.a.fierro Karina Gonzalez-Aldaco Alexis Jose-Abrego Arturo Panduro Department of Molecular Biology in Medicine Civil Hospital of Guadalajara "Fray Antonio Alcalde" Health Sciences University Center University of Guadalajara

AIM To analyze the association of the CD36 polymorphism(rs1761667) with dietary intake and liver fibrosis(LF) in chronic hepatitis C(CHC) patients. METHODS In this study, 73 patients with CHC were recruited. The CD36 genotype(G > A) was determined by a TaqM an real-time PCR system. Dietary assessment was carried out using a three-day food record to register the daily intake of macronutrients. Serum lipids and liver enzymes were measured by a dry chemistry assay. LF evaluated by transient elastography(Fibroscan~)and APRI score was classified as mild LF(F1-F2) and advanced LF(F3-F4).RESULTS Overall, the CD36 genotypic frequencies were AA(30.1%), AG(54.8%), and GG(15.1%), whereas the allelic A and G frequencies were 57.5% and 42.5%, respectively. CHC patients who were carriers of the CD36 AA genotype had a higher intake of calories attributable to total fat and saturated fatty acids than those with the non-AA genotypes. Additionally, aspartate aminotransferase(AST) serum values were higher in AA genotype carriers compared to non-AA carriers(91.7 IU/L vs 69.8 IU/L, P = 0.02). Moreover, the AA genotype was associated with an increase of 30.23 IU/L of AST(β = 30.23, 95%CI: 9.0-51.46, P = 0.006). Likewise, the AA genotype was associated with advanced LF compared to the AG(OR = 3.60, 95%CI: 1.16-11.15, P = 0.02) or AG + GG genotypes(OR = 3.52, 95%CI: 1.18-10.45, P = 0.02).CONCLUSION This study suggests that the CD36(rs1761667) AA genotype is associated with higher fat intake and more instances of advanced LF in CHC patients.

关键词： Hepatitis C virus infection CD36 receptor Lipids Liver fibrosis Mexico

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Inhibition of autophagy rescues HT22 hippocampal neurons from erastin-induced ferroptosis

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Neural Regeneration Research 2023年第7期18卷 1548-1552页

作者： nora Hanke Abdelhaq Rami Institut für Experimentelle Neurobiologie(Anatomie Ⅱ) Klinikum der Johann Wolfgang von Goethe-UniversitätTheodor-Stern-Kai 760590 Frankfurt/MainGermany

Ferroptosis is a regulated form of cell death which is considered an oxidative iron-dependent *** lipid hydroperoxidase glutathione peroxidase 4 prevents the iron(Fe2+)-dependent formation of toxic lipid reactive oxygen *** emerging evidence indicates that inhibition of glutathione peroxidase 4 as a hallmark of ferroptosis in many cancer cell lines,the involvement of this biochemical pathway in neuronal death remains largely ***,we investigate,first whether the ferroptosis key players are involved in the neuronal cell death induced by *** second objective was to examine whether there is a cross talk between ferroptosis and *** third main was to address neuron response to erastin,with a special focus on ferritin and nuclear receptor coactivator 4-mediated *** test this in neurons,erastin(0.5-8μM)was applied to hippocampal HT22 neurons for 16 *** addition,cells were cultured with the autophagy inhibitor,3-methyladenin(10 mM)and/or ferroptosis inhibitors,ferrostatin 1(10-20μM)or deferoxamine(10-200μM)before exposure to *** this study,we demonstrated by immunofluorescence and western blot analysis,that erastin downregulates dramatically the expression of glutathione peroxidase 4,the sodium-independent cystine-glutamate antiporter and nuclear receptor coactivator *** protein levels of ferritin and mitochondrial ferritin in HT22 hippocampal neurons did not remarkably change following erastin *** addition,we demonstrated that not only the ferroptosis inhibitor,ferrostatin1/deferoxamine abrogated the ferroptotic cell death induced by erastin in hippocampal HT22 neurons,but also the potent autophagy inhibitor,*** conclude that(1)erastin-induced ferroptosis in hippocampal HT22 neurons,despite reduced nuclear receptor coactivator 4 levels,(2)that either nuclear receptor coactivator 4-mediated ferritinophagy does not occur or is of secondary importance in this model,(3)that ferroptos

关键词： erastin ferritin ferritinophagy ferroptosis glutathione peroxidase 4 HT22 neurons nuclear receptor coactivator 4

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A particle shape-based segmentation method to characterize spray dried materials by X-Ray microtomography

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Particuology 2023年第10期81卷 119-127页

作者： nora Alina Ruprecht Heike Teichmann Reinhard Kohlus University of Hohenheim Institute of Food Science and BiotechnologyDepartment of Process Engineering and Food PowdersGarbenstr.2570599StuttgartGermany

For accurate description of particle structure,single particle properties are required so that the properties of interest can be expressed as distributed parameters.X-Ray microtomography of the powder bed with subsequent particle separation can be used for this *** this paper,a new algorithm for X-Ray microtomography images of spray dried particles was introduced since standard methods tend to fail if the particle size distribution is *** algorithm is based on 2D shape classification and subsequent 3D reconstitution of the particle using only a shape classifier as free *** proposed algorithm was validated *** the algorithm,single particle porosities were obtained,which ranged from 0 to 70%.Prerequisites for the application of the algorithm are that a shape classifier can be set and that the 3D shape is regular.

关键词： Spray drying Particle structure X-Ray microtomography Segmentation algorithm Porosity distribution

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Rethinking cytokine function during hepatitis A and hepatitis C infections

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Advances in Bioscience and Biotechnology 2013年第7期4卷 13-18页

作者： nora A. fierro Flor P. Castro-Garcia Arturo Panduro Unidad de Inmunovirologia Hospital Civil de Guadalajara Fray Antonio Alcalde Guadalajara Mexico Universidad de Guadalajara Guadalajara Mexico Universidad de Guadalajara Guadalajara Mexico Servicio de Biologia Molecular en Medicina Hospital Civil de Guadalajara Fray Antonio Alcalde Guadalajara Mexico

Hepatitis A virus (HAV) and hepatitis C virus (HCV) are both viruses with hepatotropic lifestyles. HAV induces an acute infection that results in the elimination of the virus by the host whereas HCV is typically able to establish a persistent infection that may result in cirrhosis and hepatocellular carcinoma. The mechanisms responsible for this difference are unknown. However, given HAV and HCV are both non-cytophatic viruses, the observed symptoms and liver injury during the infections are the result of specific immune responses under the control of cytokines. Thus, the production of cytokines during hepatotropic viral infections may constitute a mechanism leading to different outcomes. Therefore, understanding the differences in the cytokine patterns induced in response to HAV and HCV is likely to provide important insights into the cytokine-mediated mechanisms underlying the long-term persistence of HCV, the broad spectrum of clinical manifestations induced by HAV and the resolution of HAV infection during the acute phase. Herein, we focus on discoveries that hold promise in identifying cytokines as therapeutic targets for the treatment of viral hepatitis.

关键词： Hepatitis A Virus Hepatitis C Virus Cytokines

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An optimized Parkinson’s disorder identification through evolutionary fast learning network

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International Journal of Intelligent Computing and Cybernetics 2022年第3期15卷 383-400页

作者： Bouslah Ayoub Taleb nora LRI Laboratory Computer Science DepartmentUniversity of BadjiMokhtar AnnabaAnnabaAlgeria Complex System Engineering Laboratory Computer Science DepartmentUniversity of Badji Mokhtar AnnabaAnnabaAlgeria

Purpose-Parkinson’s disease(PD)is a well-known complex neurodegenerative ***,its identification is based on motor disorders,while the computer estimation of its main symptoms with computational machine learning(ML)has a high exposure which is supported by researches ***,ML approaches required first to refine their parameters and then to work with the best model *** process often requires an expert user to oversee the performance of the ***,an attention is required towards new approaches for better forecasting ***/methodology/approach-To provide an available identification model for Parkinson disease as an auxiliary function for clinicians,the authors suggest a new evolutionary classification *** core of the prediction model is a fast learning network(FLN)optimized by a genetic algorithm(GA).To get a better subset of features and parameters,a new coding architecture is introduced to improve GA for obtaining an optimal FLN ***-The proposed model is intensively evaluated through a series of experiments based on Speech and HandPD benchmark *** very popular wrappers induction models such as support vector machine(SVM),K-nearest neighbors(KNN)have been tested in the same *** results support that the proposed model can achieve the best performances in terms of accuracy and ***/value-A novel efficient PD detectionmodel is proposed,which is called *** A-W-FLN utilizes FLN as the base classifier;in order to take its higher generalization ability,and identification capability is alsoembedded to discover themost suitable featuremodel in the detection ***,the proposedmethod automatically optimizes the FLN’s architecture to a smaller number of hidden nodes and solid connecting *** helps the network to train on complex PD datasets with non-linear features and yields superior result.

关键词： Parkinson’s disease(PD) Fast learning network(FLN) Genetic algorithm(GA) Speech and handwriting patterns PD identification system

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Abiotic and biotic constituents of oil sands process-affected waters

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Journal of Environmental Sciences 2023年第5期127卷 169-186页

作者： nora A.S.Hussain James L.Stafford Department of Biological Sciences University of AlbertaEdmontonAlberta T6G 2N8Canada

The oil sands in Northern Alberta are the largest oil sands in the world,providing an important economic resource for the Canadian energy *** extraction of petroleum in the oil sands begins with the addition of hot water to the bituminous sediment,generating oil sands process-affected water(OSPW),which is acutely toxic to *** of litres of OSPW are stored on oil sands mining leased sites in man-made reservoirs called tailings *** the volume of OSPW increases,concerns arise regarding the reclamation and eventual release of this water back into the *** is composed of a complex and heterogeneous mix of components that vary based on factors such as company extraction techniques,age of the water,location,and bitumen ore ***,the effective remediation of OSPW requires the consideration of abiotic and biotic constituents within it to understand short and long term effects of treatments *** review summarizes selected chemicals and organisms in these waters and their interactions to provide a holistic perspective on the physiochemical and microbial dynamics underpinning OSPW.

关键词： OSPW toxicants Reclamation Tailings ponds Remediation Microbial AOPs Bioremediation

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