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Multidecadal Trends in Large-Scale Annual Mean SATa Based on CMIP5 Historical Simulations and Future Projections

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Engineering 2017年第1期3卷 136-143页

作者： Nan Xing jianping Li lanning Wang College of Global Change and Earth System Science Beijing Normal University Belting 100875 China Belting Meteorological Observatory Belting 100089 China joint Center for Global Change Studies Beijing 100875 China

Based on observations and Coupled Model lntercomparison Project Phase 5 （CMIP5） results, multidecadal variations and trends in annual mean surface air temperature anomalies （SATa） at global, hemispheric, and hemispheric land and ocean scales in the past and under the future scenarios of two representative concentration pathways （RCPs） are analyzed. Fifteen models are selected based on their performances in capturing the temporal variability, long-term trend, multidecadal variations, and trends in global annual mean SATa. Observational data analysis shows that the multidecadal variations in annual mean SATa of the land and ocean in the northern hemisphere （NH） and of the ocean in the southern hemisphere （SH） are similar to those of the global mean, showing an increase during the 1900-1944 and 1971-2000 periods, and flattening or even cooling during the 1945-1970 and 2001-2013 periods. These observed characteristics are basically reproduced by the models. However, SATa over SH land show an increase during the 1945-1970 period, which differs from the other hemispheric scales, and this feature is not captured well by the models. For the recent hiatus period （2001-2013）, the projected trends of BCC-CSM1-1-m, CMCC-CM, GFDL-ESM2M, and NorESM1-ME at the global and hemispheric scales are closest to the observations based on RCP4.5 and RCP8.5 scenarios, suggesting that these four models have better projection capability in SATa. Because these four models are better at simulating and projecting the multidecadal trends of SATa, they are selected to analyze future SATa variations at the global and hemispheric scales during the 2006-2099 period. The selected multi-model ensemble （MME） projected trends in annual mean SATa for the globe, NH, and SH under RCP4.5 （RCP8.5） are 0.17 （0.29） ℃, 0.22 （0.36） ℃, and 0.11 （0.23） ℃-decade-1 in the 21st century, respectively. These values are significantly lower than the projections of CMIP5 MME without model selection.

关键词： Surface air temperature anomalies (SATa) Multidecadal trend Coupled Model lntercomparison Project Phase 5 (CMIPS) Projection

Validating neural networks for spectroscopic classification on a universal synthetic dataset

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npj Computational Materials 2023年第1期9卷 1325-1336页

作者： jan Schuetzke nathan j.Szymanski Markus Reischl Institute for Automation and Applied Informatics Karlsruhe Institute of TechnologyKarlsruhe 76131Germany Department of Materials Science&Engineering Lawrence Berkeley National LaboratoryBerkeleyCA 94720USA Department of Materials Science&Engineering UC BerkeleyBerkeleyCA 94720USA

To aid the development of machine learning models for automated spectroscopic data classification,we created a universal synthetic dataset for the validation of their *** dataset mimics the characteristic appearance of experimental measurements from techniques such as X-ray diffraction,nuclear magnetic resonance,and Raman spectroscopy among *** applied eight neural network architectures to classify artificial spectra,evaluating their ability to handle common experimental *** all models achieved over 98%accuracy on the synthetic dataset,misclassifications occurred when spectra had overlapping peaks or *** found that non-linear activation functions,specifically ReLU in the fully-connected layers,were crucial for distinguishing between these classes,while adding more sophisticated components,such as residual blocks or normalization layers,provided no performance *** on these findings,we summarize key design principles for neural networks in spectroscopic data classification and publicly share all scripts used in this study.

关键词： spectroscopic adding classify

Functional perspectives on tropical tree demography and forest dynamics

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Ecological Processes 2019年第1期8卷 1-11页

作者： Samantha j.Worthy nathan G.Swenson Department of Biology University of MarylandCollege ParkMD 20742USA

Disentangling the processes that drive population,community and whole forest structure and dynamics is a *** becomes a grand challenge in the tropics where there are a large number of species,small population sizes,less research infrastructure,and a relatively smaller number of researchers compared to the temperate *** this grand challenge,we argue,requires detailed knowledge of the functioning of individuals and *** this end,researchers frequently employ plant functional traits to study tree populations and ***,we review this approach by first providing a basic background regarding the major trait axes generally of *** then discuss how these axes may be or have been applied from ecosystem to community and population *** doing so,we highlight where the functional trait research program has failed in tropical tree ecology and where it can be improved or ***,we provide a perspective regarding how functional trait and emerging‘omics approaches can be integrated to address large questions facing the *** intention throughout is to provide an entryway into this literature for an early career researcher rather than a comprehensive review of all possible studies that have taken place in tropical forests.

关键词： Demographic rate Functional diversity Functional trait Transcriptome Tropical forest Tropical rain forest

Small molecule fluorescent probes of protein vicinal dithiols

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Chinese Chemical Letters 2019年第10期30卷 1704-1716页

作者： Guodong Hu Huiyi jia lanning Zhao Dong-Hyung Cho jianguo Fang State Key Laboratory of Applied Organic Chemistry College of Chemistry and Chemical EngineeringLanzhou UniversityLanzhou 730000China School of Life Sciences Kyungpook National UniversityDaegu 41566Republic of Korea

The vicinal dithiol motif is widely present in proteins, and is critical for proteins’ structures and *** recent years, a variety of fluorescent probes with high specificity and outstanding optical properties for sensing protein vicinal dithiols have been developed. In this review, we summarized the fluorescent probes of protein vicinal dithiols in literature. These probes are classified into four types based on their acceptor sites, i.e., biarsenical probes, monoarsenical probes, dimaleimide probes and diacrylate *** analyzing the properties of different probes, we expect that this review would help readers further understand the structural factors of these probes and provide the design strategy for novel fluorescent probes with improved properties.

关键词： Fluorescent probe Protein vicinal dithiols Arsenical probe Thiol redox Reaction-based probe

Adaptively driven X-ray diffraction guided by machine learning for autonomous phase identification

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npj Computational Materials 2023年第1期9卷 2036-2043页

作者： nathan j.Szymanski Christopher j.Bartel Yan Zeng Mouhamad Diallo Haegyeom Kim Gerbrand Ceder Department of Materials Science&Engineering UC BerkeleyBerkeleyCA 94720USA Materials Sciences Division Lawrence Berkeley National LaboratoryBerkeleyCA 94720USA

Machine learning(ML)has become a valuable tool to assist and improve materials characterization,enabling automated interpretation of experimental results with techniques such as X-ray diffraction(XRD)and electron *** ML models are fast once trained,there is a key opportunity to bring interpretation in-line with experiments and make on-the-fly decisions to achieve optimal measurement effectiveness,which creates broad opportunities for rapid learning and information extraction from ***,we demonstrate such a capability with the development of autonomous and adaptive *** coupling an ML algorithm with a physical diffractometer,this method integrates diffraction and analysis such that early experimental information is leveraged to steer measurements toward features that improve the confidence of a model trained to identify crystalline *** validate the effectiveness of an adaptive approach by showing that ML-driven XRD can accurately detect trace amounts of materials in multi-phase mixtures with short measurement *** improved speed of phase detection also enables in situ identification of short-lived intermediate phases formed during solid-state reactions using a standard in-house *** findings showcase the advantages of in-line ML for materials characterization and point to the possibility of more general approaches for adaptive experimentation.

关键词： phase diffraction autonomous

Iron and non-alcoholic fatty liver disease

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World journal of Gastroenterology 2016年第36期22卷 8112-8122页

作者： Laurence j Britton V nathan Subramaniam Darrell HG Crawford Gallipoli Medical Research Institute The University of Queensland Greenslopes Private Hospital Brisbance Queensland 4120 Australia The Princess Alexandra Hospital Queensland 4120 Australia QIMR Berghofer Medical Research Institute Queensland 4120 Australia

The mechanisms that promote liver injury in non-alcoholic fatty liver disease(NAFLD) are yet to be thoroughly elucidated. As such, effective treatment strategies are lacking and novel therapeutic targets are required. Iron has been widely implicated in the pathogenesis of NAFLD and represents a potential target for treatment. Relationships between serum ferritin concentration and NAFLD are noted in a majority of studies, although serum ferritin is an imprecise measure of iron loading. Numerous mechanisms for a pathogenic role of hepatic iron in NAFLD have been demonstrated in animal and cell culture models. However, the human data linking hepatic iron to liver injury in NAFLD is less clear, with seemingly conflicting evidence, supporting either an effect of iron in hepatocytes or within reticulo-endothelial cells. Adipose tissue has emerged as a key site at which iron may have a pathogenic role in NAFLD. Evidence for this comes indirectly from studies that have evaluated the role of adipose tissue iron with respect to insulin resistance. Adding further complexity, multiple strands of evidence support an effect of NAFLD itself on iron metabolism. In this review, we summarise the human and basic science data that has evaluated the role of iron in NAFLD pathogenesis.

关键词： Iron Fatty liver Liver steatosis Insulin resistance Steatohepatitis Diabetes mellitus Adipose tissue

Use of donepezil for neurocognitive recovery after brain injury in adult and pediatric populations:a scoping review

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Neural Regeneration Research 2024年第8期19卷 1686-1695页

作者： Avery L.Miller nathan K.Evanson j.Michael Taylor University of Cincinnati College of Medicine CincinnatiOHUSA Department of Pediatrics University of CincinnatiCincinnatiOHUSA Department of Neurology and Rehabilitation Medicine University of CincinnatiCincinnatiOHUSA Division of Pediatric Rehabilitation Medicine Cincinnati Children’s Hospital Medical CenterCincinnatiOHUSA Division of Neurology Cincinnati Children’s Hospital Medical CenterCincinnatiOHUSA

There are few pharmacologic options for the treatment of cognitive deficits associated with traumatic brain injury in pediatric *** inhibitors such as donepezil have been evaluated in adult patients after traumatic brain injury,but relatively less is known about the effect in pediatric *** goal of this review is to identify knowledge gaps in the efficacy and safety of acetylcholinesterase inhibito rs as a potential a djuvant treatment fo r neurocognitive decline in pediatric patients with traumatic brain *** queried PubMed to identify literature published from database inception thro ugh june 2023 desc ribing the use of donepezil in young adult traumatic brain injury and pediatric patients with predefined *** on preselected search criteria,340 unique papers we re selected for title and abstra ct ***-two reco rds were reviewed in full after eliminating preclinical studies and pape rs outside the scope of the *** adult traumatic brain injury,we review results from 14 papers detailing 227 subjects where evidence suggests donepezil is well tole rated and shows both objective and patient-reported efficacy for reducing cognitive *** children,3 pape rs report on 5 children recovering from traumatic brain injury,showing limited *** additional 15 pediatric studies conducted in populations at risk for cognitive dysfunction provide a broader look at safety and efficacy in 210 patients in the pediatric age *** its promise for efficacy in adults with traumatic brain injury and tole rability in pediatric patients,we believe further study of donepezil for children and adolescents with traumatic brain injury is warranted.

关键词： acetylcholinesterase inhibitor adult cognition donepezil pediatrics traumatic brain injury

Differential effects of two dominant plant species on community structure and invasibility in an old-field ecosystem

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journal of Plant Ecology 2011年第3期4卷 123-131页

作者： Lara Souza jake F.Weltzin nathan j.Sanders Department of Ecology and Evolutionary Biology University of Tennessee1416 Circle DriveKnoxvilleTN 37996USA USA National Phenology Network National Coordinating Office1955 East 6th StreetTucsonAZ 85719USA

Aims In this study,we examined the effects of Solidago altissima(hereafter Solidago)and two species in the genus Verbesina,Verbesina virginica and Verbesina occidentalis(hereafter Verbesina),on the structure of an old-field plant community and establishment by an invasive plant species,Lespedeza cuneata(hereafter Lespedeza).Methods We removed Solidago,Verbesina and both Solidago and Verbesina from 4m^(-2)plots in an intact old-field community during two growing *** then quantified the effects of these removals on richness,evenness,diversity and composition of the subdominant plant *** also measured the total aboveground biomass and the aboveground biomass of the subdominant *** assess how these removals affected establishment by Lespedeza,we planted 20 seeds in each plot and tracked seedling emergence and survival for one growing *** Findings Subdominant community evenness and Shannon diversity were higher in plots from which Solidago and Verbesina were removed relative to control ***,there were no effects of dominant species removal on species richness or composition of the subdominant *** aboveground biomass was not affected by dominant species removal,suggesting that the community of subdominant species exhibited *** fact,subdominant community biomass was greater when Solidago,but not Verbesina,was *** availability was also greater in plots where Solidago was removed relative to control plots throughout the growing *** addition,removal of dominant species,in particular Solidago,indirectly reduced the emergence,but not survival,of Lespedeza seedlings by directly promoting subdominant community *** together,our results suggest that dominant old-field plant species affect subdominant community structure and indirectly promote establishment by Lespedeza.

关键词： compensation establishment invasive Lespedeza cuneata Solidago Verbesina

PIV measurements of turbulent jets issuing from triangular and circular orifice plates

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Science China(Physics,Mechanics & Astronomy) 2013年第6期56卷 1176-1186页

作者： XU MinYi ZHANG jianPeng MI jianChun nathan G j KALT P A M Marine Engineering College Dalian Maritime University State Key Laboratory of Turbulence & Complex Systems College of EngineeringPeking University Centre for Energy Technology and School of Mechanical Engineering University of AdelaideSA 5005Australia

The present study experimentally investigated the near-field flow mixing characteristics of two turbulent jets issuing from equilateral triangular and circular orifice plates into effectively unbounded surroundings,*** particle image velocimetry(PIV) was applied to measure the velocity field at the same Reynolds number of Re=50,000,where Re = UeDe /with Ue being the exit bulk velocity and the kinematic viscosity of fluid,D e the equivalent *** instantaneous velocity,mean velocity,Reynolds stresses were *** the mean velocity field,the centreline velocity decay rate and half-velocity width were *** the mixing characteristics of the two jets,it is found that the triangular jet has a faster mixing rate than the circular *** triangular jet entrainments with the ambient fluid at a higher rate in the near *** is evidenced by a shorter unmixed core,faster Reynolds stress and centreline turbulence intensity *** primary coherent structures in the near field are found to break down more rapidly in the triangular jet as compared to the circular *** the entire measurement region,the triangular jet maintained a higher rate of decay and ***,all components of Reynolds stress of the triangular jet appear to reach their peaks earlier,and then decay more rapidly than those of the circular *** addition,the axis-switching phenomenon is observed in the triangular jet.

关键词： triangular jet turbulent mixing coherent structures axis-switching