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CRISPR-Cas-based plant genome engineering goes viral

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Molecular Plant 2023年第4期16卷 660-661页

作者： jose-antonio Daros Fabio Pasin Fernando Merwaiss Instituto de Biologia Molecular y Celular de Plantas(CSiC-Universitat Politecnica deValencia) 46022ValenciaSpain

Biotechnological advances in the field of plant biology based on the bacterial and archaeal CRiSPR-Cas systems promise a new generation of crop plants that are more productive and nutritive,resistant to pest and pathogens,and better adapted to environmental ***,application of this technology in plants still encounters some burdens,especially related to the expression of the CRISPR-Cas reaction components in plant cells.

关键词： plant CRISPR adapted

Genetic and experimental evidence for the involvement of the CD6 lymphocyte receptor in psoriasis

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Cellular & Molecular Immunology 2018年第10期15卷 898-906页

作者： Marta Consuegra-Fernández Marc Julià Mario Martínez-Florensa Fernando Aranda Cristina Català Noelia Armiger-Borràs María-Teresa Arias Francisca Santiago antonio Guilabert Anna Esteve Carlos Muñoz Carlos Ferrándiz josé-Manuel Carrascosa Edurne Pedrosa Jorge Romaní MercèAlsina josé-Manuel Mascaró-Galy Francisco Lozano Immunoreceptores del Sistema Innat i Adaptatiu Institut d'Investigacions Biomèdiques August Pi i Sunyer(IDIBAPS)Barcelona 08036Spain Servicio de Dermatologia Hospital Universitario de BasurtoBilbao 48013Spain Servei d’Immunologia Centre de Diagnòstic BiomèdicHospital Clínic de BarcelonaBarcelona 08036Spain Servei de Dermatologia Hospital General de GranollersBarcelona 08402Spain Centre d’Estudis Epidemiològics sobre les ITS i Sida de Catalunya(CEEISCAT) ASPCCIBER Epidemiologia y Salud PúblicaBadalona 08916Spain Servei de Dermatologia Hospital Universitari Germans Trias i PujolBadalona 08916Spain Laboratori d’Immunobiologia per Investigaciói Aplicacions al Diagnòstic Banc de Sang i Teixits(BST)Institut d’Investigacióen Ciències de la Salut Germans Trias i PujolDepartament de Biologia Cel·lularFisiologia i ImmunologiaUniversitat Autònoma de BarcelonaBellaterra 08193Spain Servei de Dermatologia Consorci Sanitari Parc Taulí08208 Sabadell.Universitat Autónoma de BarcelonaBellaterra 08193Spain Servei de Dermatologia Hospital Clínic de BarcelonaBarcelona 08036Spain Departament de Biomedicina Universitat de BarcelonaBarcelona 08036Spain

Psoriasis is a chronic inflammatory skin disease with a strong genetic background and is triggered by environmental *** evidence supports CD6,a lymphocyte surface receptor mostly expressed by T cells,as a putative target in ***,a humanized anti-CD6 antibody has been assayed for the treatment of certain autoimmune disorders,including ***,we present novel evidence in mice and humans for a direct involvement of CD6 in psoriasis ***,an attenuated form of imiquimod-induced psoriasis-like skin inflammation was demonstrated in CD6-deficient mice,as deduced from lower epidermal thickness and local reduced production of pro-inflammatory cytokines,namely,***,isolated CD4+CD62L+T cells from CD6-deficient mice displayed decreased in vitro T-helper type 17 ***,a statistically significant association between CD6 single-nucleotide polymorphisms(rs17824933,rs11230563 and rs12360861)and more severe forms of psoriasis was demonstrated in a cohort of 304 patients at three public hospitals from the metropolitan area of *** together,these results provide new supportive evidence of the contribution of the CD6 lymphocyte receptor in psoriasis at both experimental and clinical levels.

关键词： ALCAM CD5 CD6 lymphocyte psoriasis

Development of a vehicle-track interaction model to predict the vibratory benefits of rail grinding in the time domain

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Journal of Modern Transportation 2015年第3期23卷 189-201页

作者： Julia Irene Real Clara Zamorano josé Luis Velarte antonio Enrique Blanco University Institute for Multidisciplinary Mathematics Polytechnic University of Valencia Foundation for the Research and Engineering in Railways

Imperfections in the wheel-rail contact are one of the main sources of generation of railway vibrations. Consequently, it is essential to take expensive corrective maintenance measures, the results of which may be unknown. In order to assess the effectiveness of these measures, this paper develops a vehicle-track interaction model in the time domain of a curved track with presence of rail corrugation on the inner rail. To characterize the behavior of the track, a numerical finite element model is developed using ANSYS software, while the behavior of the vehicle is characterized by a unidirectional model of two masses developed with VAMPIRE PRO software. The overloads obtained with the dynamic model are applied to the numerical model and then, the vibrational response of the track is obtained. Results are validated with real data and used to assess the effectiveness of rail grinding in the reduction of wheel-rail forces and the vibration generation phenomenon.

关键词： Corrugation · Dynamic overloads · Finiteelement method · Vibrations

Role of artificial intelligence in multidisciplinary imaging diagnosis of gastrointestinal diseases

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World Journal of Gastroenterology 2021年第27期27卷 4395-4412页

作者： M Alvaro Berbís josé Aneiros-Fernández F Javier Mendoza Olivares Enrique Nava antonio Luna Department of R&D HT MédicaMadrid 28046MadridSpain Department of Pathology Hospital Universitario Clínico San CecilioGranada 18012Spain Department of Gastroenterology Fatima ClinicSevilla 41012Spain Department of Communications Engineering University of MálagaMalaga 29016Spain MRI Unit Department of RadiologyHT MédicaJaén 23007Spain

The use of artificial intelligence-based tools is regarded as a promising approach to increase clinical efficiency in diagnostic imaging,improve the interpretability of results,and support decision-making for the detection and prevention of ***,endoscopy and pathology images are suitable for deep-learning analysis,potentially changing the way care is delivered in *** aim of this review is to examine the key aspects of different neural network architectures used for the evaluation of gastrointestinal conditions,by discussing how different models behave in critical tasks,such as lesion detection or characterization(*** distinction between benign and malignant lesions of the esophagus,the stomach and the colon).To this end,we provide an overview on recent achievements and future prospects in deep learning methods applied to the analysis of radiology,endoscopy and histologic whole-slide images of the gastrointestinal tract.

关键词： Artificial intelligence Machine learning Radiology Endoscopy Pathology Gastroenterology

Digital Soil Mapping Using Artificial Neural Networks and Terrain-Related Attributes

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Pedosphere 2015年第4期25卷 580-591页

作者： Mohsen BAGHERI BODAGHABADI josé antonio MARTInez-CASASNOVAS Mohammad Hasan SALEHI Jahangard MOHAMMADI Isa ESFANDIARPOOR BORUJENI Norair TOOMANIAN Amir GANDOMKAR Department of Geography Najafabad Branch Islamic Azad University Department of Environmental and Soil Science University of Lleida Department of Soil Science College of Agriculture Shahrekord University Department of Soil Science College of Agriculture Vali-e-Asr University Agriculture and Natural Resource Research Center

Detailed soil surveys involve costly and time-consuming work and require expert knowledge. Since soil surveys provide information to meet a wide range of needs, new methods are necessary to map soils quickly and accurately. In this study, multilayer perceptron artificial neural networks(ANNs) were developed to map soil units using digital elevation model(DEM) attributes. Several optimal ANNs were produced based on a number of input data and hidden units. The approach used test and validation areas to calculate the accuracy of interpolated and extrapolated data. The results showed that the system and level of soil classification employed had a direct effect on the accuracy of the results. At the lowest level, smaller errors were observed with the World Reference Base(WRB)classification criteria than the Soil Taxonomy(ST) system, but more soil classes could be predicted when using ST(7 soils in the case of ST vs. 5 with WRB). Training errors were below 11% for all the ANN models applied, while the test error(interpolation error) and validation error(extrapolation error) were as high as 50% and 70%, respectively. As expected, soil prediction using a higher level of classification presented a better overall level of accuracy. To obtain better predictions, in addition to DEM attributes, data related to landforms and/or lithology as soil-forming factors, should be used as ANN input data.

关键词： digital elevation model attributes multilayer perceptron soil classification soil-forming factors soil survey

Acceptance of living liver donation among medical students: A multicenter stratified study from Spain

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World Journal of Gastroenterology 2016年第25期22卷 5800-5813页

作者： antonio Ríos Ana Isabel López-Navas Ana Isabel López-López Francisco Javier Gómez Jorge Iriarte Rafael Herruzo Gerardo Blanco Francisco Javier Llorca Angel Asunsolo Pilar Sánchez-Gallegos Pedro Ramón Gutiérrez Ana Fernández María Teresa de Jesús Laura Martínez-Alarcón Alberto Lana Lorena Fuentes Juan Ramón Hernández Julio Virseda josé Yelamos josé antonio Bondía antonio Miguel Hernández Marco antonio Ayala Pablo Ramírez Pascual Parrilla International Collaborative Donor Project ('Proyecto Colaborativo Internacional Donante' 30007 Casillas Murcia Spain Department of Surgery Paediatrics Obstetrics and Gynaecology University of Murcia Avenida de las Fuerzas Armadas 30800 Espinardo Murcia Spain Transplant Unit Surgery Service IMIB - Virgen de la Arrixaca University Hospital Carretera Madrid-Cartagena s/n 30120 El Palmar Murcia Spain Regional Transplant Centre Consejeria de Sanidad y Consumo de la Region de Murcia 30008 Ronda de Levante Murcia Spain Hospital Clinico Universitario Virgen de la Arrixaca Departamento de Cirugia General y del Aparato Digestivo Unidad de Trasplantes 30007 Casillas Murcia Spain Department of Psychology Universidad Catolica San Antonio (UCAM) Avenida de los Jeronimos 30107 Guadalupe Murcia Spain Department of Urology San Juan University Hospital of Alicante 03010 Calle Pintor Baeza Alicante Spain Universidad de Granada Avenida del Hospicio s/n 18010 Granada Spain Universidad de Navarra Campus Universitario 31080 Pamplona Navarra Spain Universidad Autonoma de Madrid Ciudad Universitaria de cantoblanco 28049 Madrid Spain Servicio de Cirugia HBP y Trasplante Hepatico Complejo Hospitalario Universitario de Badajoz Hospital Infanta Cristina Avenida Elvas s/n 06006 Badajoz Spain Universidad de Cantabria Avenida los Castros s/n 39005 Santander Cantabria Spain Departamento de Cirugia Ciencias Medicas y Sociales Facultad de Medicina y Ciencias de la Salud Universidad de Alcala Campus Cientifico-Tecnologico Plaza de San Diego s/n 28801 Alcala de Henares Madrid Spain Facultad de Medicina Universidad de Malaga 29071 Avenida de Cervantes Malaga Spain Servicio de Urologia (Complejo Hospitalario Universitario de Canarias CHUC) y Departamento de Cirugia (Universidad de La Laguna ULL) Calle Molinos de Agua s/n 38207 San Cristobal de La Laguna Santa Cruz de Tenerife Spain Departamento de Ciencias Biomedicas Basicas Facultad de Ciencias Biomedicas Universidad Europea de

AIM: To analyze the attitude of Spanish medical students toward living liver donation (LLD) and to establish which factors have an influence on this ***: Study type: A sociological, interdisciplinary, multicenter and observational study. Study population: Medical students enrolled in Spain (n = 34000) in the university academic year 2010-2011. Sample size: A sample of 9598 students stratified by geographical area and academic year. Instrument used to measure attitude: A validated questionnaire (PCID-DVH RIOS) was self-administered and completed anonymously. Data collection procedure: Randomly selected medical schools. The questionnaire was applied to each academic year at compulsory sessions. Statistical analysis: Student´s t test, χ2 test and logistic regression ***: The completion rate was 95.7% (n = 9275). 89% (n = 8258) were in favor of related LLD, and 32% (n = 2937) supported unrelated LLD. The following variables were associated with having a more favorable attitude: (1) age (P = 0.008); (2) sex (P < 0.001); (3) academic year (P < 0.001); (4) geographical area (P = 0.013); (5) believing in the possibility of needing a transplant oneself in the future (P < 0.001); (6) attitude toward deceased donation (P < 0.001); (7) attitude toward living kidney donation (P < 0.001); (8) acceptance of a donated liver segment from a family member if one were needed (P < 0.001); (9) having discussed the subject with one’s family (P < 0.001) and friends (P < 0.001); (10) a partner’s opinion about the subject (P < 0.001); (11) carrying out activities of an altruistic nature; and (12) fear of the possible mutilation of the body after donation (P < 0.001).CONCLUSION: Spanish medical students have a favorable attitude toward LLD.

关键词： Attitude Living liver donation Medical students Transplantation Organ donation Psychosocial variables Spain

Low temperature,IBA concentrations and optimal time for adventitious rooting of Eucalyptus benthamii mini-cuttings

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Journal of Forestry Research 2012年第4期23卷 583-592页

作者： Gilvano Ebling Brondani Francisco joséBenedini Baccarin Heron Wilhelmus de Wit Ondas joséLuiz Stape antonio Natal Gonçalves Marcilio de Almeida Department of Forest Engineering Federal University of Mato Grosso(UFMT)Avenida Fernando Corrêa da Costa2367ZC 78060-900CuiabáMato GrossoBrazil. Department of Forest Sciences "Luiz de Queiroz"College of AgricultureUniversity of S o Paulo(ESALQ/USP)Avenida Pádua Dias11POB 9ZC 13418-900PiracicabaSo PauloBrazil. Department of Biological Sciences "Luiz de Queiroz"College of AgricultureUniversity of S o Paulo(ESALQ/USP)Avenida Pádua Dias11POB 9ZC 13418-900PiracicabaSo PauloBrazil. Department of Forest and Environmental Sciences North Carolina State UniversityNC 27695USA.

Eucalyptus benthamii is a forest species of economic interest that has difficulty with seed production and also is considered to have difficulty with adventitious rooting using propagation techniques, such as cutting or mini-cutting. We aimed to assess the adventitious rooting percentage under different storage times in low temperatures and at various IBA （indole-3-butyric acid） concentrations to determine the optimal time of permanence for rooting Eucalyptus benthamii minicuttings in a greenhouse. Shoots collected from mini-stumps cultivated in a semi-hydroponic system were used to obtain the mini-cuttings. For the first experiment, the mini-cuttings were stored at 4℃ for 0 （immediate planting）, 24, 48, 72, 96 and 120 h. The second experiment evaluated the rooting dynamic to determine the optimal time of permanence for minicuttings in a greenhouse. The basal region of the mini-cutting was treated with various IBA solutions： 0 （free of IBA）, 1,000, 2,000, 3,000 and 4,000 mg.L^-1. Every seven days （0 （immediate planting）, 7, 14, 21 and 28 days）, destructive sampling of the mini-cuttings was performed to evaluate the histology of the adventitious rooting. Eucalyptus benthamii minicuttings should be rooted immediately after the collection of the shoots. The 2,000 mg.L^-1 IBA concentration induced a greater speed and percentage of adventitious rooting, and an interval of 35 to 42 days was indicated for permanence of the mini-cuttings in the greenhouse. Expo- sure to low temperature induced adventitious root formation with diffuse vascular connections.

关键词： rhizogenesis plant cloning mini-cutting technique histological analysis indole-3-butyric acid.

Slope Processes, Mass Movement and Soil Erosion： A Review

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Pedosphere 2017年第1期27卷 27-41页

作者： antonio jos Teixeira GUERRA Michael Augustine FULLEN Maria do Carmo Oliveira JORGE joss Fernando Rodrigues BEZERRA Mohamed S. SHOKR Department of Geography Federal University of Rio de Janeiro Rio de Janeiro 21941-972 (Brazil) Faculty of Science and Engineering University of Wolverhampton Wolverhampton WV1 1LY (UK) Department of Geography State University of Maranhao SSo Luis 65055-970 (Brazil) Soil and Water Department Faculty of Agriculture Tanta University Tanta 31527 (Egypt)

Soil erosion and land degradation are global problems and pose major issues in many countries. Both soil erosion and mass movement are two forms of land degradation and humans play important roles in these geomorphological processes. This paper reviews slope processes associated with mass movement and soil erosion and contributory factors, including physical and human agents. Acting together, these cause diverse geomorphological features. Slope processes are illustrated by reference to case studies from Brazil and UK. The causes and impacts of erosion are discussed, along with appropriate remedial bioengineering methods and the potential of the measures to prevent these types of environmental degradation. Although there are several agents of erosion, water is the most important one. Cultivation can promote soil erosion, due to ploughing and harvesting, which moves soil down slopes. Soil erosion and mass movement data would inform the viability of soil conservation practices. Integrated management of drainage basins offers a Dromising way forward for effective soil conservation and soil remedial bioengineering in Brazil and UK.

关键词： geomorphological feature land degradation hazards risks slope processes soil recuperation

Microfacies and Depositional Environments of Miocene Isolated Carbonate Platforms from Central Luconia, Offshore Sarawak, Malaysia

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Acta Geologica Sinica(English Edition) 2017年第5期91卷 1778-1796页

作者： Hammad Tariq JANJUHAH josé antonio GáMEZ VINTANED Ahmed Mohamed Ahmed SALIM Ibrahima FAYE Mumtaz Muhammad SHAH Deva Prasad GHOSH SEACARL Department of Geoscience University Technology PETRONAS Perak Malaysia 32610 Department of Geoscience University Technology PETRONAS Perak Malaysia 32610 Department of Fundamental and Applied Science University Technology PETRONAS Perak Malaysia 32610 Department of Earth Science Quaid-i-Azam UniversityIslamabad Pakistan 45320 CoE in CSIf Department of Geoscience University Technology PETRONAS Perak Malaysia 32610

The Luconia Province-offshore Sarawak-is a key geological unit for understanding the distribution of hydrocarbon resources in Malaysia. Nevertheless, little effort has been made to address the palaeoenvironmental characteristics of the Tertiary carbonates in the key sector of Central *** study the sedimentology and petrography of core samples from a well in Central Luconia, for which thirteen microfacies have been identified reflecting different depositional settings. This is the first microfacies scheme elaborated for Luconian carbonates. Lithofacies and microfacies distribution are compatible with deposition in a reef complex, originating around a framework reef, within the euphotic zone. Sediments were deposited in environments of backreef, reef crest, and forereef. The fair weather wave base is marked by the presence of coralline red algae, foraminifera, decreasing degree of bioclast fragmentation and other microfacies features. As a result, a depositional-environmental model is constructed, depicting a reef complex built around a framework reef developed on the margin of an isolated platform. In addition, an innovative, preliminary time series analysis of facies, microfacies and depositional environment data reveal the existence of seasonal cycles in the stacking patterns of facies and microfacies.

关键词： central Luconia sedimentology microfacies reef complex depositional environments time series