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Segment Anything Is Not Always Perfect: An Investigation of SAM on Different Real-world Applications

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Machine Intelligence Research 2024年第4期21卷 617-630页

作者： Wei Ji jingjing li Qi Bi Tingwei liu Wenbo li li Cheng University of Alberta Edmonton T6G 2R3Canada Wuhan University Wuhan 430072China Dalian University of Technology Dalian 116024China Samsung Research America Mountain View 94043USA

Recently,Meta AI Research approaches a general,promptable segment anything model(SAM)pre-trained on an unprecedentedly large segmentation dataset(SA-1B).Without a doubt,the emergence of SAM will yield significant benefits for a wide array of practical image segmentation *** this study,we conduct a series of intriguing investigations into the performance of SAM across various applications,particularly in the fields of natural images,agriculture,manufacturing,remote sensing and *** analyze and discuss the benefits and limitations of SAM,while also presenting an outlook on its future development in segmentation *** doing so,we aim to give a comprehensive understanding of SAM's practical *** work is expected to provide insights that facilitate future research activities toward generic *** code is publicly available at https://***/liuTingWed/SAM-Not-Perfect.

关键词： Segment anything model(SAM) visual perception segmentation foundational model computer vision.

VLBI with SKA: Possible Arrays and Astrometric Science

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Research in Astronomy and Astrophysics 2024年第7期24卷 4-36页

作者： Yingjie li Ye Xu jingjing li Shuaibo Bian Zehao lin Chaojie Hao Dejian liu Purple Mountain Observatory Chinese Academy of Sciences University of Science and Technology of China

The next generation of very long baseline interferometry(VLBI) is stepping into the era of microarcsecond(μas)astronomy, and pushing astronomy, especially astrometry, to new heights. VLBI with the Square Kilometre Array(SKA), SKA-VLBI, will increase current sensitivity by an order of magnitude, and reach astrometric precision routinely below 10 μas, even challenging 1 μas. This advancement allows precise parallax and proper motion measurements of various celestial objects. Such improvements can be used to study objects(including isolated objects, and binary or multiple systems) in different stellar stages(such as star formation, main-sequence stars,asymptotic giant branch stars, pulsars, black holes, white dwarfs, etc.), unveil the structure and evolution of complex systems(such as the Milky Way), benchmark the international celestial reference frame, and reveal cosmic expansion. Furthermore, the theory of general relativity can also be tested with SKA-VLBI using precise measurements of light deflection under the gravitational fields of different solar system objects and the perihelion precession of solar system objects.

关键词： astrometry galaxies: kinematics and dynamics Galaxy: kinematics and dynamics gravitation ISM: kinematics and dynamics parallaxes stars: kinematics and dynamics

Occurrence of viable but non-culturable(VBNC)pathogenic bacteria in tap water of public places

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Frontiers of Environmental Science & Engineering 2024年第3期18卷 115-129页

作者： lizheng Guo Xinyan Xiao Kassim Chabi Yiting Zhang jingjing li Su Yao Xin Yu China National Research Institute of Food and Fermentation Industries Co. Ltd.China Center of Industrial Culture CollectionBeijing 100015China Key Laboratory of Urban Environment and Health Institute of Urban EnvironmentChinese Academy of SciencesXiamen 361021China College of Environment&Ecology Xiamen UniversityXiamen 361102China

Viable but non-culturable(VBNC)bacteria have been detected in source water and effluent of drinking water treatment processes,leading to significant underestimation of viable cell *** information exists on VBNC bacteria in tap water,particularly in public *** address this gap,a comprehensive nine-month study was conducted in a major city in south-eastern China,using culture-based and quantitative PCR with propidium monoazide(PMA)dye ***-five samples were collected from five representative public places(railway station,campus,hospital,shopping mall,and institution).The findings revealed that culturable bacteria represented only 0–17.51%of the viable 16S rRNA genes,suggesting that the majority of viable bacteria existed in an uncultured or VBNC ***,opportunistic pathogens such as Escherichia coli,Enterococcus faecalis,Pseudomonas aeruginosa,Salmonella sp.,and Shigella *** primarily detected as VBNC cells,with concentrations ranging from 1.03×10^(0)to 3.01×10^(3),1.20×10^(0)to 1.42×10^(2),1.32×10^(0)to 8.82×10^(0),1.00×10^(0)to 6.71×10^(1),and 2.07×10^(0)to 1.93×10^(2)cell equivalent/100 mL,*** *** was observed in tap water after prolonged stagnation,indicating potential risks associated with bacterial *** and temporal factors accounted for 17.1%and 26.0%,respectively,of the variation in tap water community structure during the sampling period,as revealed by 16S rRNA amplicon *** study provides quantitative insights into the occurrence of VBNC bacteria in tap water and highlights the need for more sensitive monitoring methods and microbial control techniques to enhance tap water safety in public locations.

关键词： VBNC Pathogenic bacteria PMA treatment Public tap water Community structure

Spatiotemporal mapping of(ultra‐)mafic magmatic mine areas:Implications of economic and political realities in China

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Deep Underground Science and Engineering 2024年第1期3卷 91-102页

作者： Heling li liang Tang Tim T.Werner Zhengmeng Hou Fan Meng jingjing li College of Earth Sciences Chengdu University of TechnologyChengduChina Institute of Subsurface Energy Systems Clausthal University of TechnologyClausthal ZellerfeldGermany School of Geography Earth and Atmospheric SciencesFaculty of ScienceThe University of MelbourneMelbourneVictoriaAustralia

The spatiotemporal extension/expansion of mine areas is affected by multiple *** far,very little has been done to examine the interaction between mine areas and political or economic ***(ultra‐)mafic magmatic mines in China played a specific role in supporting national development and providing an ideal research subject for monitoring their *** this study,remote sensing and mining‐related GIS data were used to identify and analyze 1233(ultra‐)mafic magmatic mine area polygons in China,which covered approximately 322.96 km2 of land and included a V–Ti–Fe mine,a copper–nickel mine,a chromite mine,an asbestos mine,and a diamond *** was found that(1)the areal expansion of mines is significantly related to the mine types,perimeter,topography,and population density.(2)The mine area variation also reflects market and policy *** temporal expansion of the mine area from 2010 to 2020 followed an S‐shaped pattern(with the turning point occurring in 2014),closely related to iron overcapacity and tightened mining policies.(3)The complexity(D)of the mine area may reflect mine design and excavation *** be specific,lower D indicates early‐stage or artisanal/small‐scale mining,whereas higher D represents large‐scale *** study demonstrates that the detailed mapping of mine land can serve as an indicator to implement miningrelated market and policy ***(ultra‐)mafic mines area data set can be accessed at https://***/record/7636616#.Y-p0uXaZOa0.

关键词： complexity mine area mining and socioeconomic interaction spatiotemporal distribution (ultra‐)mafic magmatic mine

Insights into the dwarfing mechanism of pear(Pyrus betulaefolia) based on anatomical and structural analysis using X-ray scanning

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Horticultural Plant Journal 2024年第2期10卷 355-366页

作者： lili Dong Chuxuan Yang Jing Wang jingjing li Mei Zhao Dingli li Zhiyun Qiu Chunhui Ma Zhenhua Cui College of Horticulture Qingdao Agricultural UniversityQingdaoShandong 266109China College of Landscape and Forestry Qingdao Agricultural UniversityQingdaoShandong 266109China

The lack of a suitable rootstock to control scion growth has limited the development of high-density plantations in pear production, which is partly attributed to poor understanding of the dwarfing mechanism. In the present study, the rootstock of the dwarf-type pear (Pyrus betulaefolia)PY-9’ was identified and used as the material for anatomical ***-9’ grew to half the tree height of the normal cultivar Zhengdu’, along with fewer internodes and shorter length. Significant differences in growth rate betweenPY-9’ andZhengdu’ were detected at approximately 30 days after full bloom, which corresponded with the time of the greatest difference in water potential between the dwarf and normal ***-9’ showed a higher photosynthetic rate thanZhengdu’. Anatomical analysis showed thatPY-9’ had higher area ratios of both phloem and xylem and more developed vascular tissues thanZhengdu’. The three-dimensional reconstructed skeleton of the xylem from X-ray computed tomography scanning revealed greater intervessel connectivity inZhengdu’ than inPY-9’, which could contribute to the more vigorous growth ofZhengdu’. This study thus provides the first comparison of the microstructural properties of xylem elements between a dwarfing-type and vigorous-type pear rootstock, providing new insights into the dwarfing mechanism in pear and facilitating breeding of dwarf pear rootstocks to increase crop productivity.

关键词： Pyrus betulaefolia Anatomical analysis Dwarfing mechanism Intervessel connectivity Rootstock

3D interlocked all-textile structured triboelectric pressure sensor for accurately measuring epidermal pulse waves in amphibious environments

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Nano Research 2024年第3期17卷 1923-1932页

作者： Shaobo Si Chenchen Sun Yufen Wu jingjing li Han Wang Yinggang lin Jin Yang Zhong lin Wang Department of Optoelectronic Engineering Key Laboratory of Optoelectronic Technology and Systems Ministry of EducationChongqing UniversityChongqing 400044China College of Physics and Electronic Engineering Chongqing Normal UniversityChongqing 401331China Beijing Institute of Nanoenergy and Nanosystems Chinese Academy of SciencesBeijing 100083China School of Materials Science and Engineering Georgia Institute of TechnologyAtlantaGA 30332USA

The performance degradation and even damage of the e-textiles caused by sweat,water,or submersion during all-weather health monitoring are the main reasons that e-textiles have not been commercialized and routinized so ***,we developed an amphibious,high-performance,air-permeable,and comfortable all-textile triboelectric sensor for continuous and precise measurement of epidermal pulse waves during full-day *** on the principle of preparing gas by acid-base neutralization reaction,a one-piece preparation process of amphibious conductive yarn(ACY)with densely porous structures is *** innovative three-dimensional(3D)interlocking fabric knitted from ACYs(0.6 mm in diameter)and polytetrafluoroethylene yarns exhibit high sensitivity(0.433 V·kPa^(-1)),wide bandwidth(up to 10 Hz),and stability(>30,000 cycles).With these benefits,98.8%agreement was achieved between wrist pulse waves acquired by the sensor and a high-precision laser ***,the polytetrafluoroethylene yarn with good compression resilience provides sufficient mechanical support for the contact separation of the ***,the unique skeletonized design of the 3D interlocking structure can effectively relieve the water pressure on the sensor surface to obtain stable and accurate pulse waves(underwater depth of 5 cm).This achievement represents an important step in improving the practicality of e-textiles and early diagnosis of cardiovascular diseases.

关键词： triboelectric pressure sensor amphibious fabric interlocking fabric pulse wave measurement one-piece preparation method

Structural characterization and prebiotic potential of polysaccharides from Polygonatum sibiricum

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Food Science and Human Wellness 2024年第4期13卷 2208-2220页

作者： Zihan Qi Tiexiang Gao jingjing li Shuhan Zhou Zhigang Zhang Mingzhu Yin Haiming Hu Hongtao liu College of Basic Medical Sciences Hubei University of Chinese MedicineWuhan 430065China College of Pharmacy Hubei University of Chinese MedicineWuhan 430065China

Polygonatum sibiricum has been widely used due to its excellent biological *** prepared a novel polysaccharide from ***(PSP)in this *** a monosaccharide composition analysis,PSP was mainly composed of fructose and glucose with a molar percentage of 93.81:*** main linkage types were identified asα-D-Glcp-1→and→2-β-D-Fruf-1→.The molecular weight of PSP showed no significant change after simulated salivary and gastrointestinal ***,PSP could be broken down by intestinal *** findings revealed that PSP administration increased the abundance of probiotics such as ***,the results showed that gut microbes could utilize PSP to produce short-chain fatty acids including acetic acid,propionic acid,and butyric ***,the PSP fermentation broth displayed an excellent scavenging effect on free radicals,including 2,2-diphenyl-1-picrylhydrazyl radical,superoxide radical,and hydroxyl *** summary,this study will help to promote the application of PSP as prebiotics in functional food and the medical industry.

关键词： Dietary polysaccharides Prebiotic Gut microbiota Short-chain fatty acids

The evolution and diurnal expression patterns of photosynthetic pathway genes of the invasive alien weed,Mikania micrantha

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Journal of Integrative Agriculture 2024年第2期23卷 590-604页

作者： Kangkang Wang Mengjiao Jin jingjing li Yesong Ren Zaiyuan li Xinghai Ren Cong Huang Fanghao Wan Wanqiang Qian Bo liu Shenzhen Branch Guangdong Laboratory of Lingnan Modern Agriculture/Genome Analysis Laboratory of the Ministry of Agriculture and Rural AffairsAgricultural Genomics Institute at ShenzhenChinese Academy of Agricultural SciencesShenzhen 518120China State Key Laboratory of Crop Stress Adaptation and Improvement School of Life SciencesHenan UniversityKaifeng 475004China Shenzhen Research Institute of Henan University Shenzhen 518000China

Mikania micrantha is a fast-growing global invasive weed species that causes severe damage to natural ecosystems and very large economic losses of forest and crop *** has advantages in photosynthesis,including a similar net photosynthetic rate as C4 plants and a higher carbon fixation *** used a combination of genomics and transcriptomics approaches to study the evolutionary mechanisms and circadian expression patterns of *** ***,16 positive selection genes focused on photoreaction and utilization of *** different tissues,98.1%of the genes associated with photoresponse had high expression in stems,and more than half of the genes of the C4 cycle had higher expression in stems than in *** stomatal opening and closing,2 genes of carbonic anhydrase(CAs)had higher expression at 18:00 than at 8:00,and the slow anion channel 1(SLAC1)and high-leaf-temperature 1 kinase(HT1)genes were expressed at low levels at 18:*** addition,genes associated with photosynthesis had higher expression levels at 7:00 and 17:*** hypothesized that *** may undergo photosynthesis in the stem and flower organs and that some stomata of the leaves were opening at night by CO_(2)*** addition,its evolution may attenuate photoinhibition at high light intensities,and enhance more efficient of photosynthesis during low light *** the tissue-specific photosynthetic types and different diurnal pattern of photosynthetic-related genes may contribute to its rapid colonization of new habitats of ***.

关键词： invasion plant Mikania micrantha photosynthesis stomata stem

RNA sequencing of exosomes secreted by fibroblast and Schwann cells elucidates mechanisms underlying peripheral nerve regeneration

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Neural Regeneration Research 2024年第8期19卷 1812-1821页

作者： Xinyang Zhou Yehua Lv Huimin Xie Yan li Chang liu Mengru Zheng Ronghua Wu Songlin Zhou Xiaosong Gu jingjing li Daguo Mi Suzhou Medical College of Soochow University SuzhouJiangsu ProvinceChina Key Laboratory of Neuroregeneration of Jiangsu and Ministry of Education Co-Innovation Center of NeuroregenerationNantong UniversityNantongJiangsu ProvinceChina Department of Orthopedic Nantong Traditional Chinese Medicine HospitalNantongJiangsu ProvinceChina Nantong Stomatological Hospital Affiliated to Nantong University NantongJiangsu ProvinceChina Department of General Practice Affiliated Hospital of Nantong UniversityNantongJiangsu ProvinceChina

Exosomes exhibit complex biological functions and mediate a variety of biological processes,such as promoting axonal regeneration and functional recove ry after *** non-coding RNAs(IncRNAs)have been reported to play a crucial role in axonal *** r,the role of the IncRNA-microRNAmessenger RNA(mRNA)-competitive endogenous RNA(ceRNA)network in exosome-mediated axonal regeneration remains *** this study,we performed RNA transcriptome sequencing analysis to assess mRNA expression patterns in exosomes produced by cultured fibroblasts(FC-EXOs)and Schwann cells(SCEXOs).Diffe rential gene expression analysis,Gene Ontology analysis,Kyoto Encyclopedia of Genes and Genomes analysis,and protein-protein intera ction network analysis were used to explo re the functions and related pathways of RNAs isolated from FC-EXOs and *** found that the ribosome-related central gene Rps5 was enriched in FC-EXOs and SC-EXOs,which suggests that it may promote axonal *** addition,using the miRWalk and Starbase prediction databases,we constructed a regulatory network of ceRNAs targeting Rps5,including 27 microRNAs and five *** ceRNA regulatory network,which included Ftx and Miat,revealed that exsosome-derived Rps5 inhibits scar formation and promotes axonal regeneration and functional recovery after nerve *** findings suggest that exosomes derived from fibro blast and Schwann cells could be used to treat injuries of peripheral nervous system.

关键词： ceRNA network exosomes fibroblast cells Gene Ontology(GO) Kyoto Encyclopedia of Genes and Genomes(KEGG) protein-protein interaction(PPI)networks RNA-seq Schwann cells