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New host and geographic records of five pleosporalean hyphomycetes associated with Musa spp.(Banana)

Studies in Fungi 2021年第1期6卷 92-115页

作者： Samarakoon BC phookamsak R Karunarathna SC Jeewon R Chomnunti P Xu JC Li YJ The State phosphorus Resource Development and Utilization Engineering Technology Research Centre Yunnan Phosphate Chemical Group Co.LtdKunming 650201China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand CAS Key Laboratory for plant Biodiversity and Biogeography of East Asia(KLpB) Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina East and Central Asia Regional Office World Agroforestry Centre(ICRAF)Kunming 650201YunnanChina Centre for Mountain Futures(CMF) Kunming Institute of BotanyKunming 650201YunnanChina Honghe Center for Mountain Futures Kunming Institute of BotanyChinese Academy of SciencesHonghe County 654400YunnanPeople’s Republic of China Department of Health Sciences Faculty of Medicine and Health SciencesUniversity of MauritiusReduitMauritius Research Center of Microbial Diversity and Sustainable Utilization Faculty of SciencesChiang Mai UniversityChiang Mai 50200Thailand

A study was undertaken to collect and identify saprobic fungi associated with Musa spp.(banana)from Taiwan(China),and Thailand.Samples were collected during the dry season and their morpho-molecular relationships were investigated.Five brown pleosporalean hyphomycetous taxa in periconiaceae and Torulaceae viz.periconia cortaderiae,p.delonicis,Torula chromolaenae,T.fici,and T.masonii were identified for the first time from Musa spp.(Musaceae).phylogenetic analyses of a combined SSU,LSU,ITS,RpB2 and TEF DNA sequence dataset further justified the taxonomic placements of these five taxa in the above mentioned families.periconia delonicis is reported for the first time on a monocotyledonous host and T.masonii is the first geographical record from Taiwan(China).

关键词： Dothideomycetes periconia pleosporales taxonomy Torula

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Taxonomic monograph of epifoliar fungi

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Fungal Diversity 2023年第4期121卷 139-334页

作者： D.S.Marasinghe S.Hongsanan X.Y.Zeng E.B.G.Jones p.chomnunti S.Boonmee K.D.Hyde Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Innovative Institute for plant Health Zhongkai University of Agriculture and EngineeringGuangzhou 510225People’s Republic of China Faculty of Sciences Research Center of Microbial Diversity and Sustainable UtilizationChiang Mai UniversityChiang Mai 50200Thailand Department of plant pathology College of AgricultureGuizhou UniversityGuiyang 550025China Nantgaredig 33B St.Edwards RoadSouthsea PO53DHHantsUK Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O Box 2455Riyadh 11451Kingdom of Saudi Arabia Shenzhen Key Laboratory of Microbial Genetic Engineering College of Life Sciences and OceanographyShenzhen UniversityShenzhen 518060GuangdongPeople’s Republic of China

Epifoliar fungi are one of the significant fungal groups typically living on the surface of leaves. They are usually recordedas saprobes, obligate parasites and commensals and are widely distributed in tropical and subtropical regions. Numerousgenera within this group remain inadequately understood, primarily attributed to limited taxonomic knowledge and insufficientmolecular data. Furthermore, the taxonomic delineation of epifoliar fungi remained uncertain, with scattered andliterature-based data often intermixed with other follicolous fungi. Herein, a comprehensive taxonomic monograph of 124genera in (32) Asterinales, (18) Capnodiales, (15) Chaetothyriales, (8) Meliolales, (8) Micropeltidales, (10) Microthyriales,(32) parmulariales and (1) Zeloasperisporiales was provided re-describing with illustrations and line drawings. Notes onecological and economic importance of the families are also provided. Representatives type herbarium materials of Campoapulcherrima, Cycloschizon brachylaenae, Ferrarisia philippina, Hysterostomella guaranitica, palawaniella orbiculata andpseudolembosia orbicularis of parmulariaceae were re-examined and provided updated illustrations with descriptions. Abackbone phylogenetic tree and divergence estimation analysis for epifoliar fungi based on LSU and 5.8s ITS sequence dataare provided.

关键词： Divergence Follicolous Obligate parmulariaceae Tropical

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Multi-gene phylogeny of Jattaea bruguierae,a novel asexual morph from Bruguiera cylindrica

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Studies in Fungi 2017年第1期2卷 235-245页

作者： Dayarathne MC Abeywickrama p Jones EBG Bhat DJ Chomnunti P Hyde KD Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai57100Thailand Institute of plant and Environment protection Beijing Academy of Agriculture and Forestry Sciences Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha 403108India Formerly Department of BotanyGoa UniversityGoa 403206India

During our survey on marine-based ascomycetes of southern Thailand,fallen mangrove twigs were collected from the intertidal zones.Those specimens yielded a novel asexual morph of Jattaea(Calosphaeriaceae,Calosphaeriales),Jattaea bruguierae,which is confirmed as a new species by morphological characteristics such as nature and measurements of conidia and conidiophores,as well as a multigene analysis based on combined LSU,SSU,ITS andβ-tubulin sequence data.Jattaea species are abundantly found from wood in terrestrial environments,while the asexual morphs are mostly reported from axenic cultures.Jattaea bruguierae is the first documentation of an asexual morph species from marine-habitats.

关键词： marine fungi morphology phylogeny taxonomy

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Fungal plant relationships by direct sequencing in Foliar epiphytes

Fungal plant relationships by direct sequencing in Foliar ep...

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中国菌物学会2015年学术年会

作者： Xiangyu Zeng Tingchi Wen putarak chomnunti Saranyaphat Boonmee Kevin D.Hyde The Engineering and Research Center of Southwest Bio-pharmaceutical Resource Ministry of EducationGuizhou University Centre of Excellence in Fungal Research Mae Fah Luang University School of Science Mae Fah Luang University Key Laboratory for plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of Sciences

Foliar epiphytes are a polyphyletic group mostly found on the surface of leaves with worldwide distribution. Many species of foliar epiphytes are obligate parasites which can reduce yield and quality of crops by absorbing plant nutrients, while some species indirectly affect plants by covering the host surface and thus reducing photosynthesis. The classification and phylogeny of foliar epiphytes are presently poorly known worldwide, for most of foliar epiphyte species are obligate parasites and are difficult or normally could not be cultured. In the meanwhile, directly sequence from mycelium or ascomata also have a problem with contamination and other problems. So far, we have introduced 3 new taxa, which are Ceramothyrium longivolcaniforme sp. nov., Irenopsis walsurae sp. nov. and Lembosia xyliae sp. nov.. And provided new sequences of Meliola clerodendricola, Meliola tamarindi and one Asterina species. The main objective of this study is to figure out the phylogeny and evolutionary relationships of foliar epiphytes by direct sequencing and further to gain knowledge of fungi–plant relationships.

关键词： Epifoliar parasite phylogeny

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The sooty moulds

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Fungal Diversity 2014年第3期66卷 1-36页

作者： putarak chomnunti Sinang Hongsanan Begoña Aguirre-Hudson Qing Tian Derek peršoh Manpreet K.Dhami Aisyah S.Alias Jianchu Xu Xingzhong Liu Marc Stadler Kevin D.Hyde Key Laboratory for plant Biodiversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina Institute of Excellence in Fungal Research and School of ScienceMae Fah Luang University333 M.1 ThasudMuangChiang Rai 57100Thailand Jodrell Laboratory Royal Botanic GardensKew RichmondSurrey TW93DSUK Department of Mycology University of BayreuthUniversitätsstraße 3095440 BayreuthGermany plant Health and Environment Laboratory Ministry for Primary IndustriesP O Box 2095Auckland 1140New Zealand Institute of Ocean and Earth Sciences(IOES) C308Institute of Postgraduate Studies BuildingUniversity of Malaya50603 Kuala LumpurMalaysia State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesNo3 Park 1Chaoyang DistrictBeijing 100101People’s Republic of China Department Microbial Drugs Helmholtz-Centre for Infection Research and Technical University of BraunschweigInhoffenstrasse 738124 BraunschweigGermany World Agroforestry Center East and Central AsiaKunming 650201YunnanChin

Sooty moulds are a remarkable,but poorly understood group of fungi.They coat fruits and leaves superficially with black mycelia,which reduces photosynthesis rates of host plants.Few researchers have,however,tried to quantify their economic importance.Sooty moulds have been well-studied at the morphological level,but they are poorly represented in a natural classification based on phylogeny.Representatives are presently known in Antennulariellaceae,Capnodiaceae,Chaetothyriaceae,Coccodiniaceae,Euantennariaceae,Metacapnodiaceae and Trichomeriaceae and several miscellaneous genera.However,molecular data is available for only five families.Most sooty mould colonies comprise numerous species and thus it is hard to confirm relationships between genera or sexual and asexual states.Future studies need to obtain single spore isolates of species to test their phylogenetic affinities and linkages between morphs.Next generation sequencing has shown sooty mould colonies to contain many more fungal species than expected,but it is not clear which species are dominant or active in the communities.They are more common in tropical,subtropical and warm temperate regions and thus their prevalence in temperate regions is likely to increase with global warming.Sooty moulds are rarely parasitized by fungicolous taxa and these may have biocontrol potential.They apparently grow in extreme environments and may be xerophilic.This needs testing as xerophilic taxa may be of interest for industrial applications.Sooty moulds grow on sugars and appear to out-compete typical“weed”fungi and bacteria.They may produce antibiotics for this purpose and their biochemical potential for obtaining novel bioactive compounds for medical application is underexplored.

关键词： Antibiotics Capnodiales Chaetothyriales Global warming Life cycle phylogeny Xerophiles

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Trichomeriaceae, a new sooty mould family of Chaetothyriales

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Fungal Diversity 2012年第5期56卷 63-76页

作者： putarak chomnunti D.J.Bhat E.B.Gareth Jones Ekachai Chukeatirote Ali H.Bahkali Kevin D.Hyde International Fungal Research and Development Centre The Research Institute of Resource InsectsChinese Academy of ForestryBailongsiKunmingYunnanPeople’s Republic of China 650224 Institute of Excellence in Fungal Research School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute of Ocean and Earth Sciences(IOES) C308Institute of Postgraduate Studies BuildingUniversity of Malaya50603Kuala LumpurMalaysia College of Science Botany and Microbiology DepartmentKing Saud UniversityRiyadh 1145Saudi Arabia

Trichomerium is a genus of foliar epiphytes with the appearance of sooty moulds,mostly occurring on the surface of living leaves and apparently gaining their nutrients from insect exudates.Species have ascostromata with setae and develop on a loosely interwoven mycelial mass of dark brown hyphae,while asci have a bitunicate appearance with hyaline ascospores.In this study,we made 16 collections of Trichomerium from Thailand.All were isolated,and the LSU and ITS rDNA gene regions sequenced.phylogenetic analysis indicated that the Trichomerium species form a monophyletic clade within Chaetothyriales and warrant the introduction of a new family Trichomeriaceae.Bootstrap support for the Chaetothyriales is 100%and clearly separates Trichomeriaceae from Capnodiales which are morphologically very similar.A detailed account of Trichomerium is provided and we describe and illustrate three new species based on morphological and molecular data.We propose that T.foliicola is adopted as the generic type of Trichomerium because it has been impossible to obtain the holotype specimen of T.coffeicola and also no molecular data exists in worldwide databases for this species or genus.

关键词： Foliar epiphytes phylogeny Sooty moulds Trichomerium

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Taxonomy and the evolutionary history of Micropeltidaceae

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Fungal Diversity 2019年第4期97卷 393-436页

作者： Xiang-Yu Zeng Hai-Xia Wu Sinang Hongsanan Rajesh Jeewon Ting-Chi Wen Sajeewa S.N.Maharachchikumbura putarak chomnunti Kevin D.Hyde International Fungal Research and Development Centre Key Laboratory of Resource Insect Cultivation&Utilization State Forestry AdministrationThe Research Institute of Resource InsectsChinese Academy of ForestryKunming 650224China The Engineering Research Center of the Utilization for Characteristic Bio-pharmaceutical Resources in Southwest Guizhou UniversityGuiyang 550025China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Shenzhen Key Laboratory of Microbial Genetic Engineering College of Life Sciences and OceanographyShenzhen UniversityShenzhen 518000China Shenzhen Key Laboratory of Laser Engineering College of Optoelectronic EngineeringShenzhen UniversityShenzhen 518000China Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduit 80837Mauritius Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniverstyPO Box 8123 Al KhoudOman School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Key Laboratory for plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of Sciences132 Lanhei RoadKunming 650201Chin

Micropeltidaceae species are flyspeck fungi which have been subjected to few systematic studies.We re-examined 27 genera which were accepted in the Micropeltidaceae and re-described them based on herbaria materials and protologues.Based on morphology and phylogenetic investigations,we transfer Micropeltidaceae to a new order,Micropeltidales(Lecanoromycetes).Genera with bluish or greenish upper walls(Dictyopeltella,Dictyothyriella,Dictyothyrina,Dictyothyrium,Haplopeltheca,Micropeltis,Scolecopeltidium and Stomiopeltopsis)are accepted in the new taxonomic concept for Micropeltidaceae.A molecular clock approach estimated the divergence time of the Micropeltidaceae crown group at 130(165–104)Mya,which also supports its rank as an order(diverging from 220–100 Mya).The evolutionary histories between Micropeltidaceae species and host plants are interpreted by cophylogenetic analyses calibrated by their divergence times.The result indicates that the diversification of Angiospermae(130–80 Mya)fosters the formation of genera of Micropeltidaceae mainly via cospeciation events,and this codivergent period would be an important reference when establishing generic boundaries of epifoliar fungi.

关键词： Codivergence Cophylogeny Dating Lecanoromycetes Micropeltidales

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Meliolales

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Fungal Diversity 2015年第5期74卷 91-141页

作者： Sinang Hongsanan Qing Tian Derek peršoh Xiang-Yu Zeng Kevin D.Hyde putarak chomnunti Saranyaphat Boonmee Ali H.Bahkali Ting-Chi Wen Key Laboratory for plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Institute of Excellence in Fungal Research Chiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Ruhr-Universität Bochum GeobotanyUniversitätsstraße 15044780 BochumGermany Botany and Microbiology Department College of ScienceKing Saud UniversityRiyadhKSA 11442Saudi Arabia The Engineering and Research Center of Southwest Bio-pharmaceutical Resource Ministry of EducationGuizhou UniversityGuiyang 550025China

The order Meliolales comprises the families Armatellaceae and Meliolaceae.These are black mildews that grow on the surface of host plants,often regarded as minor plant pathogens.In this study,types or specimens of 17 genera of Armatellaceae and Meliolaceae were borrowed from herbaria and re-examined.Armatella is accepted in Armatellaceae and Amazonia,Appendiculella,Asteridiella,Cryptomeliola,Endomeliola,Irenopsis and Meliola are accepted in the family Meliolaceae.Laeviomeliola is synonymized under Meliola.Ceratospermopsis,Ectendomeliola,Haraea,Hypasteridium,Leptascospora,Metasteridium,Ophiociliomyces,Ophioirenina,Ophiomeliola,parasteridium,pauahia,pleomeliola,pleomerium,prataprajella,Ticomyces,Urupe and Xenostigme are excluded from Meliolaceae,and are treated as doubtful genera or placed in ascomycetes genera incertae sedis.The type species of each genus is re-described and illustrated with photomicrographs.Notes are provided and comparisons made.Two new species of Meliola and one new species of Irenopsis are also introduced with molecular data and we provide the most populated phylogenetic tree of Meliolomycetidae to date.Meliola thailandicum was found on Dimocarpus longan(Sapindales)and Acacia auriculiformis(Fabales)and confirmed to be the same species in the molecular analyses.This has important implications as the several hundred Meliola species are recognized based on host associations.Thus the same species being recorded from two unrelated hosts sheds doubt on Meliola species being host-specific.

关键词： Armatella Armatellaceae Ascomycota Black mildews Meliola Meliolaceae Meliolomycetidae Sordariomycetes Morphology Type Species Taxonomy

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phylogenetic relationships and morphological reappraisal of Melanommataceae(pleosporales)

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Fungal Diversity 2015年第5期74卷 267-324页

作者： Qing Tian Jian Kui Liu Kevin D.Hyde Dhanushka N.Wanasinghe Saranyaphat Boonmee Subashini C.Jayasiri Zong Long Luo Joanne E.Taylor Alan J.L.phillips Darbhe J.Bhat Wen Jing Li Hiran Ariyawansa Kasun M.Thambugala EBGareth Jones putarak chomnunti Ali H.Bahkali Jian Chu Xu Erio Camporesi Key Laboratory for plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Center for Mountain Ecosystem Studies Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Royal Botanic Garden Edinburgh 20A Inverleith RowEdinburgh EH35LRUK UCIBIO Faculdade de Ciências e TecnologiaUniversidade Nova de Lisboa2829-516 CaparicaPortugal Formerly Department of BotanyGoa UniversityGoa-403206India Res:No.128/1–J Azad Housing SocietyCurcaP.O.Goa Velha-403108India Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia A.M.B.Gruppo Micologico Forlivese BAntonio Cicognani Via Roma 18ForlìItaly A.M.B.Circolo Micologico BGiovanni Carini C.P.314 BresciaItaly Societàper gli Studi Naturalistici della Romagna C.P.144 BagnacavalloRAItaly

The family Melanommataceae is widespread in temperate and subtropical regions and species invariably occur on twigs or bark of various woody plants in terrestrial,marine or freshwater habitats.In this paper,the type species of 26 genera of the family are re-described and illustrated.A multi-gene phylogeny based on maximum likelihood and Bayesian analyses of LSU,SSU,RpB2 and EF-1αsequence data of species of Melanommataceae is provided.The new genera,Muriformistrickeria,pseudostrickeria and Thysanolaenae are introduced.Anomalemma is synonymized under Exosporiella.Acrocordiopsis,Astrosphaeriella,Beverwykella,Caryosporella,Sporidesmiella and pseudotrichia are excluded from Melanommataceae based on molecular phylogenetic analyses.presently,20 genera are accepted in Melanommataceae.Based on the phylogenetic data,five new species,Byssosphaeria siamensis,Herpotrichia vaginatispora,pseudostrickeria muriformis,pseudostrickeria ononidis and Muriformistrickeria rubi,are introduced.

关键词： Byssosphaeria Herpotrichia Multi-gene phylogeny Muriformistrickeria New species pseudostrickeria Taxonomy Thysanolaenae Type

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Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology

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Fungal Diversity 2018年第6期93卷 241-443页

作者： Indunil C.Senanayake Rajesh Jeewon putarak chomnunti Dhanushka N.Wanasinghe Chada Norphanphoun Anuruddha Karunarathna Dhandevi pem Rekhani H.perera Erio Camporesi Eric H.C.McKenzie Kevin D.Hyde Samantha C.Karunarathna Key Laboratory for plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina World Agroforestry Centre East and Central AsiaKunming 650201YunnanChina Centre of Excellence for Fungal Research Mae Fah Luang UniversityChiang RaiThailand Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduit 80837Mauritius Department of Entomology and plant pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand A.M.B.Gruppo Micologico Forlivese Antonio CicognaniVia Roma 18Forlı`Italy A.M.B.Circolo Micologico Giovanni Carini314 BresciaItaly Societa`per gliStudiNaturalisticidella Romagna 144 BagnacavalloRAItaly Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand

Demarcation of family,genus and species boundaries in the Diaporthales has been tentative due to uninformative illus-trations and descriptions,overlapping morphological characteristics,misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures.In this study,we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria.We examined,described and illustrated them.This study is based on morphological characters from type or authentic specimens,details from protologue and original illustrations and molecular data obtained from GenBank.Combined analyses of nrITS,nrLSU,RpB2 and TEF1-a sequence data were used to construct the molecular phylogeny.Additionally,we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers.Based on morphology and phylogeny,we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families.For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families.We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis.Tirisporellaceae,which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology.A new combi-nation,Dendrostoma leiphaemia propose for Amphiporthe leiphaemia(Fr.)Butin.Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales,24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis.We provide notes for genera in Diaporthales genera incertae sedis,and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny.

关键词： Authentic specimens Dendrostoma leiphaemia Incertae sedis Classification Taxonomy Families Accepted genera

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