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DNA Methyltransferases Directed Anti-Cancerous Plant Medicine (Xanthomicrol and Galloyl) Based Molecular Docking and Dynamics Simulation

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Computational Molecular Bioscience 2015年第2期5卷 13-19页

作者： Ehsan Heidari Soureshjani ali kazemi babaheydari Elahe Saberi Young Researcher and Elites Club Islamic Azad University Shahrekord Branch Shahrekord Iran Faculty of Science Department of Chemistry Islamic Azad University Shahrekord Branch Shahrekord Iran Faculty of Basic Sciences Department of Biology Shahrekord Branch Islamic Azad University Sahrekord Iran

DNA methyltransferases 1 (DNMT1) has been looked as crucial targets against various types of cancers. MD simulations have advanced to a point where the atomic level information of biological macromolecule (protein or DNA-protein or protein-protein) can easily be advantageous to predict the functionality. In this study we utilize xanthomicrol and galloyl compounds to investigate potential compounds for the inhibition of DNMT1, and the results of these two compounds are compared with drug decitabine. Xanthomicrol and galloyl are found to dock successfully within the active site of DNMT1. A comparison of the inhibitory potential of screened xanthomicrol inhibited DNMT1 approximately is identical with those of their corresponding drugs, decitabine. The stability of the DNMT1 with the best docked xanthomicrol, were further analysed in molecular dynamics (MD) simulation and compared with those of the respective drugs namely decitabine which revealed stabilization of these complexes within 300 ns of simulation with better stability of DNMT1.

关键词： DNA Methyltransferases 1 Decitabine Molecular Dynamics Galloyl Xanthomicrol

Mineral Chemistry,Trace Elements,Isotopic Analysis and Zircon U-Pb Dating in the Hesar Pluton,Northern UDMA,Iran:Implications for Pre-Collisional Magma Mixing

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Acta Geologica Sinica(English Edition) 2024年第3期98卷 657-678页

作者： Kazem kazemi Soroush MODABBERI Parisa GHARIBNEJAD XIAO Yilin Fatemeh SARJOUGHIAN ali KANANIAN School of Geology College of ScienceUniversity of TehranTehranIran Research Centre for Mineral Resources Xinjiang Institute of Ecology and GeographyChinese Academy of SciencesUrumqi 830011China National Key Laboratory of Ecological Security and Resource Utilization in Arid Areas Xinjiang Institute of Ecology and GeographyChinese Academy of SciencesUrumqi 830011China Department of Geochemistry and Environmental Sciences School of Earth and Space SciencesUniversity of Science and Technology of ChinaHefei 230026China Department of Earth and Sciences Faculty of SciencesUniversity of KurdistanSanandajIran Department of Science Education Farhangian UniversityTehranIran

The Hesar pluton in the northern Urumieh-Dokhtar magmatic arc hosts numerous mafic-microgranular enclaves(MMEs).Whole rock geochemistry,mineral chemistry,zircon U-Pb and Sr-Nd isotopes were *** is suggested that the rocks are metaluminous(A/CNK=1.32-1.45),subduction-related I-type calc-alkaline gabbro to diorite with similar mineral assemblages and geochemical *** host rocks yielded an U-Pb crystallization age of 37.3±0.4 Ma for *** have relatively low SiO_(2) contents(52.9-56.6 wt%)and high Mg^(#)(49.8-58.7),probably reflecting a mantle-derived ***-and mantle-normalized trace element patterns are characterized by LREE and LILE enrichment,HREE and HFSE depletion with slight negative Eu anomalies(Eu/Eu^(*)=0.86-1.03).The host rocks yield(^(87)Sr/^(86)Sr)_(i) ratios of 0.70492-0.70510,positive ε_(Nd)(t)values of+1.55-+2.06 and T_(DM2)of 707-736 Ma,which is consistent with the associated mafic microgranular enclaves((^(87)Sr/^(86)Sr)_(i)=0.705014,ε_(Nd)(t)=+1.75,T_(DM2)=729 Ma).All data suggest magma-mixing for enclave and host rock formation,showing a complete equilibration between mixed-mafic and felsic magmas,followed by rapid *** T_(DM1)(Nd)and T_(DM2)(Nd)model ages and U-Pb dating indicate that the host pluton was produced by partial melting of the lower continental crust and subsequent mixing with injected lithospheric mantlederived magmas in a pre-collisional setting of Arabian-Eurasian *** composition indicates a crystallization temperature of~1000℃ and a depth of~9 km.

关键词： enclave magma mixing zircon U-Pb dating Urumieh-Dokhtar magmatic arc

Studying the effect of surfactant assisted low-salinity water flooding on clay-rich sandstones

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Petroleum 2024年第2期10卷 306-318页

作者： Saeed Khezerloo-ye Aghdam alireza kazemi Mohammad Ahmadi Department of Petroleum Engineering Amirkabir University of Technology (AUT) Department of Petroleum and Chemical Engineering College of Engineering Sultan Qaboos University

Sandstone reservoirs often contain clay particles that can cause damage and reduce permeability during low-salinity water flooding. In this study, the effect of surfactants on fine migration in clay-rich sandstones and its impact on oil recovery was ***, the impact of surfactants on interparticle forces in fine-matrix, fine-fine, and oil-matrix systems was modeled. The results showed that both CTAB(cetyltrimethyl ammonium bromide) and QS(quillaja saponin) cause EDL compaction, weakening the repulsive forces. However, SDS(sodium dodecyl sulfate)and TX(triton X-100) do not affect the EDL. Next, the effect of surfactants on IFT reduction and wettability alteration was experimentally investigated. All surfactants reduced IFT due to the surface excessive concentration mechanism. The wettability alteration experiment illustrated that although QS and CTAB compact EDL around oil and matrix particles leading to attraction force augmentation, they both alter wettability through adsorption on matrix and carboxylic groups present in crude oil, *** aqueous solutions were then injected into various clay-rich sandstone sanpacks, which resulted in increased oil recovery. However, the mechanisms leading to enhanced oil recovery variedby surfactant type. CTAB increased recovery by 10% through IFT reduction and wettability alteration, while SDS and TX increased recovery by 12% and 9%, respectively, through wettability alteration and extreme fine migration. In contrast, partial fine migration in the QS flooding experiment reached a recovery increase of 18%. Permeability trends through experiments were also recorded. During CTAB injection,permeability did not reduce, while QS aqueous solution reduced rock permeability to 5 m D. SDS and TX reduced the magnitude of permeability to 2 m *** conclusion, this study demonstrates that surfactants can effectively improve oil recovery in clay-rich sandstones by altering the interparticle forces, reducing IFT, a

关键词： Surfactant flooding Smart water Fine migration Recovery factor

Color and Gloss Changes of a Lignin-Based Polyurethane Coating under Accelerated Weathering

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Journal of Renewable Materials 2024年第2期12卷 305-323页

作者： Fatemeh Hassani Khorshidi Saeed kazemi Najafi Farhood Najafi Antonio Pizzi Dick Sandberg Rabi Behrooz Department of Wood Science and Technology Faculty of Natural ResourcesTarbiat Modares UniversityTehranIran Department of Resin and Additives Institute for Color Science and TechnologyP.O.Box 16765-654TehranIran LERMAB University of LorraineBlvd des AiguillettesNancy54000France Wood Science and Engineering LuleåUniversity of TechnologySkellefteåSweden

The purpose of this research study was to investigate the properties of polyurethane coatings based on lignin *** this purpose,the prepared coatings were applied to pine wood surfaces and weathered ***,color and gloss of the coatings were measured before and after the weathering *** emission scanning electron microscopy(FE-SEM)micrographs prepared from the coatings showed that the average size of nano-particles in the polyurethane substrate was approximately 500 *** magnetic resonance(13C-NMR)spectroscopy showed that strong urethane bonds were formed in the nano-lignin-based *** calorimetric analysis(DSC)test revealed that the glass-transition temperature(Tg)of lignin nanoparticles modified with diethylenetriamine(DETA)was 112.8℃ and Tg of lignin nano-particles modified with ethylenediamine(EDA)was 102.5℃,which is lower than the Tg of un-modified lignin(114.6℃)and lignin modified with DETA(126.8℃)and lignin modified with EDA(131.3℃).The coatings modified with lignin nano-particles had a greater change in *** lignin nano-particles in the modified coating are trapping hydroxyl radicals which reduces photoactivity and yellowing of the polyurethane by about 3 times compared to unmodified polyurethane *** weathering test,the nano-lignin-based coating had a rougher surface with a lower contact angle(0.78°)compared to the unmodified polyurethane coating(0.85°).

关键词： Amination propylene carbonate lignin biopolymer polyurethane coating polyol UN SDG 13

Optimal motion cueing algorithm for accelerating phase of manned spacecraft in human centrifuge

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Chinese Journal of Aeronautics 2020年第7期33卷 1991-2001页

作者： ali MAHMOODI Isooda kazemi Department of Aerospace Engineering Science and Research BranchIslamic Azad UniversityTehran ***Iran

This paper presents a novel optimal Motion Cueing Algorithm(MCA)to control the rotations of a Human Centrifuge(HC)and achieve the best simulation of a Space Craft(SC)*** of the specific forces sensed by astronauts of the SC and the HC have been derived and linearized.A Linear Quadratic Regulator(LQR)controller is implemented for the problem which tends to minimize the error between the two sensed specific forces as well as control input in a cost *** results in control inputs of the HC to generate its sensed specific force as close as possible to the one in the *** algorithm is implemented for both linearized and nonlinear portions of a US space shuttle mission trajectory as a verification using *** longitudinal direction,the proposed MCA,works well when the acceleration is less than 2 g in which the tracking error does not exceed 12%.In lateral direction the tracking is much better even in nonlinear region since the error remains less than 7%for tilting up to 50°.Finally,the effect of weight matrixes in the LQR cost function on overall weight and power of the HC motion system is discussed.

关键词： Accelerating phase Human centrifuge Manned spacecraft Optimal motion cueing Specific force

Hot deformation behavior of microstructural constituents in a duplex stainless steel during high-temperature straining

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International Journal of Minerals,Metallurgy and Materials 2013年第10期20卷 953-960页

作者： Amir Momeni Shahab kazemi ali Bahrani Materials Science and Engineering Department Hamedan University of Technology Department of Materials Engineering Faculty of EngineeringBu Ali Sina University

The hot deformation characteristics of 1.4462 duplex stainless steel （DSS） were analyzed by considering strain partitioning between austenite and ferrite constituents. The individual behavior of ferrite and austenite in microstructure was studied in an iso-stress condition. Hot compression tests were performed at temperatures of 800-1100~C and strain rates of 0.001-1 s-1. The flow stress was modeled by a hyperbolic sine constitutive equation, the corresponding constants and apparent activation energies were determined for the studied alloys. The constitutive equation and law of mixture were used to measure the contribution factor of each phase at any given strain. It is found that the contribution factor of ferrite exponentially declines as the Zener-HoUomon parameter （Z） increases. On the contrary, the austenite contribution polynomially increases with the increase of Z. At low Z values below 2.6. x 1015 （lnZ---35.5）, a negative contribution factor is determined for austenite that is attributed to dynamic recrystallization. At high Z values, the contribution factor of austenite is about two orders of magnitude greater than that of ferrite, and therefore, austenite can accommodate more strain. Microstructural characterization via electron back-scattered diffraction （EBSD） confirms the mechanical results and shows that austenite recrystallization is possible only at high temperature and low strain rate.

关键词： duplex stainless steel compression testing strain partitioning high temperature operations deformation

Petrogenesis of Middle-Eocene granitoids and their Mafic microgranular enclaves in central Urmia-Dokhtar Magmatic Arc(Iran): Evidence for interaction between felsic and mafic magmas

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Geoscience Frontiers 2019年第2期10卷 705-723页

作者： Kazem kazemi ali Kananian Yilin Xiao Fatemeh Sarjoughian School of Geology College of ScienceUniversity of Tehran Department of Geochemistry and Environmental Science School of Earth and Space SciencesUniversity of Science and Technology of China Department of Earth Sciences Faculty of SciencesUniversity of Kurdistan

Whole rock major and trace element geochemistry together with zircon U-Pb ages and Sr-Nd isotope compositions for the Middle Eocene intrusive rocks in the Haji Abad region are presented. The granitoid hosts, including granodiorite and diorite, yielded zircon U-Pb ages with a weighted mean value of 40.0 ± 0.7 Ma for the granodiorite phase. Mafic microgranular enclaves(MMEs) are common in these plutons, and have relatively low SiO_2 contents(53.04-57.08 wt.%) and high Mg#(42.6-60.1), probably reflecting a mantle-derived origin. The host rocks are metaluminous(A/CNK = 0.69-1.03), arc-related calc-alkaline, and I-type in composition, possessing higher SiO_2 contents(59.7-66.77 wt.%) and lower Mg#(38.6-52.2); they are considered a product of partial melting of the mafic lower crust. Chondritenormalized REE patterns of the MMEs and granitoid hosts are characterized by LREE enrichment and show slight negative Eu anomalies(Eu/Eu* = 0.60-0.93). The host granodiorite samples yield(^(87)Sr/^(86)Sr);ratios ranging from 0.70498 to 0.70591,positive eNd(t) values varying from +0.21 to +2.3, and TDM2 ranging from 760 to 909 Ma, which is consistent with that of associated mafic microgranular enclaves(^(87)Sr/^(86)Sr)i = 0.705111-0.705113, ε_(Nd)(t)= +2.14 to +2.16, T_(DM2) = 697-785 Ma). Petrographic and geochemical characterization together with bulk rock Nd-Sr isotopic data suggest that host rocks and associated enclaves originated by interaction between basaltic lower crust-derived felsic and mantlederived mafic magmas in an active continental margin arc environment.

关键词： Geochemistry U-Pb geochronology Granitoid Haji Abad Low angle subduction Urumieh-Dokhtar Magmatic Arc

Detailed electro-dynamic model of an ultra-fast disconnector including the failure mode

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High Voltage 2020年第5期5卷 549-555页

作者： Mario Zaja ali Asghar Razi-kazemi Dragan Jovcic School of Engineering University of AberdeenAB243UEAberdeenUK

Ultra-fast disconnector(UFD)is a key component of hybrid DC circuit breakers and it is also studied as the main switch in some DC grid topologies.A UFD model suitable for DC grid studies and considering both normal operation and failure mode is *** dynamic motion of contacts is analysed in detail and it is concluded that Thomson coil inductances including parasitic parameters play an important role and it is recommended to use finite element *** arcing mode of UFD is repressed using a variable resistance in series with an ideal *** variable resistance is calculated analytically based on the instantaneous position of contacts and the circuit *** different arc models are recommended:for the air-insulated UFD and SF6 UFD,and in each case,two operating regimes should be considered:high and low *** UFD model is verified for both normal operation and failure mode using measurements on a 5 kV laboratory UFD and the results show very good *** 320 kV SF6 UFD model is evaluated using limited reported results from manufacturers.

关键词： mode dynamic Thomson

Practical reduction of imines by NaBH_4/alumina under solvent-free conditions:An efficient route to secondary amine

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Chinese Chemical Letters 2008年第10期19卷 1167-1170页

作者： Foad kazemi ali Reza Kiasat Ebrahim Sarvestani Institute for Advanced Studies in Basic Sciences(IASBS) Zanjan 45195Iran Chemistry Department College of ScienceShahid Chamran UniversityAhvaz 61357-4-3169Iran

Sodium borohydride supported on alumina reduces imines to the corresponding secondary amines in high to excellent isolated yields under solvent-free conditions. Noteworthy is that highly chemoselective reactions were ... 详细信息

关键词： Imine Secondary amine Solvent free Reduction Sodium borohydride