Patterns of genomic and phenomic diversity in wine and table grapes

作     者：ZoëMigicovsky Jason Sawler Kyle M Gardner Mallikarjuna K Aradhya Bernard H Prins Heidi R Schwaninger Carlos D Bustamante Edward S Buckler Gan-Yuan Zhong Patrick J Brown Sean Myles 

作者机构：Department of PlantFood and Environmental SciencesFaculty of AgricultureDalhousie UniversityTruroB2N 5E3NSCanada Anandia LabsVancouverV6T 1Z4BCCanada Agriculture and Agri-Food CanadaFredericton Research and Development CentreFrederictonE3B 4Z7NBCanada United States Department of Agriculture-Agricultural Research ServiceNational Clonal Germplasm RepositoryUniversity of CaliforniaDavis95616CAUSA United States Department of AgricultureAgricultural Research ServiceGrape Genetics Research UnitNew York State Agricultural Experiment StationCornell UniversityGeneva14456NYUSA Department of GeneticsStanford UniversityStanfordCA 94305USA Department of Plant Breeding and GeneticsCornell UniversityIthaca14853NYUSA United States Department of AgricultureAgricultural Research ServicePlant Genetic Resources UnitNew York State Agricultural Experiment StationCornell UniversityGeneva14456NYUSA Department of Crop ScienceUniversity of IllinoisUrbana61801ILUSA 

出 版 物：《Horticulture Research》 (园艺研究（英文）)

年 卷 期：2017年第4卷第1期

页      面：181-191页

核心收录：

学科分类：07[理学] 070601[理学-气象学] 0706[理学-大气科学] 

基　　金：We acknowledge the funding from the Canada Research Chairs program,the National Sciences and Engineering Research Council of Canada and Genome Canada ZM was supported in part by a Killam Predoctoral Scholarship from Dalhousie University 

主　　题：harbor religious crops 

摘      要：Grapes are one of the most economically and culturally important crops worldwide,and they have been bred for both winemaking and fresh *** we evaluate patterns of diversity across 33 phenotypes collected over a 17-year period from 580 table and wine grape accessions that belong to one of the world’s largest grape gene banks,the grape germplasm collection of the United States Department of *** find that phenological events throughout the growing season are correlated,and quantify the marked difference in size between table and wine *** pairing publicly available historical phenotype data with genome-wide polymorphism data,we identify large effect loci controlling traits that have been targeted during domestication and breeding,including hermaphroditism,lighter skin pigmentation and muscat *** for larger berries in table grapes was traditionally concentrated in geographic regions where Islam predominates and alcohol was prohibited,whereas wine grapes retained the ancestral smaller size that is more desirable for winemaking in predominantly Christian *** uncover a novel locus with a suggestive association with berry size that harbors a signature of positive selection for larger *** results suggest that religious rules concerning alcohol consumption have had a marked impact on patterns of phenomic and genomic diversity in grapes.