Genomic structural variation in tomato and its role in plant immunity

作     者：Emma Jobson Robyn Roberts 

作者机构：Montana State University ExtensionMontana State UniversityBozemanMT 59717United States Agricultural Biology DepartmentCollege of Agricultural SciencesColorado State UniversityFort CollinsCOUSA 

出 版 物：《Molecular Horticulture》 (分子园艺（英文）)

年 卷 期：2022年第2卷第1期

页      面：91-100页

核心收录：

学科分类：09[农学] 0902[农学-园艺学] 090202[农学-蔬菜学] 

基　　金：Funding to RR was provided by the USDA Extension IPM Implementation Program(COL0-2017-04499,2021-70006-35439) the Colorado State University Agricultural Experiment Station(COL00410) Colorado State University startup funds.Funding to EJ was provided by Montana State Extension 

主　　题：Immunity Structural variation Tomato Genetic engineering Disease Sequencing 

摘      要：It is well known that large genomic variations can greatly impact the phenotype of an *** Variants(SVs)encompass any genomic variation larger than 30 base pairs,and include changes caused by deletions,inversions,duplications,transversions,and other genome *** to their size and complex nature,until recently,it has been difficult to truly capture these *** advances in sequencing technology and computational analyses now permit more extensive studies of SVs in plant *** tomato,advances in sequencing technology have allowed researchers to sequence hundreds of genomes from tomatoes,and tomato *** studies have identified SVs related to fruit size and flavor,as well as plant disease response,resistance/susceptibility,and the ability of plants to detect pathogens(immunity).In this review,we discuss the implications for genomic structural variation in plants with a focus on its role in tomato *** also discuss how advances in sequencing technology have led to new discoveries of SVs in more complex genomes,the current evidence for the role of SVs in biotic and abiotic stress responses,and the outlook for genetic modification of SVs to advance plant breeding objectives.