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Cryptic diversity and rampant hybridization in annual gentians on the Qinghai-Tibet plateau revealed by population genomic analysis

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Plant Diversity 2024年第2期46卷 194-205页

作者： Peng-Cheng Fu Qiao-Qiao Guo Di Chang Qing-Bo Gao Shan-Shan Sun School of Life Science Luoyang Normal UniversityLuoyang 471934PR China Key Laboratory of Adaptation and Evolution of plateau Biota Northwest Institute of Plateau BiologyChinese Academy of SciencesXining 810001PR China

Understanding the evolutionary and ecological processes involved in population differentiation and speciation provides critical insights into biodiversity formation. In this study, we employed 29,865 single nucleotide polymorphisms(SNPs) and complete plastomes to examine genomic divergence and hybridization in Gentiana aristata, which is endemic to the Qinghai-Tibet plateau(QTP) region. Genetic clustering revealed that G. aristata is characterized by geographic genetic structures with five clusters(West, East, Central, South and North). The West cluster has a specific morphological character(i.e., blue corolla) and higher values of FSTcompared to the remaining clusters, likely the result of the geological barrier formed by the Yangtze River. The West cluster diverged from the other clusters in the Early Pliocene;these remaining clusters diverged from one another in the Early Quaternary. Phylogenetic reconstructions based on SNPs and plastid data revealed substantial cyto-nuclear conflicts. Genetic clustering and D-statistics demonstrated rampant hybridization between the Central and North clusters,along the Bayankala Mountains, which form the geological barrier between the Central and North clusters. Species distribution modeling demonstrated the range of G. aristata expanded since the Last Interglacial period. Our findings provide genetic and morphological evidence of cryptic diversity in G. aristata, and identified rampant hybridization between genetic clusters along a geological *** findings suggest that geological barriers and climatic fluctuations have an important role in triggering diversification as well as hybridization, indicating that cryptic diversity and hybridization are essential factors in biodiversity formation within the QTP region.

关键词： Gentiana aristata Hybrid zone Qinghai-Tibet plateau Plastome Nuclear SNPs

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Plants affect the horizontal transmission of a new densovirus infecting the green peach aphid Myzus persicae by modulating honeydew production

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Insect Science 2024年第1期31卷 236-254页

作者： Ya Guo Yani Zhao Yang Yang Yahong Zhang Yuying Li Honggang Tian Tong-Xian Liu Zhaofei Li State Key Laboratory of Crop Stress biology for Arid Areas Key Laboratory of Northwest Loess Plateau Crop Pest Management of Ministry of AgricultureCollege of Plant ProtectionNorthwest A&F UniversityYanglingChina institute of Entomology and institute of Plant Health&Medicine Guizhou UniversityGuiyangChina

In a tritrophic context of plant-insect-entomopathogen,plants play important roles in modulating the interaction of insects and their pathogenic ***,the influence of plants on the transmission of insect viruses has been mainly studied on baculoviruses and some RNA viruses,whereas the impact of plants on other insect viruses is largely ***,we identified a new densovirus infecting the green peach aphid Myzus persicae and tested whether and how host plants influence the transmission of the aphid *** complete single-stranded DNA genome of the virus,*** densovirus 2,is 5727 nt and contains inverted terminal *** and phylogenetic analysis indicated that the virus was distinct from other a few identified aphid *** virus abundance was detected highly in the intestinal tract of aphids,compared with the lower level of it in other tissues including head,embryo,and *** and pepper plants had no obvious effect on the vertical transmission and saliva-mediated horizontal transmission of the ***,the honeydew-mediated horizontal transmission among aphids highly depended on host plants(65%on cabbages versus 17%on peppers).Although the virus concentration in the honeydew produced by aphids between 2 plants was similar,the honeydew production of the infected aphids reared on peppers was dramatically *** together,our results provide evidence that plants influence the horizontal transmission of a new densovirus in an aphid population by modulating honeydew secretion of aphids,suggesting plants may manipulate the spread of an aphid-pathogenic densovirus in nature.

关键词： aphids densovirus host plants MpDV2 Myzus persicae transmission

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Trophic niche and adaptation in highland lizards:sex has greater influences than species matching

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Integrative Zoology 2024年第3期19卷 564-576页

作者： Shengnan YANG Jiapeng QU Ke TANG Xinquan ZHAO Huakun ZHOU Junhua HU Chengdu institute of biology Chinese Academy of SciencesChengduChina Qinghai Provincial Key Laboratory of Restoration Ecology for Cold Region Northwest lnstitute of Plateau BiologyChinese Academy of SciencesXiningChina University of Chinese Academy of Sciences BeijingChina Qinghai University XiningChina

The plateau environments are typically arid,cool,and high altitude,posing formidable challenges to wildlife survival due to resource scarcity and harsh *** ecological adaptability in severe conditions requires a deeper understanding of the niche characteristics of plateau *** niche,which is a comprehensive indicator describing the energy acquisition strategy of animals,remains relatively understudied in plateau ***,by combining stable isotopes and morphological data,we quantified the trophic niches of two allopatric lizard species(Phrynocephalus vlangalii and ***)that live in the hinterland of the Qinghai–Tibetan plateau,and explored how their trophic niches correlate with morphological and environmental *** both trophic niche and morphological traits were similar between species,noteworthy distinctions were observed between male and female Phrynocephalus *** morphological traits associated with predation(*** length and head size)and reproduction(*** length),annual mean temperature,and sex played influential roles in shifting trophic *** results imply that sexual dimorphism may facilitate inter-sex divergence in resource utilization,leading to trophic niche variations in the highland ***,extreme environmental stress can constrain interspecific divergence in morphological and trophic *** findings illustrate the dynamic variations of trophic niches in highland lizards,contributing to a more comprehensive understanding of the adaptation strategies employed by lizard species in plateau environments.

关键词： environmental adaptation Phrynocephalus Qinghai-Tibetan plateau sexual dimorphism stable isotope

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Alpine grassland degradation intensifies the burrowing behavior of small mammals:evidence for a negative feedback loop

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Integrative Zoology 2024年第2期19卷 240-252页

作者： Zaiwei WANG Jiawen YAN Amy MARTIN Dianne HBRUNTON Jiapeng QU Jin-Sheng HE Weihong JI Zhibiao NAN State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems College of Pastoral Agriculture Science and TechnologyLanzhou UniversityLanzhouChina Manaaki Whenua-Landcare Research LincolnNew Zealand School of Natural Sciences Massey University(Albany Campus)AucklandNew Zealand Key Laboratory of Adaptation and Evolution of plateau Biota Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina Qinghai Haibei National Field Research Station of Alpine Grassland Ecosystem Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina institute of Ecology College of Urban and Environmental Sciencesand Key Laboratory for Earth Surface Processes of the Ministry of EducationPeking UniversityBeijingChina

Globally,grassland degradation is an acute ecological *** alpine grassland on the Tibetan plateau,increased densities of various small mammals in degraded grassland are assumed to intensify the degradation process and these mammals are subject to lethal ***,whether the negative impact of small mammals is solely a result of population size or also a result of activity and behavior has not been *** this study,we use plateau pika as a model to compare population size,core area of colony,and the number of burrow entrances and latrines between lightly and severely degraded *** test whether the alleged contribution of pika to grassland degradation is a result of increased population size or increased burrowing activities of individuals in response to lower food *** found that grassland degradation resulted in lower plant species richness,plant height,and ***,the overall population size of pika was not significantly affected by location in lightly and severely degraded ***,pika core areas in severely grassland degradation were significantly larger and had significantly higher densities of burrows and *** study provides convincing evidence that habitat-induced changes in the behavior of small,burrowing mammals,such as pika,can exacerbate grassland *** finding has significant implications for managing small mammals and restoring degraded grassland ecosystems.

关键词： burrowing behavior grassland degradation plateau pika population size small mammals

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Persistence of fertilization effects on soil organic carbon in degraded alpine wetlands in the Yellow River source region

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Journal of Mountain Science 2024年第4期21卷 1358-1371页

作者： DUAN Peng WEI Rongyi WANG Fangping LI Yongxiao SONG Ci HU Bixia YANG Ping ZHOU Huakun YAO Buqing ZHAO Zhizhong Qinghai University Xining 810016China Qinghai Transportation Planning and Design institute Co.Ltd Xining 810000China Key Laboratory of Adaptation and Evolution of plateau Biota Chinese Academy of SciencesXining 810008China Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province Northwest Institute of Plateau BiologyChinese Academy of SciencesXining 810008China Qinghai University of Science and Technology Xining 810016China

In the restoration of degraded wetlands,fertilization can improve the vegetation-soil-microorganisms complex,thereby affecting the organic carbon ***,it is currently unclear whether these effects are *** study employed Biolog-Eco surveys to investigate the changes in vegetation characteristics,soil physicochemical properties,and soil microbial functional diversity in degraded alpine wetlands of the source region of the Yellow River at 3 and 15 months after the application of nitrogen,phosphorus,and organic mixed *** following results were obtained:The addition of nitrogen fertilizer and organic compost significantly affects the soil organic carbon content in degraded *** months after fertilization,nitrogen addition increases soil organic carbon in both lightly and severely degraded wetlands,whereas after 15 months,organic compost enhanced the soil organic carbon level in severely degraded *** equation modeling indicates that fertilization decreases the soil pH and directly or indirectly influences the soil organic carbon levels through variations in the soil water content and the aboveground biomass of *** months after fertilization,nitrogen fertilizer showed a direct positive effect on soil organic ***,organic mixed fertilizer indirectly reduced soil organic carbon by increasing biomass and decreasing soil *** 15 months,none of the fertilizers significantly affected the soil organic carbon *** summary,it can be inferred that the addition of nitrogen fertilizer lacks sustainability in positively influencing the organic carbon content.

关键词： Degraded alpine wetlands Fertilizer Soil organic carbon Temporal variation Vegetation aboveground biomass Yellow River source region

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BrrTCP4b interacts with BrrTTG1 to suppress the development of trichomes in Brassica rapa var. rapa

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Plant Diversity 2024年第3期46卷 416-420页

作者： Cheng Li Li Zhang Hefan Li Yuanwen Duan Xuemei Wen Yongping Yang Xudong Sun The Germplasm Bank of Wild Species Yunnan Key Laboratory of Crop Wild Relatives OmicsInstitute of Tibetan Plateau Research at KunmingKunming Institute of BotanyChinese Academy of SciencesKunming 650201China University of Chinese Academy of Sciences BeijingChina Tibet plateau institute of biology Lhasa 850001TibetChina

The number of trichomes significantly increased in CRISPR/Cas9-edited BrrTCP4b turnip(Brassica rapa ***)***,the underlying molecular mechanism remains to be *** this study,we performed the Y2H screen using BrrTCP4b as the bait,which unveiled an interaction between BrrTCP4b and BrrTTG1,a pivotal WD40-repeat protein transcription factor in the MYB-bHLH-WD40(MBW)*** physical interaction was further validated through bimolecular luciferase complementation and ***,it was found that the interaction between BrrTCP4b and BrrTTG1 could inhibit the activity of MBW complex,resulting in decreased expression of BrrGL2,a positive regulator of trichomes *** contrast,AtTCP4 is known to regulate trichomes development by interacting with AtGL3 in Arabidopsis ***,this study revealed that BrrTCP4b is involved in trichome development by interacting with BrrTTG1 in turnip,indicating a divergence from the mechanisms observed in model plant *** findings contribute to our understanding of the regulatory mechanisms governing trichome development in the non-model plants turnip.

关键词： TCP transcription factor MBW complex Trichome development Turnip

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Collective decision-making and spatial patterns in orientation of an endemic ungulate on the Tibetan plateau

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Current Zoology 2024年第1期70卷 45-58页

作者：严雪婷王旭赵雨梦祝芹杨乐李忠秋 Lab of Animal Behavior&Conservation School of Life SciencesNanjing UniversityNanjingJiangsu210023China Tibet plateau institute of biology Lhasa850000China

Group living animals form striking aggregation patterns and display synchronization,polarization,and collective *** many col-lective behavioral studies have been conducted on small animals like insects and fish,research on large animals is still rare due to the limited availability of field collective *** used drones to record videos and analyzed the decision-making and behavioral spatial patterns in orienta-tion of Kiang(Tibetan wild ass,Equus kiang).Leadership is unevenly distributed among Kiang,with the minority initiating majority behavior-shift *** of individual to join are driven by imitation between group members,and are largely dependent on the number of members who have already *** respond to the behavior and position of neighbors through different *** strongly polarize when moving,therefore adopting a linear *** vigilant,orientation deviation increases as they form a tighter *** remain scattered while feeding and,in that context,adopt a side-by-side *** study reveals partially-shared decision-making among Kiang,whereby copying neighbors provides the wisdom to thrive in harsh *** study also suggests that animals'spatial patterns in orientation depend largely ontheirbehavioral states inachieving synchronization.

关键词： decision-making imitation spatial position Tibetan wild ass

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Heterogeneous population distribution enhances resistance to wheat lodging by optimizing the light environment

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Journal of Integrative Agriculture 2024年第7期23卷 2211-2226页

作者： Yibo Hu Feng Qin Zhen Wu Xiaoqin Wang Xiaolong Ren Zhikuan Jia Zhenlin Wang Xiaoguang Chen Tie Cai College of Agronomy Northwest A&F UniversityYangling 712100China Key Laboratory of Crop Physi-Ecology and Tillage Science in northwestern Loess plateau Ministry of Agriculture and Rural AffairsNorthwest A&F UniversityYangling 712100China College of Agronomy Shandong Agricultural University/State Key Laboratory of Crop BiologyTai’an 271018China Xuzhou institute of Agricultural Sciences in Jiangsu Xuhuai Area Xuzhou 221131China

Lodging is still the key factor that limits continuous increases in wheat yields today,because the mechanical strength of culms is reduced due to low-light stress in populations under high-yield *** mechanical properties of the culm are mainly determined by lignin,which is affected by the light ***,little is known about whether the light environment can be sufficiently improved by changing the population distribution to inhibit culm ***,in this study,we used the wheat cultivar“Xinong 979”to establish a low-density homogeneous distribution treatment(LD),high-density homogeneous distribution treatment(HD),and high-density heterogeneous distribution treatment(HD-h)to study the regulatory effects and mechanism responsible for differences in the lodging resistance of wheat culms under different population *** with LD,HD significantly reduced the light transmittance in the middle and basal layers of the canopy,the net photosynthetic rate in the middle and lower leaves of plants,the accumulation of lignin in the culm,and the breaking resistance of the culm,and thus the lodging index values increased significantly,with lodging rates of 67.5%in 2020–2021 and 59.3%in 2021–*** HD-h,the light transmittance and other indicators in the middle and basal canopy layers were significantly higher than those under HD,and the lodging index decreased to the point that no lodging *** with LD,the activities of phenylalanine ammonia-Lyase(PAL),4-coumarate:coenzyme A ligase(4CL),catechol-O-methyltransferase(COMT),and cinnamyl-alcohol dehydrogenase(CAD)in the lignin synthesis pathway were significantly reduced in the culms under HD during the critical period for culm formation,and the relative expression levels of TaPAL,Ta4CL,TaCOMT,and TaCAD were significantly ***,the activities of lignin synthesis-related enzymes and their gene expression levels were significantly increased under HD-h compare

关键词： canopy light environment lignin lodging population distribution wheat

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Selenium nanoparticles in aquaculture: Unique advantages in the production of Se-enriched grass carp(Ctenopharyngodon idella)

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Animal Nutrition 2024年第1期16卷 189-201页

作者： Chao Zhu Zifang Wu Qimin Liu Xiaolin Wang Lijuan Zheng Shuyang He Fangxia Yang Hong Ji Wuzi Dong College of Animal Science and Technology Northwest A&F University biology Research Centre of Qin Mountains Wildlife Northwest A&F University College of Forestry Northwest A&F University

The production of selenium-enriched fish can contribute to alleviating selenium deficiency in human diets. However, it is still unclear which selenium source, as an additive, can efficiently and costeffectively produce high-quality selenium-enriched fish. This study evaluated the effects of selenium nanoparticles（SeNP）, selenite, and selenomethionine（SeMet） on the growth, antioxidant capacity, selenium content, selenium speciation, and meat quality of grass carp. Ten diets were prepared, including a basal diet（BD） and three concentrations（0.1, 0.3, and 0.9 mg/kg） of SeNP, selenite, and SeMet. A total of600 fish（250.79 ± 1.57 g） were randomly assigned to 30 tanks（3 tanks/group）. Fish were fed the experimental diet three times daily for 60 d. In this study, SeNP most significantly promoted the growth and antioxidant capacity of grass carp, with 0.3 mg/kg SeNP identified as the optimal additive concentration. Additionally, SeNP demonstrated equally excellent bioavailability as SeMet and significantly increased the content of SeMet in grass carp（Ctenopharyngodon idella） muscle. Furthermore, compared to SeMet and selenite, dietary SeNP could more significantly enhance the content of selenocysteine（SeCys2） and methylselenocysteine（MeSeCys） in grass carp muscle tissue. In addition, we have demonstrated that SeCys2and MeSeCys promote apoptosis of cancer cells（HeLa） through the mitochondrial apoptotic pathway（involving Bax and Bcl-2）. Furthermore, as an additive, 0.3 mg/kg SeNP significantly improved the flesh quality of grass carp by reducing crude fat and heavy metal content, as well as increasing the levels of eicosapentaenoic acid（EPA） and docosahexaenoic acid（DHA） and the ratio of n-3/n-6 polyunsaturated fatty acid（PUFA）. In summary, SeNP is the most suitable additive for producing selenium-enriched fish.

关键词： Selenium nanoparticle Speciation analysis Grass carp Selenium additive

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New advances in the study of Tethyan Geodynamic System

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Science China Earth Sciences 2024年第3期67卷 874-878页

作者： Lin DING State Key Laboratory of Tibetan plateau Earth System Science(LATPES) Institute of Tibetan Plateau ResearchChinese Academy of SciencesBeijing 100101China

Tethyan Ocean was initially proposed by Austrian geologist Eduard Suess in 1893. The study of the Tethyan evolution by European geologists has led to the development of modern geology, but not to the establishment of plate tectonics theory(Trümpy, 2001). With the progress in various studies, the concept of Tethys has evolved from a Mesozoic ocean into three long-term evolving oceans:Proto-Tethys, Paleo-Tethys, and Neo-Tethys (Figure 1), and their life cycles cover the entire Phanerozoic era (Wu et al., 2020).

关键词： geology Mesozoic ocean

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