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Characterization of neutral lipases revealed the tissue-specific triacylglyceroi hydrolytic activity in Nilaparvata lugens

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Insect Science 2023年第3期30卷 693-704页

作者： Hui-Hui Zhang Bao-Jun Yang Yong Wu Hao-Li Gao Xu-Min Lin Jian-Zheng Zou Ze-Wen Liu Key Laboratory of Integrated Management of Crop Diseases and Pests(Ministry of Education) College of Plant ProtectionNanjing Agricultural UniversityNanjingChina rice Technology research and development Center China National Rice Research InstituteHangzhouChina

The lipid metabolism plays an essential role in the development andreproduction of insects, and lipases are important enzymes in lipid metabolism. In Nilaparvatalugens, an important insect pest on rice, triacylglycerol hydrolytic activities weredifferent among tissues, with high activity in integument, ovary, and fat body, but low activityin intestine. To figure out the tissue-specific triacylglycerol hydrolytic activity, weidentified 43 lipases in N. lugens. Of these 43 lipases, 23 belonged to neutral lipases, sothis group was selected to perform further experiments on triacylglycerol hydrolysis. Thecomplete motifs of catalytic triads, β9 loop, and lid motif, are required for the triacylglycerolhydrolytic activity in neutral lipases, which were found in some neutral lipases withhigh gene expression levels in integument and ovary, but not in intestine. The recombinantproteins of 3 neutral lipases with or without 3 complete motifs were obtained, and the activitydetermination confirmed the importance of 3 motifs. Silencing XM_022331066.1,which is highly expressed in ovary and with 3 complete motifs, significantly decreasedthe egg production and hatchability of N. lugens, partially through decline of the lipidmetabolism. In summary, at least one-third of important motifs were incomplete in allneutral lipases with high gene expression in intestine, which could partially explain whythe lipase activity in intestine was much lower than that in other tissues. The low activityto hydrolyze triacylglycerol in N. lugens intestine might be associated with its food resourceand nutrient components, and the ovary-specific neutral lipases were important forN. lugens reproduction.

关键词： lipases neutral lipases Nilaparvata lugens reproduction triacylglycerol hydrolytic activity

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Carotenoid isomerase regulates rice tillering and grain productivity by its biosynthesis pathway

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Journal of Integrative Plant Biology 2024年第2期66卷 172-175页

作者： Chaoqing Ding Zhengji Shao Yuping Yan Guangheng Zhang Dali Zeng Li Zhu Jiang Hu Zhenyu Gao Guojun Dong Qian Qian Deyong Ren State Key Laboratory of rice Biology and Breeding ChinaNational Rice Research InstituteHangzhou 310006China

Tillers are unique inflorescence-like branches in grasses,and their number determines the panicle number,plant architecture,and yield(Shang et al.,2021).Tiller formation mainly undergoes axillary meristem(AM)initiation and tiller bud outgrowth(Wang et al.,2018;Yan et al.,2023).The rice(Oryza sativa)KNOX gene OSH1 is expressed in AMs,and an osh1 mutant produces fewer tillers(Tanaka et al.,2015).

关键词： sativa Oryza panicle

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Brassinosteroids Mediate Endogenous Phytohormone Metabolism to Alleviate High Temperature Injury at Panicle Initiation Stage in rice

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rice science 2023年第1期30卷 70-86页

作者： CHEN Yanhua WANG Yaliang CHEN Huizhe XIANG Jing ZHANG Yikai WANG Zhigang ZHU Defeng ZHANG Yuping National Key Laboratory of rice Biology China National Rice Research InstituteHangzhou 310006China

High temperatures cause physiological and biochemical changes and significantly affect young panicle development of rice(Oryza sativa L.).Brassinosteroids play important roles in enhancing crop stress resistance.In this study,we subjected rice cultivars Huanghuazhan(heat-resistant)and IR36(heat-sensitive)to high temperature(HT,40 oC)or normal temperature(NT,33 oC)for 7 d at the panicle initiation stage,in conjunction with application of 24-epibrassinolide[EBR,a synthetic brassinolide(BR)]or brassinazole(BRZ,a BR biosynthesis inhibitor)at the beginning of the treatments.HT exacerbated spikelet degeneration and inhibited young panicle growth,which were partially prevented by EBR application,while BRZ application aggravated the reduction in spikelet number.HT decreased the contents of BR,active cytokinins(aCTK),active gibberellins(aGA)and indole-3-acetic acid(IAA),but increased the content of abscisic acid(ABA)in young panicles.The activities of key enzymes involved in sucrose hydrolysis,glycolysis and the tricarboxylic acid cycle in young panicles were decreased with the change of endogenous hormone levels under HT.In addition,the contents of H2O2 and malondialdehyde(MDA)were increased and the activities of antioxidant enzymes were decreased in young panicles.Exogenous application of EBR induced the expression of phytohormone biosynthesis-related genes and down-regulated the expression of phytohormone catabolism-related genes to increase the contents of endogenous BR,aCTK,aGA and ABA,thus promoting the decomposition and utilization of sucrose in young panicles,enhancing the activities of superoxide dismutase,catalase and peroxidase,and reducing the accumulation of H2O2 and MDA in young panicles,whereas application of BRZ had the opposite physiological effects.These results showed that brassinosteroids mediate endogenous phytohormone metabolism to alleviate HT injury at the panicle initiation stage in rice.

关键词： rice high temperature panicle initiation stage phytohormone metabolism physiological and biochemical indices

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CDE4 encodes a pentatricopeptide repeat protein involved in chloroplast RNA splicing and affects chloroplast development under low-temperature conditions in rice

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Journal of Integrative Plant Biology 2021年第10期63卷 1724-1739页

作者： Xinyong Liu Xichun Zhang Ruijie Cao Guiai Jiao Shikai Hu Gaoneng Shao Zhonghua Sheng Lihong Xie Shaoqing Tang Xiangjin Wei Peisong Hu State Key Laboratory of rice Biology China National Center for Rice ImprovementChina National Rice Research InstituteHangzhou 310006China Guizhou rice research institute Guizhou Academy of Agricultural SciencesGuiyang 550006China

Pentatricopeptide repeat(PPR)proteins play important roles in the post-transcriptional modification of organellar RNAs in plants.However,the function of most PPR proteins remains unknown.Here,we characterized the rice(Oryza sativa L.)chlorophyll deficient 4(cde4)mutant which exhibits an albino phenotype during early leaf development,with decreased chlorophyll contents and abnormal chloroplasts at low-temperature(20℃).Positional cloning revealed that CDE4 encodes a P-type PPR protein localized in chloroplasts.In the cde4 mutant,plastid-encoded polymerase(PEP)-dependent transcript levels were significantly reduced,but transcript levels of nuclear-encoded genes were increased compared to wild-type plants at 20℃.CDE4 directly binds to the transcripts of the chloroplast genes rpl2,ndhA,and ndhB.Intron splicing of these transcripts was defective in the cde4 mutant at 20℃,but was normal at 32℃.Moreover,CDE4 interacts with the guanylate kinase VIRESCENT 2(V2);overexpression of V2 enhanced CDE4 protein stability,thereby rescuing the cde4 phenotype at 20℃.Our results suggest that CDE4 participates in plastid RNA splicing and plays an important role in rice chloroplast development under lowtemperature conditions.

关键词： CDE4 chloroplast development pentatricopeptide repeat(PPR)protein RNA splicing low-temperature Oryza sativa L.

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Changes in the activities of key enzymes and the abundance of functional genes involved in nitrogen transformation in rice rhizosphere soil under different aerated conditions

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Journal of Integrative Agriculture 2023年第3期22卷 923-934页

作者： XU Chun-mei XIAO De-shun CHEN Song CHU Guang LIU Yuan-hui ZHANG Xiu-fu WANG Dan-ying The State Key Laboratoty of rice Biology China National Rice Research InstituteHangzhou 310006P.R.China

Soil microorganisms play important roles in nitrogen transformation. The aim of this study was to characterize changes in the activity of nitrogen transformation enzymes and the abundance of nitrogen function genes in rhizosphere soil aerated using three different methods(continuous flooding(CF), continuous flooding and aeration(CFA), and alternate wetting and drying(AWD)). The abundances of amoA ammonia-oxidizing archaea(AOA) and ammonia-oxidizing bacteria(AOB), nirS, nirK, and nifH genes, and the activities of urease, protease, ammonia oxidase, nitrate reductase, and nitrite reductase were measured at the tillering(S1), heading(S2), and ripening(S3) stages. We analyzed the relationships of the aforementioned microbial activity indices, in addition to soil microbial biomass carbon(MBC) and soil microbial biomass nitrogen(MBN), with the concentration of soil nitrate and ammonium nitrogen. The abundance of nitrogen function genes and the activities of nitrogen invertase in rice rhizosphere soil were higher at S2 compared with S1 and S3 in all treatments. AWD and CFA increased the abundance of amoA and nifH genes, and the activities of urease, protease, and ammonia oxidase, and decreased the abundance of nirS and nirK genes and the activities of nitrate reductase and nitrite reductase, with the effect of AWD being particularly strong. During the entire growth period, the mean abundances of the AOA amoA, AOB amoA, and nifH genes were 2.9, 5.8, and 3.0 higher in the AWD treatment than in the CF treatment, respectively, and the activities of urease, protease, and ammonia oxidase were 1.1, 0.5, and 0.7 higher in the AWD treatment than in the CF treatment, respectively. The abundances of the nirS and nirK genes, and the activities of nitrate reductase and nitrite reductase were 73.6, 84.8, 10.3 and 36.5% lower in the AWD treatment than in the CF treatment, respectively. The abundances of the AOA amoA, AOB amoA, and nifH genes were significantly and positively correlated with the activities of urease, protease, and ammon

关键词： rhizosphere aeration gene abundance enzyme activities soil microbial biomass carbon soil microbial nitrogen

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development of nutritious rice with high zinc/selenium and low cadmium in grains through QTL pyramiding

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Journal of Integrative Plant Biology 2020年第3期62卷 349-359页

作者： Chaolei Liu Shilin Ding Anpeng Zhang Kai Hong Hongzhen Jiang Shenglong Yang Banpu Ruan Bin Zhang Guojun Dong Longbiao Guo Dali Zeng Qian Qian Zhenyu Gao State Key Laboratory of rice Biology China National Rice Research InstituteHangzhou 310006China

Enriching zinc(Zn) and selenium(Se) levels,while reducing cadmium(Cd) concentration in rice grains is of great benefit for human diet and health.Large natural variations in grain Zn, Se, and Cd concentrations in different rice accessions enable Zn/Sebiofortification and Cd-minimization through molecular breeding. Here, we report the development of new elite varieties by pyramiding major quantitative trait loci(QTLs) that significantly contribute to high Zn/Se and low Cd accumulation in grains. A chromosome segment substitution line CSSLGCC7 with the PA64s-derived GCC7 allele in the 93-11 background, exhibited steadily higher Mn and lower Cd concentrations in grains than those of 93-11. This elite chromosome segment substitution line(CSSL) was used as the core breeding material to cross with CSSLs harboring other major QTLs for essential mineral elements, especially CSSLGZC6 for grain Zn concentration and CSSLGSC5 for grain Se concentration. The CSSLGCC7+GZC6 and CSSLGCC7+GSC5 exhibited lower Cd concentration with higher Zn and Se concentrations in grains, respectively. Our study thus provides elite materials for rice breeding targeting high Zn/Se and low Cd concentrations in grains.

关键词： elite breeding pyramid

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Genetic diversity analysis and GWAS reveal the adaptive loci of milling and appearance quality of japonica rice(Oryza sativa L.)in Northeast China

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Journal of Integrative Agriculture 2022年第6期21卷 1539-1550页

作者： XU Xin YE Jun-hua YANG Ying-ying LI Ruo-si LI Zhen WANG Shan SUN Yan-fei ZHANG Meng-chen XU Qun FENG Yue WEI Xing-hua YANG Yao-long State Key Laboratory of rice Biology China National Rice Research InstituteHangzhou 311400P.R.China

Milling and appearance quality are important contributors to rice grain quality.Abundant genetic diversity and a suitable environment are crucial for rice improvement.In this study,we investigated the milling and appearance quality-related traits in a panel of 200 japonica rice cultivars selected from Liaoning,Jilin and Heilongjiang provinces in Northeast China.Pedigree assessment and genetic diversity analysis indicated that cultivars from Jilin harbored the highest genetic diversity among the three geographic regions.An evaluation of grain quality indicated that cultivars from Liaoning showed superior milling quality,whereas cultivars from Heilongjiang tended to exhibit superior appearance quality.Single-and multi-locus genome-wide association studies(GWAS)were conducted to identify loci associated with milling and appearance quality-related traits.Ninety-nine significant single-nucleotide polymorphisms(SNPs)were detected.Three common SNPs were detected using the mixed linear model(MLM),mrMLM,and FASTmrMLM methods.Linkage disequilibrium decay was estimated and indicated three candidate regions(qBRR-1,qBRR-9 and qDEC-3)for further candidate gene analysis.More than 300 genes were located in these candidate regions.Gene Ontology(GO)analysis was performed to discover the potential candidate genes.Genetic diversity analysis of the candidate regions revealed that qBRR-9 may have been subject to strong selection during breeding.These results provide information that will be valuable for the improvement of grain quality in rice breeding.

关键词： rice grain quality GWAS genetic diversity

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Characterization and fine mapping of a semi-rolled leaf mutant srl3 in rice

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Journal of Integrative Agriculture 2022年第11期21卷 3103-3113页

作者： YU Xiao-qi XIE Wei LIU He LIU Wei ZENG Da-li QIAN Qian REN De-yong State Key Laboratory of rice Biology China National Rice Research InstituteHangzhou 310006P.R.China

Moderate leaf rolling can maintain leaf erectness,improve light transmittance in the population,and improve light energy utilization,thereby increasing rice yield.This study used ethyl methanesulfonate(EMS)to treat Yunjing 17(YJ17)and obtained a semi-rolled leaf mutant that was named semi-rolled leaf 3(srl3).We found that the rolled-leaf phenotype was due to the aberrant development of bulliform cells and the loss of sclerenchymatous cells.In addition,the shoot and root length of srl3 seedlings differed from the wild type.The srl3 mutant had significantly lower plant height and seed-setting rate but notably greater tiller number,panicle length,and primary branch number per panicle than the wild type.Genetic analysis showed that a single recessive nuclear gene defined the srl3 mutant,and it was precisely located in a 144-kb region between two insertion-deletion(InDel)markers,M8 and M19,on chromosome 2.In this region,no leaf-rollingrelated genes have been reported previously.Thus,the study indicated that SRL3 is a novel leaf-rolling-related gene,and the results laid the foundation for the cloning and functional analysis of the SRL3 gene.

关键词： rice srl3 semi-rolled leaf bulliform cell sclerenchymatous cell

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Protein Phosphorylation and Phosphoproteome:An Overview of rice

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rice science 2020年第3期27卷 184-200页

作者： Abolore Adijat AJADI Amara CISSE Shakeel AHMAD WANG Yifeng SHU Yazhou LI Shufan LIU Xixi Babatunde Kazeem BELLO Sani Muhammad TAJO TONG Xiaohong ZHANG Jian State Key Laboratory of rice Biology/China National Center for rice Improvement/Laboratory of rice Stress Physiology and Regulation China National Rice Research InstituteHangzhou 310006China Biotechnology Unit National Cereals Research InstituteBadeggiNiger State 912101Nigeria Lianyungang Academy of Agricultural Sciences Lianyungang 222243China Bioresources development Center National Biotechnology Development AgencyKano 700241Nigeria

Protein phosphorylation,one of the major post-translational modifications,plays a crucial role in cell signaling,DNA replication,gene expression and differentiation;and alters enzyme activity and other biological activities;and regulates cell proliferation and enlargement,phytohormone biosynthesis and signaling,plant disease resistance,and grain filling and quality during rice seed development.research work on protein phosphorylation started in the 1950 s with the discovery of phosphorylase a and phosphorylase b which are phospho and dephospho forms of the same enzyme.Over the last decade,rice proteomics has accomplished tremendous progress in setting up techniques to proteome nearly all tissues,organs and organelles.The progress made in this field is evident in number of research works.However,research on rice protein phosphorylation is still at its infancy and there are still many unanswered questions.In this review,the general description of protein phosphorylation,including history,structure,frequency of occurrence and function,are discussed.This work also elucidates the different methods for identification,qualification and finally,the progress in rice phosphoproteome research and perspectives.

关键词： phosphoproteome protein phosphorylation post-translational modification rice

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ABNORMAL FLOWER AND GRAIN 1 encodes OsMADS6 and determines palea identity and affects rice grain yield and quality

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Science China(Life Sciences) 2020年第2期63卷 228-238页

作者： Xiaoqi Yu Saisai Xia Qiankun Xu Yuanjiang Cui Ming Gong Dali Zeng Qiang Zhang Lan Shen Guiai Jiao Zhenyu Gao Jiang Hu Guangheng Zhang Li Zhu Longbiao Guo Deyong Ren Qian Qian State Key Laboratory of rice Biology China National Center for Rice ImprovementChina National Rice Research InstituteHangzhou 310006China

The palea and lemma are floral organ structures unique to grasses;these structures form the hull and directly affect grain size and quality. However, the molecular mechanisms controlling the development of the hull are not well understood. In this study, we characterized the rice(Oryza sativa) abnormal flower and grain1(afg1) mutant, a new allele of OsMADS6. Similar to previously characterized osmads6 alleles, in the afg1 floret, the palea lost its marginal region and acquired the lemma identity. However, in contrast to other osmads6 alleles, the afg1 mutant showed altered grain size and grain quality, with decreased total starch and amylose contents, and increased protein and soluble sugar contents. The analysis of transcriptional activity suggested that AFG1 is a transcriptional activator and may affect grain size by regulating the expression levels of several genes related to cell expansion and proliferation in the afg1 mutant. These results revealed that AFG1 plays an important role in determining palea identity and affecting grain yield and quality in rice.

关键词： rice(Oryza sativa) AFG1 palea transcriptional activator grain yield and quality

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