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Temporal and environmental factors drive community structure and function of methanotrophs in volcanic forest soils

Journal of Forestry Research 2024年第2期35卷 1-13页

作者： Rusong Chai Hongjie Cao Qingyang Huang Lihong Xie Fan Yang Hongbin Yin Heilongjiang Forest Botanical Garden Harbin 150040People’s Republic of China 2 institute of natural resources and ecology Science Academy of Heilongjiang ProvinceHarbin 150040People’s Republic of China

Methanotrophs,organisms that obtain oxygen by oxidizing methane,are recognized as the only known biological sink for atmospheric CH_4,and forest soil methanotrophs play crucial roles in mitigating global *** succession patterns of methanotrophic communities and functions in Wudalianchi volcano forest soils could provide a basis for the study of evolutionary mechanisms between soil microorganisms,the environment,and carbon cycling of temperate forest ecosystems under climate *** this study,the characteristics and drivers of methanotrophic community structure and function of two volcanic soils at different stages of development are analyzed,including an old volcano and a new volcano,which most recently erupted 300 years and 17-19×10^(5)years ago,respectively,and a non-volcano hills as control,based on space for time substitution and Miseq sequencing and bioinformation *** results showed that CH_(4) fluxes were significantly higher in old-stage volcano forest soils than new-stage forest soils and non-volcano forest *** were significant differences in the community composition and diversity of soil methanotrophs from different volcano forest *** was the dominant genus in all soil ***,the relative abundance of Methylococcus,along with Clonothrix,Methyloglobulus,Methylomagum,Methylomonas and Methylosarcina,were the important genera responsible for the differences in methanotrophic community structure in different volcano forest *** relative abundance of methanotroph belonging toγ-proteobacteria was significantly higher than that belonging toα-proteobacteria(P<0.05).Chao1,Shannon and Simpson indices of soil methanotrophic community were significantly lower in new-stage volcanos and were significantly affected by bulk density,total porosity,p H,nitrate,dissolved organic carbon and dissolved organic *** were significant differences in community structure between new-stage and old-stage volcano

关键词： Methanotrophs pmo A Soil development stage Volcanoes Forest soils

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Water quality, habitat, and fish assemblage relationships in middle-order agriculture and forest streams of the Mississippi Alluvial Plain

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Ecological Processes 2024年第1期13卷 217-236页

作者： Matthew L.Skoog Michael A.Eggleton Yushun Chen Department of Aquaculture and Fisheries University of Arkansas at Pine Bluff Minnesota Department of natural resources State Key Laboratory of Freshwater ecology and Biotechnology Institute of Hydrobiology Chinese Academy of Sciences University of Chinese Academy of Sciences

Background Agriculture has greatly influenced water quality, habitats, and fish assemblages in streams of the Mississippi Alluvial Plain(MAP) ecoregion. However, MAP streams have historically been understudied compared to streams in other agricultural regions of the USA. In this study, water quality, habitat, and fish assemblage composition were assessed seasonally(spring, summer, and fall) in eight representative MAP streams located across three U.S. states. The study design included four streams containing highly agricultural watersheds(herein termed “agriculture” streams) and four streams containing mostly forested watersheds(herein termed “forest” streams), which were intended to represent reference conditions for MAP *** In general, forest streams contained significantly better instream and riparian habitats than agriculture streams(P = 0.010–0.040) whereas agriculture streams contained significantly greater levels of primary nutrients(P < 0.001–0.010). Differences between agriculture and forest streams with respect to other physical and chemical variables were intermittent and season dependent. Fish assemblages in agriculture and forest streams were structured primarily along an environmental gradient reflecting instream habitat conditions, water nutrient concentrations, and benthic chlorophyll-a production. Structurally, fish assemblages in both stream types contained many regionally common species, though some species appeared to exhibit affinities for a particular stream type. Functionally, fish assemblages in agriculture streams contained more tolerant species, more omnivores, and fewer insectivores compared to forest stream assemblages, which were nearly all insectivores. Overall, one-third of the fish specimens collected in forest streams classified as intolerant *** Our results suggested that stream water quality, habitat, and fish assemblages differed between agriculture and forest streams in the MAP, with fish assemblages e

关键词： Agriculture Stream Land use Water quality Habitat Fish Multivariate statistics Mississippi Alluvial Plain

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A four-band index for both liquid and solid water and its applications in the Aral Sea Basin

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Science China Earth Sciences 2024年第3期67卷 769-788页

作者： Bing YUE Xi CHEN Saibo LI Zhengping DU John WILSON Junhui YANG Yimen JIAO Shuangyan HUANG Chenghu ZHOU Xinjiang institute of ecology and Geography Chinese Academy of SciencesUrumqi 830011China College of resources and Environment University of Chinese Academy of SciencesBeijing 100049China institute of Geographical Sciences and natural resources Research Chinese Academy of SciencesBeijing 100101China Spatial Sciences institute University of Southern CaliforniaLos AngelesCA 90089-0374USA

Various investigations have been conducted to analyze the water-coverage area of the Aral Sea and the Aral Sea Basin(ASB). However, the investigations incorporated considerable uncertainty and the used water indices had misclassification problem, which made different research groups present different results. Thus we first ascertain the boundaries of the ASB, the Syr and Amu river basins as well as their upper, middle and lower reaches. Then a four-band index for both liquid and solid water(ILSW) is proposed to address the misclassification problems of the classic water indices. ILSW is calculated by using the reflectance values of the green, red, near infrared, and thermal infrared bands, which combines the normalized difference water index(NDWI) and land surface temperature(LST) together. Validation results show that the ILSW water index has the highest accuracy by far in the Aral Sea Basin. Our results indicate that annual average decline of the water-coverage area was 963 km^(2) in the southern Aral Sea, whereas the northern Aral Sea has experienced little change. In the meanwhile, permanent ice and snow in upper reach of ASB has retreated considerably. Annual retreating rates of the permanent ice and snow were respectively 6233and 3841 km^(2) in upper reaches of Amu river basin(UARB) and Syr river basin(USRB). One of major reasons is that climate has become warmer in ASB. The climate change has caused serious water deficit problem. The water deficit had an increasing trend since the 1990s and its increasing rates was 3.778 billion m^(3) yearly on average. The total water deficit was 76.967 billion m^(3) on average in the whole area of ASB in the 2010s. However, up reaches of Syr river basin(USRB), a component area of ASB, had water surplus of 25.461 billion m^(3). These conclusions are useful for setting out a sustainable development strategy in ASB.

关键词： Aral Sea Basin Syr river basin Amu river basin Water indices Water-coverage area Water deficit Climate change

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Wood anatomy chronologies of Scots pine in the foothills of the Western Sayan(Siberia)

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Journal of Forestry Research 2024年第3期35卷 13-27页

作者： Elena A.Babushkina Dmitry R.Dergunov Mikhail S.Zharkov Liliana V.Belokopytova Dina F.Zhirnova Bao Yang Jingjing Liu Xiaomei Peng Eugene A.Vaganov Khakass Technical institute Siberian Federal UniversityAbakan 655017Russia institute of ecology and Geography Siberian Federal UniversityKrasnoyarsk 660036Russia Mathematical Methods and IT Department Siberian Federal UniversityKrasnoyarsk 660036Russia Key Laboratory of Desert and Desertification Northwest Institute of Eco-Environment and ResourcesChinese Academy of SciencesLanzhou 730000People's Republic of China School of Geographic and Oceanographic Sciences Nanjing UniversityNanjing 210093People's Republic of China Department of Dendroecology V.N.Sukachev Institute of ForestSiberian Branch of the Russian Academy of ScienceKrasnoyarsk 660036Russia

Recent methodological advances in quantitative wood anatomy have provided new insights into the climatic responses of radial growth at the scale of cell structure of tree rings. This study considered long-term chronologies of tracheid measurements, indexed by a novel approach to separate their specific climatic responses from signal recorded in cell production(closely reflected in tree-ring width). To fill gaps in understanding the impact of climate on conifer xylem structure, Scots pine(Pinus sylvestris L.)trees > 200 years old were selected within the forest-steppe zone in southern Siberia. Such habitats undergo mild moisture deficits and the resulting climatic regulation of growth processes. Mean and maximum values of cell radial diameter and cell wall thickness were recorded for each tree *** a low level of climatogenic stress, components of cell chronologies independent of cambial activity were separated to obtain significant climatic signals revealing the timing of the specific stages of tracheid differentiation. Cell expansion lasted from mid-April to July and was impacted similarly to tree-ring width(stimulated by precipitation and stressed by heat), maximum cell size formed late June. A switch in the climatic responses of mean anatomical traits indicated transition to latewood in mid-July. Secondary wall deposition lasted until mid-September, suppressed by end of season temperatures. Generally, anatomical climatic responses were modulated by a less dry May and September compared with summer months.

关键词： Quantitative wood anatomy Cell radial size Cell wall thickness Pinus sylvestris Climatic response

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Effects of nutrient limitations on the sinking velocity of Thalassiosira weissflogii

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Acta Oceanologica Sinica 2024年第6期43卷 163-172页

作者： Jie Zhu Qiang Hao Wei Zhang Yingying Ma Jiangning Zeng Ocean College Zhejiang UniversityZhoushan 316000China Second institute of Oceanography Ministry of Natural ResourcesHangzhou 310012China Key Laboratory of Marine Ecosystem Dynamics Ministry of Natural ResourcesHangzhou 310012China Zhejiang Key Laboratory of Nearshore Engineering Environment and Ecological Security Hangzhou 310012China Tianjin Key Lab of Aqua-ecology and Aquaculture College of FisheriesTianjin Agricultural UniversityTianjin 300384China

The sinking of diatoms is critic al to the formation of oceanic biological pumps and coastal hypoxic ***,little is known about the effects of different nutrient restrictions on diatom *** this study,we measured the sinking velocity(SV) of Thalassiosira weissflogii using a new phytoplankton video observation instrument and analyzed major biochemical components under varying nutrient *** results showed that the SV of *** under different nutrient limitation conditions varied *** highest SV of(1.77±0.02) m/d was obtained under nitrate limitation,signific antly surpassing that under phosphate limitation at(0.98±0.13) m/*** the nutrient limitation was released,the SV steadily decreased to(0.32±0.03) m/d and(0.15±0.05) m/d,***;under conditions with limited nitrate and phosphate concentrations,the SV values of *** significantly positively correlated with the lipid content(P <0.001),with R^(2) values of 0.86 and 0.69,*** change of the phytoplankton SV was primarily related to the intracellular compo sition,which is controlled by nutrient conditions but did not significantly correlate with transparent extracellular polymer and biosilica *** results of this study help to understand the regulation of the vertical sinking process of diatoms by nutrient restriction and provide new insights into phytoplankton dynamics and their relationship with the marine nutrient structure.

关键词： nutrient limitation Thalassiosira weissflogii sinking velocity biochemical component lipid content

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Patterns and drivers of seasonal water sources for artificial sand-fixing plants in the northeastern Mu Us sandy land,Northwest China

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Pedosphere 2024年第1期34卷 63-77页

作者： Yanwu PEI Laiming HUANG Ming'an SHAO Jiao WANG Yinglong ZHANG Yellow River Delta Modern Agricultural Engineering Laboratory Institute of Geographic Sciences and Natural Resources ResearchChinese Academy of SciencesBeijing 100101China College of natural resources and Environment Northwest Agriculture and Forestry UniversityYangling 712100China State Key Laboratory of Urban and Regional ecology Research Center for Eco-Environmental Sciences of Chinese Academy of SciencesBeijing 100085China College of resources and Environment University of Chinese Academy of SciencesBeijing 100049China Shenmu Ecological Association Shenmu 719399China

Understanding plant water-use patterns is important for improving water-use efficiency and for sustainable vegetation restoration in arid and semi-arid regions. However, seasonal variations in water sources and their control by different sand-fixing plants in water-limited desert ecosystems remain poorly understood. In this study, stable isotopic ratios of hydrogen(δ^(2)H) and oxygen(δ^(18)O) in precipitation, soil water, groundwater, and xylem water were determined to document seasonal changes in water uptake by three representative plant species(Pinus sylvestris var. mongolica Litv., Amygdalus pedunculata Pall., and Salix psammophila) in the northeastern Mu Us sandy land, Northwest China. Based on the depth distribution and temporal variation of measured gravimetric soil water content(SWC), the soil water profile of the three species stands was divided into active(0.01 g g^(-1)45%) layers. Annually, P. sylvestris, A. pedunculata, and S. psammophila obtained most water from deep(59.2%±9.7%, moist layer and groundwater),intermediate(57.4%±9.8%, stable and moist layers), and shallow(54.4%±10.5%, active and stable layers) sources, respectively. Seasonally, the three plant species absorbed more than 60% of their total water uptake from the moist layer and groundwater in the early(June) dry season;then, they switched to the active and stable layers in the rainy season(July–September) for water resources(50.1%–62.5%). In the late(October–November) dry season, P. sylvestris(54.5%–66.2%) and A. pedunculata(52.9%–63.6%) mainly used water from stable and moist layers, whereas S. psammophila(52.6%–70.7%) still extracted water predominantly from active and stable layers. Variations in the soil water profile induced by seasonal fluctuations in precipitation and groundwater levels and discrepancies in plant pheno

关键词： desert ecosystem MixSIAR model plant water uptake soil moisture stable isotopes vegetation restoration water-use efficiency

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Linking coral fluorescence phenotypes to thermal bleaching in the reef-building Galaxea fascicularis from the northern South China Sea

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Marine Life Science & Technology 2024年第1期6卷 155-167页

作者： Sanqiang Gong Jiayuan Liang Gang Li Lijia Xu Yehui Tan Xinqing Zheng Xuejie Jin Kefu Yu Xiaomin Xia Key Laboratory of Tropical Marine Bio-resources and ecology&Guangdong Provincial Key Laboratory of Applied Marine Biology South China Sea Institute of OceanologyChinese Academy of SciencesGuangzhou 510301China Southern Marine Science and Engineering Guangdong Laboratory(Guangzhou) Guangzhou 510301China Coral Reef Research Center of China Guangxi UniversityNanning 53004China South China institute of Environmental Sciences The Ministry of Ecology and Environment of PRCGuangzhou 510530China Third institute of Oceanography Ministry of Natural ResourcesXiamen 361005China

Coral fluorescence phenotypes have been suggested as an adaptation to a broad range of environmental conditions,yet the mechanisms linking thermal bleaching tolerance in reef-building coral populations,associated with fluorescence phenotypes due to GFP-like proteins,remains *** this study,the relationship between the thermal sensitivity and phenotypic plasticity of corals was investigated using two phenotypes of Galaxea fascicularis,green and *** results reveal that brown *** was more susceptible to bleaching than green *** when exposed to a higher growth temperature of 32℃.Both phenotypes of *** were associated with the thermotolerant Symbiodiniaceae symbiont,Durusdinium ***,the brown *** showed a significant decrease in Symbiodiniaceae cell density and a significant increase in pathogenic bacteria abundance when the growth temperature was raised from 29 to 32℃.The physiological traits and transcriptomic profiles of Symbiodiniaceae were not notably affected,but there were differences in the transcriptional levels of certain genes between the two phenotype hosts of *** heat stress of 32℃,the gene encoding green fluorescent protein(GFP)-like and chromosome-associated proteins,as well as genes related to oxidative phosphorylation,cell growth and death showed lower transcriptional levels in the brown *** compared to the green ***,the results demonstrate that the green form of *** is better able to tolerate ocean warming and defend against pathogenic bacteria,likely due to higher gene transcription levels and defense ability.

关键词： Fluorescence phenotype Thermal bleaching Microbiome Galaxea fascicularis Ocean warming

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Responding of zooplankton to environmental factor changes in the Changjiang River estuarine regions in spring-summer from 2016 to 2020

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Journal of Oceanology and Limnology 2024年第2期42卷 544-559页

作者： Jieqing YANG Dongrong ZHANG Yuange CHEN Longling OUYANG Yangyang YANG Jin ZHOU Yunrong SHI East China Sea Fisheries Research institute Chinese Academy of Fishery SciencesKey Laboratory of East China Sea Fishery Resources ExploitationMinistry of Agriculture and Rural AffairsShanghai 200090China Key Laboratory of Engineering Oceanography Second Institute of OceanographyMinistry of Natural ResourcesHangzhou 310012China College of Marine ecology and Environment Shanghai Ocean UniversityShanghai 201306China

The estuarine areas are under frequent influence from freshwater intrusion and ocean currents,in which zooplankton species are diversified and variable as they are sensitive to physio-chemical variations in ***,understanding the relationships between zooplankton and environmental factors help us know the water *** achieve co-existence with species in similar ecological group or habit,they could inevitably alter themselves to fit the ecology and adjust the function according to the competitive exclusion in ecological ***,information of the co-existence of dominant species in the Changjiang(Yangtze)River estuary(CRE)and adjacent waters remains *** explored the relationships between dominant zooplankton and environmental factors in the study region in spring-summer from 2016 to 2020,involving particularly the composition of dominant species,ecological groups,their relationships with environmental factors,and co-existence of important species,using the non-multidimensional scale analysis(nMDS)method and redundancy *** show that Labidocera euchaeta and Tortanus vermiculus were dominant species in the study *** turnover rate of dominant zooplankton was greater(>50%)in spring while the species number was higher in *** dominant species were estuarine,offshore,and eurytopic based on the adaptation to *** spring,the ecological groups were dominated by estuarine species,while in summer by estuarine and offshore *** addition,the nMDS showed that the dominant species in the same ecological group were more dispersed and not prominently clustered;the dominant species were staggered among different ecological *** temperature,salinity,pH,dissolved oxygen,and chlorophyll a were the main environmental factors on the distribution of the dominant species in spring,while in summer were dissolved oxygen,temperature,salinity,and *** domination of medusae of Nemopsis bachei and Pleurobrachia globosa in zo

关键词： Changjiang River estuary(CRE) zooplankton dominant species ecological group environmental factor co-existence

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First wetland mapping at 10-m spatial resolution in South America using multi-source and multi-feature remote sensing data

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Science China Earth Sciences 2024年第10期67卷 3252-3269页

作者： Weiwei SUN Gang YANG Yuling HUANG Dehua MAO Ke HUANG Lin ZHU Xiangchao MENG Tian FENG Chao CHEN Yong GE Department of Geography and Spatial Information Techniques Ningbo UniversityNingbo 315211China State Key Laboratory of resources and Environmental Information System Institute of Geographic Sciences&Natural Resources ResearchChinese Academy of SciencesBeijing 100101China natural resources and Planning Bureau Shanghai Pudong New DistrictShanghai 200100China Key Laboratory of Wetland ecology and Environment Northeast Institute of Geography and AgroecologyChinese Academy of SciencesChangchun 130102China Faculty of Electrical Engineering and Computer Science Ningbo UniversityNingbo 315211China School of Geography Science and Geomatics Engineering Suzhou University of Science and TechnologySuzhou 215009China

Wetland degradation has been accelerating in recent years globally. Accurate information on the geographic distribution and categories of wetlands is essential for their conservation and management. Despite being the world′s fourth largest continent, South America has limited research on wetland mapping, and there is currently no available map that provides comprehensive information on wetland distribution and categories in the region. To address this issue, we used Sentinel-1, Sentinel-2 and SRTM data, developed a sample collection method and a wetland mapping method with a collection of multi-source features such as optical features, polarization features and shape features for South American wetlands. We produced a 10-m resolution wetland map based on the Google Earth Engine(GEE) platform. Our Level-1 wetland cover map accurately captured six wetland sub-categories with an overall accuracy of 96.24% and a kappa coefficient of 0.8649, while our Level-2 water cover map included five sub-categories with an overall accuracy of 97.23% and a kappa coefficient of0.9368. The results show that the total area of existing wetlands in South America is approximately 1,737,000 km~2, which is6.8% of the total land area. Among the ten wetland categories, shallow sea had the largest area(960,527.4 km~2), while aquaculture ponds had the smallest area 1513.6 km~2. Swamp had the second largest area(306,240.1 km~2). Brazil, Argentina,Venezuela, Bolivia, and Colombia were found to have the largest wetland areas, with Brazil and Colombia having the most diverse wetland categories. This product can serve as baseline data for subsequent monitoring, management, and conservation of South American wetlands.

关键词： Wetland mapping Google Earth Engine Sentinel imagery South America

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Implication of community-level ecophysiological parameterization to modelling ecosystem productivity:a case study across nine contrasting forest sites in eastern China

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Journal of Forestry Research 2024年第1期35卷 1-11页

作者： Minzhe Fang Changjin Cheng Nianpeng He Guoxin Si Osbert Jianxin Sun School of ecology and Nature Conservation Beijing Forestry UniversityBeijing 100083China Research institute of Energy Saving Environmental ProtectionOccupational Safety and HealthChina Academy of Railway Sciences Corporation LimitedBeijing 100081China Key Laboratory of Ecosystem Network Observation and Modeling Institute of Geographic Sciences and Natural Resources ResearchChinese Academy of SciencesBeijing 100101China College of resources and Environment University of Chinese Academy of SciencesBeijing 100049China

Parameterization is a critical step in modelling ecosystem ***,assigning parameter values can be a technical challenge for structurally complex natural plant communities;uncertainties in model simulations often arise from inappropriate model *** we compared five methods for defining community-level specific leaf area(SLA)and leaf C:N across nine contrasting forest sites along the North-South Transect of Eastern China,including biomass-weighted average for the entire plant community(AP_BW)and four simplified selective sampling(biomass-weighted average over five dominant tree species[5DT_BW],basal area weighted average over five dominant tree species[5DT_AW],biomass-weighted average over all tree species[AT_BW]and basal area weighted average over all tree species[AT_AW]).We found that the default values for SLA and leaf C:N embedded in the Biome-BGC v4.2 were higher than the five computational methods produced across the nine sites,with deviations ranging from 28.0 to 73.3%.In addition,there were only slight deviations(<10%)between the whole plant community sampling(AP_BW)predicted NPP and the four simplified selective sampling methods,and no significant difference between the predictions of AT_BW and AP_BW except the Shennongjia *** findings in this study highlights the critical importance of computational strategies for community-level parameterization in ecosystem process modelling,and will support the choice of parameterization methods.

关键词： Biome-BGC Community traits Forest Ecosystems Model parameterization

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