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Comparative proteomics analysis of pomegranate seeds on fruit maturation period(Punica granatum L.)

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Journal of Integrative Agriculture 2015年第12期14卷 2558-2564页

作者： CAO Shang-yin NIU Juan CAO Da LI Hao-xian XUE Hui CHEN Li-na ZHANG Fu-hong ZHAO Di-guang Zhengzhou Fruit Research institute Chinese Academy of Agricultural Sciences School of biosciences Faculty of Science The University of Melbourne

Seeds play a central role in the life cycle of plants. Seed hardness in pomegranates is of economic relevance, yet scarcely studied and poorly understood in China. In this study, we compared the proteomic differences between Zhongnonghong（soft-seeded） and Sanbai（hard-seeded） pomegranates. A total of 892 protein spots from both varieties were detected on two-dimensional electrophoresis gels（2-DE）; 76 spots showed greater than a 1.5-fold or less than a 0.66-fold difference（P〈0.05） in Zhongnonghong compared to Sanbai, of which 24 exhibited greater than a 2-fold change. Compared with Sanbai, Zhongnonghong possessed 14 up-regulated, and 10 down-regulated proteins. We identified and annotated 5 of these by using MALDI-TOF-TOF MS： pyruvate dehydrogenase（PDH） E1-β family protein（spot 4 609）; alanine aminotransferase 2-like（ALT2L）; mitochondrial glycine decarboxylase complex P-protein（spot 5 803）; phosphofructokinase B（Pfk B）-type family of carbohydrate kinase（spot 8 411）; and putative dna K-type molecular chaperone heat shock cognate protein 70（Hsc70）（spot 9 006）. Of these, 3 proteins（spots 4 609, 5 608, 5 803） were hypothesized to play a role in the formation of seed hardness. The other two proteins（spots 8 411, 9 006） were theorized to play a role in protecting the seeds from adverse stress during periods of fruit maturation. This study sets the foundation for further research on molecular mechanisms related to pomegranate seed hardness.

关键词： pomegranates soft-seeded hard-seeded proteomics

Polyethylene glycol has immunoprotective effects on sciatic allografts, but behavioral recovery and graft tolerance require neurorrhaphy and axonal fusion

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Neural Regeneration Research 2025年第4期20卷 1192-1206页

作者： Tyler A.Smith Liwen Zhou Cameron L.Ghergherehchi Michelle Mikesh Cathy Z.Yang Haley O.Tucker JuliAnne Allgood Jared S.Bushman George D.Bittner Department of Molecular biosciences University of Texas at AustinAustinTXUSA Department of Neuroscience University of Texas at AustinAustinTXUSA Division of Pharmaceutical Sciences University of WyomingLaramieWYUSA

Behavioral recovery using(viable)peripheral nerve allografts to repair ablation-type(segmental-loss)peripheral nerve injuries is delayed or poor due to slow and inaccurate axonal ***,such peripheral nerve allografts undergo immunological rejection by the host immune *** contrast,peripheral nerve injuries repaired by polyethylene glycol fusion of peripheral nerve allografts exhibit excellent behavioral recovery within weeks,reduced immune responses,and many axons do not undergo Wallerian *** relative contribution of neurorrhaphy and polyethylene glycol-fusion of axons versus the effects of polyethylene glycol per se was unknown prior to this *** hypothesized that polyethylene glycol might have some immune-protective effects,but polyethylene glycol-fusion was necessary to prevent Wallerian degeneration and functional/behavioral *** examined how polyethylene glycol solutions per se affect functional and behavioral recovery and peripheral nerve allograft morphological and immunological responses in the absence of polyethylene glycol-induced axonal ***-type sciatic nerve injuries in outbred Sprague–Dawley rats were repaired according to a modified protocol using the same solutions as polyethylene glycol-fused peripheral nerve allografts,but peripheral nerve allografts were loose-sutured(loose-sutured polyethylene glycol)with an intentional gap of 1–2 mm to prevent fusion by polyethylene glycol of peripheral nerve allograft axons with host *** to negative control peripheral nerve allografts not treated by polyethylene glycol and in contrast to polyethylene glycol-fused peripheral nerve allografts,animals with loose-sutured polyethylene glycol peripheral nerve allografts exhibited Wallerian degeneration for all axons and myelin degeneration by 7 days postoperatively and did not recover sciatic-mediated behavioral functions by 42 days *** morphological signs of rejection,such as col

关键词： allograft rejection axotomy macrophage myelin nerve repair polyethylene glycol(PEG) sciatic nerve T cell transplantation Wallerian degeneration

Antioxidant Protection Mechanisms Reveal Significant Response in Drought-Induced Oxidative Stress in Some Traditional Rice of Assam, India

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Rice science 2018年第4期25卷 185-196页

作者： Shamsun NAHAR Lakshminarayana R.VEMIREDDY Lingaraj SAHOO Bhaben TANTI Department of Botany Gauhati University Regional agricultural Researc Station Acharya N.G.Ranga Agricultural University Department of biosciences and Bioengineering Indian Institute of Technology Guwahati

Drought tolerance levels and antioxidant protection mechanisms were evaluated for 21 traditional rice varieties of Assam, India, along with Sahbhagi Dhan （drought tolerant） and IR64 （drought sensitive） as controls. Drought was imposed in hydroponic culture with polyethylene glycol 6000 （PEG6000） that was initially standardized with different concentrations. All the rice varieties showed apparent decreases in growth characteristics under drought stress （initially at 15% for 7 d followed by 20% PEG6000 for 7 d in Yoshida medium）. On the basis of standard evaluation score （SES）, eight rice varieties showed high drought tolerance which were carried forward for further biochemical analyses. Based on different morpho- physiological parameters, SN03 （Bora）, SN04 （Prosad Bhog）, SN05 （Kola Joha）, SN06 （Helash Bora）, SN08 （Salihoi Bao）, SN12 （Kola Amona）, SN20 （Ronga Bora） and SN21 （Sok-Bonglong） were identified as promising drought tolerant varieties. The non-enzymatic antioxidants activities viz., glutathione, ascorbate and enzymatic antioxidant activities such as superoxide dismutase （SOD）, catalase （CAT）, guaiacol peroxidase （GPX）, ascorbate peroxidase （APX）, glutathione reductase （GR） in shoots and roots of all the selected varieties revealed significant level of protection mechanisms as compared with controls. Enhancement in activities of the overall antioxidant enzymes including SOD, GPX, CAT, GR and APX under drought stress reflects their role in the adaptation process under water stress.

关键词： drought stress traditional rice standard evaluation score antioxidants protection mechanism antioxidant enzyme

Role of Carbon Substrates Added in the Transformation of Surplus Nitrate to Organic Nitrogen in a Calcareous Soil

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Pedosphere 2013年第2期23卷 205-212页

作者： QIU Shao-Jun JU Xiao-Tang J.INGWERSEN GUO Zi-De C.F.STANGE R.BISHARAT T.STRECK P.CHRISTIE ZHANG Fu-Suo College of agricultural Resources and Environmental Sciences China Agricultural University Ministry of Agriculture Key Laboratory of Plant Nutrition and Fertilizer Institute of Agricultural Resources and Regional PlanningChinese Academy of Agricultural Sciences institute of Soil Science and Land Evaluation University of Hohenheim Federal institute for Geosciences and Natural Resources Agri-Environment Branch Agri-Food and Biosciences Institute

Excessive amounts of nitrate have accumulated in many soils on the North China Plain due to the large amounts of chemical N fertilizers or manures used in combination with low carbon inputs. We investigated the potential of different carbon substrates added to transform soil nitrate into soil organic N （SON）. A 56-d laboratory incubation experiment using the 15N tracer （K15NO3） technique was carried out to elucidate the proportion of SON derived from accumulated soil nitrate following amendment with glucose or maize straw at controlled soil temperature and moisture. The dynamics and isotopic abundance of mineral N （NO3 and NH4＋） and SON and greenhouse gas （N20 and CO2） emissions during the incubation were investigated. Although carbon amendments markedly stimulated transformation of nitrate to newly formed SON, this was only a substitution effect of the newly formed SON with native SON because SON at the end of the incubation period was not significantly different （P 〉 0.05） from that in control soil without added C. At the end of the incubation period, amendment with glucose, a readily available C source, increased nitrate immobilization by 2.65 times and total N20-N emission by 33.7 times, as compared with maize straw amendment. Moreover, the differences in SON and total N20-N emission between the treatments with glucose and maize straw were significant （P 〈 0.05）. However, the total N20-N emission in the straw treatment was not significantly （P ~ 0.05） greater than that in the control. Straw amendment may be a potential option in agricultural practice for transformation of nitrate N to SON and minimization of N20 emitted as well as restriction of NO3-N leaching.

关键词： available C source carbon amendments greenhouse gases N immobilization 15N tracer

Effects of inter-culture, arabinogalactan proteins, and hydrogen peroxide on the plant regeneration of wheat immature embryos

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Journal of Integrative Agriculture 2015年第1期14卷 11-19页

作者： ZHANG Wei WANG Xin-min FAN Rong YIN Gui-xiang WANG Ke DU Li-pu XIAO Le-le YE Xing-guo National Key Facility of Crop Gene Resources and Genetic Improvement/institute of Crop Sciences Chinese Academy of Agricultural Sciences Division of agricultural and Environmental Science School of BiosciencesUniversity of Nottingham

The regeneration rate of wheat immature embryo varies among genotypes, howbeit many elite agriculture wheat varieties have low regeneration rates. Optimization of tissue culture conditions and attempts of adding signal molecules are effective ways to increase plant regeneration rate. Inter-culture is one of ways that have not been investigated in plant tissue culture. Moreover, the use of arabinogalactan proteins （AGPs） and hydrogen peroxide （H202） have been reported to increase regeneration rate in a few plant species other than wheat. The current research pioneeringly uses inter-culture of immature embryos of different wheat genotypes, and also investigates impacts of AGP and H2O2 on the induction of embryogenic calli and plant regeneration. As a result, high-frequency regeneration wheat cultivars Kenong 199 （KN 199） and Xinchun 9 （XC9）, together with low-frequency regeneration wheat line Chinese Spring （CS）, presented striking increase in the induction of embryogenic calli and plant regeneration rate of CS through inter-culture strategy, up to 52.19 and 67.98%, respectively. Adding 50 to 200 mg L-1 AGP or 0.005 to 0.01‰ H2O2 to the callus induction medium, enhanced growth of embryogenic calli and plant regeneration rate in quite a few wheat genotypes. At 50 mg L-1 AGP application level in callus induction medium plant regeneration rates of 8.49,409.06 and 283.16% were achieved for Jimai 22 （JM22）, Jingdong 18 （JD18） and Yangmai 18 （YM18）, respectively; whereas at 100 mg L-1 AGP level, CS （105.44%）, Chuannong 16 （CN16）（80.60%） and Ningchun 4 （NC4）（62.87%） acted the best. Moreover CS （79.05%）, JM22 （7.55%）, CN16 （101.87%）, YM18 （365.56%）, Yangmai 20 （YM20）（10.48%）, and CB301 （187.40%） were more responsive to 0.005 %o of H2O2, and NC4 （35.37%） obtained the highest shoot regeneration rates at 0.01%o of H2O2. Overall, these two methods, inter-culture and AGP （or H2O2） application, can be further applied to wheat transgenic research.

关键词： wheat immature embryos plant regeneration inter-culture arabinogalactan proteins hydrogen peroxide

Cloning of heat shock protein genes from the brown planthopper, Nilaparvata lugens, and the small brown planthopper, Laodelphax striatellus, and their expression in relation to thermal stress

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Insect Science 2008年第5期15卷 415-422页

作者： Dong Hun Kim Sang-Chul Lee Do-Yeon Kwak Kyeong-Yeoll Lee School of Applied biosciences College of Agricultura and Life Sciences Kyungpook National University Daegu Yeongnam agricultural Research institute Milyang Republic of Korea

Three heat shock protein （HSP） genes （hsp70, hsc70, hsp90） were partially cloned from the brown planthopper Nilaparvata lugens and the small brown planthopper Laodelphax striatellus （Homoptera： Delphacidae）, which are serious pests of the rice plant. Sequence comparisons at the deduced amino acid level showed that the three HSPs of planthoppers were most homologous to corresponding HSPs of dipteran and lepidopteran species. Identities of both heat shock cognate 70 and HSP90 were higher than HSP70 in both species. Identity of the HSP70 between the two planthopper species was only 81%, a value much lower than seen among fly and moth groups. Effects of heat and cold shocks were demonstrated on expression of the three hsp genes in the two planthopper species. Heat shock （40 ℃） upregulated the hsp90 level but did not change the hsc70 level in either the nymph and adult stages of either species. On the other hand, the hsp70 level was only upregulated in L. striatellus. This heat shock response was prompt and lasted only for 1 h after treatment. In contrast, cold shock at 4℃ did not change the expression levels of any hsp in either species.

关键词： cold shock gene expression heat shock heat shock protein genes planthoppers thermal stress

The genome sequence of a spider mite,Tetranychustruncatus, provides insights into interspecific host rangevariation and the genetic basis of adaptation to a low-qualityhost plant

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Insect Science 2023年第5期30卷 1208-1228页

作者： Lei Chen Xin-YueYu Xiao-Feng Xue Feng Zhang Li-XueGuo Hua-Meng Zhang Ary A.Hoffmann Xiao-Yue Hong Jing-Tao Sun Department of Entomology Nanjing Agricultural UniversityNanjingChina Bio21 institute School of BiosciencesThe Universityof MelbourneMelbourneVictoriaAustralia

The phytophagous miteTetranychus truncatusis a serious pest in East Asiabut has a relatively narrower host range than the pest miteTetranychus urticae,which canfeed on over 1200 plant ***,we generated a high-quality chromosomal levelgenome *** compared it with that ***,with an emphasis on thegenes related to detoxification and chemoreception,to explore the genomic basis under-lying the evolution of host *** also conducted population genetics analyses(in 86females from 10 populations)and host transfer experiments(in 4 populations)to investi-gate transcription changes following transfer to a low-quality host(Solanum melongena,eggplant),and we established possible connections between fitness on eggplant and genesrelated to detoxification and *** found *** fewer genesrelated to detoxification,transport,and chemoreception ***,with a particularlystrong reduction in gustatory receptor(GR)*** also found widespread transcrip-tional variation ***,which varied in fitness on *** selection on detoxification-related genes throughωvalues and found a nega-tive correlation between expression levels andω*** on the transcription results,as well as the fitness and genetic differences among populations,we identified genes po-tentially involved in adaptation to eggplant *** work provides a genomicresource for this pest mite and new insights into mechanisms underlying the adaptation ofherbivorous mites to host plants.

关键词： detoxification and metabolism gustatory receptors host adaptation spidermites

Movement analysis in the diagnosis and management of Parkinson’s disease

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Neural Regeneration Research 2025年第2期20卷 485-486页

作者： Johannes Burtscher Nicolas Bourdillon Jules MJanssen Daalen Aurélien Patoz Julien FBally Martin Kopp Davide Malatesta Bastiaan RBloem institute of Sport Sciences University of LausanneLausanneSwitzerland Radboud University Medical Center Department of NeurologyDonders Institute for BrainCognition and BehaviorCenter of Expertise for Parkinson and Movement DisordersNijmegenThe Netherlands Radboud University Medical Center Department of Medical BioSciencesNijmegenThe Netherlands Research and Development Department Volodalen Swiss Sport LabAigleSwitzerland Service of Neurology Department of Clinical NeurosciencesLausanne University Hospital(CHUV)and University of Lausanne(UNIL)LausanneSwitzerland Department of Sport Science University of InnsbruckInnsbruckAustria

Challenges in the diagnosis and treatment of Parkinson’s disease:Parkinson’s disease(PD)is an increasingly prevalent neurodegenerative disease,at first sight primarily characterized by motor symptoms,although non-motor symptoms also constitute a major part of the overall ***,this disease cannot be diagnosed reliably until a large part of the vulnerable dopaminergic neurons has been irretrievably lost,and the disease progresses *** biological criteria for PD have been proposed recently and might eventually improve early diagnosis,but they require further validation,and their use will initially be restricted to a research environment(Darweesh et al.,2024).

关键词： diagnosis Clinical eventually

Estimating total nitrogen deposition in agroecosystems in northern China during the wheat cropping season

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Journal of Arid Land 2010年第1期2卷 2-8页

作者： Christie PETER Fangmeier ANDREAS College of Resources and Environmental Sciences China Agricultural University Agri-Environment Branch Agri-Food and Biosciences Institute institute of Plant Ecology and Landscape University of Hohenheim

Atmospheric nitrogen (N) deposition has been poorly documented in northern China, an intensive agricultural and industrial region with large emissions of NHx and NOy. To quantify N deposition, total airborne N deposition was determined at three agricultural sites using a manual integrated total nitrogen input (ITNI) system during growth of winter wheat (Triticum aestivum L.) and Italian ryegrass (Lolium multiflorum Lam.) from September 2005 to May 2006. Total estimated N deposition averaged 54.9 and 43.2 kg N/hm2 across the three sites when wheat was grown to flowering and maturing, respectively. The average value was 50.2 kg N/hm2 when ryegrass was the indicator plant. Both indicator species gave similar total airborne N input results. The intermediate level of N supplied resulted in the highest N deposition, and the ratio of N acquired from deposition to total N content of the whole system decreased with increasing N supply to the roots. The contribution of atmospheric N to the total N content of the wheat and ryegrass sand culture systems ranged from 10% to 24%.

关键词： airborne nitrogen inputs 15N pool dilution method sand culture system biological indicators