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Temperate Stutzerimonas Phage Encoding Toxin-Antitoxin System Genes Represents a Novel Genus

Journal of Ocean University of China 2024年第4期23卷 1087-1101页

作者： ZHANG Hong GUO Ruizhe GAO Chen ZHENG Kaiyang XIONG Yao DONG Yue LIU Yundan WANG Ziyue CHEN Ying WANG Hongmin SHAO Hongbing SUNG Yeong Yik MOK Wen Jye WONG Li Lian MCMINN Andrew WANG Min LIANG Yantao College of Marine Life Sciences Institute of Evolution and Marine BiodiversityMOE Laboratory of Evolution and Marine BiodiversityFrontiers Science Center for Deep Ocean Multispheres and Earth SystemCenter for Ocean Carbon NeutralityOcean University of ChinaQingdao 266003China UMT-OUC Joint Center for Marine Studies Qingdao 266003China Institute of Marine Biotechnology Universiti Malaysia Terengganu21030 Kuala TerengganuMalaysia Institute for Marine and Antarctic Studies University of TasmaniaHobartTAS 7001Australia Haide College Ocean University of ChinaQingdao 266100China The Affiliated Hospital of Qingdao University Qingdao 266001China

Stutzerimonas have been extensively studied due to their remarkable metabolic and physiological ***,research on its phages is currently *** this study,we isolated a novel double-stranded DNA(dsDNA)phage,vB_SstM-PG1,from the marine environment that infects Stutzerimonas stutzeri *** dsDNA genome is 37204 bp long with a G/C content of 64.14%and encodes 54 open reading *** phage possesses a tail packaging structure that is different from known Stutzerimonas stutzeri phages and exhibits structural protein characteristics similar to those of temperate *** addition,two genes of toxin-antitoxin system,including YdaS_antitoxin and HEPN_SAV_6107,were found in the vB_SstM-PG1 genome and play important roles in regulating host growth and *** phylogenetic tree and comparative genomic analysis,it has been determined that vB_SstM-PG1 is not closely related to any phages previously identified in the GenBank ***,it has a connection with enigmatic,uncultured ***,the vB_SstM-PG1 virus exhibits an average nucleotide identity of over 70%with six uncultivated viruses identified in the IMG/VR v4 *** significant finding has resulted in the identification of a novel viral genus known as Metabovirus.

关键词： Stutzerimonas vB_SstM-PG1 Metabovirus temperate phage genomic and phylogenetic analysis

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福建紫金山矿田悦洋银多金属矿床银的赋存状态和沉淀机制

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岩石学报 2024年第3期40卷 987-1002页

作者：刘兰海陈静周涛发孙艺 WHITE Noel C 合肥工业大学资源与环境工程学院合肥工业大学矿床成因与勘查技术研究中心(ODEC)合肥230009 安徽省矿产资源与矿山环境工程技术研究中心合肥230009 Centre of Excellence in Ore Deposits(CODES) University of TasmaniaHobart 7001

浅成低温热液矿床是世界上银矿的重要矿床类型,伴生有金铜铅锌等多种金属。银的赋存状态研究可以为矿床资源禀赋、选冶成本以及经济价值的综合评价提供重要的依据。近年来,矿物自动定量分析系统越来越多地应用到贵金属的赋存状态研究中... 详细信息

浅成低温热液矿床是世界上银矿的重要矿床类型,伴生有金铜铅锌等多种金属。银的赋存状态研究可以为矿床资源禀赋、选冶成本以及经济价值的综合评价提供重要的依据。近年来,矿物自动定量分析系统越来越多地应用到贵金属的赋存状态研究中,相比传统方法而言其能提供精确定量的矿物学信息。悦洋银多金属矿床位于福建省紫金山矿田,是典型的浅成低温热液矿床,是研究银赋存状态的理想选区。通过野外地质调查研究发现,矿体主要受控于岩性边界和断裂构造,主要矿石类型为热液角砾岩型和石英脉型。成矿作用可以分为石英-黄铁矿、石英-黄铁矿-黄铜矿、石英-银多金属、石英-碳酸盐等四个阶段,其中银在石英-银多金属阶段沉淀,可以进一步划分为石英伊利石硫化物亚阶段和石英冰长石硫化物亚阶段。本文在野外地质调查的基础上,针对不同的矿石类型使用TIMA(TESCAN Integrated Mineral Analyzer)自动矿物分析系统,结合显微镜下观察、扫描电镜和电子探针分析手段,对银的赋存形式和分布情况进行了定量化研究,根据矿物共生组合对银沉淀机制及成矿过程进行了探讨。研究结果显示,悦洋矿床中的银90%以上以独立矿物的形式存在,主要是硫化银和自然银,且粒径大多在10~50μm之间;少部分银以次显微包裹体形式存在于黄铜矿中,或以显微包裹体和类质同相形式存在于黄铁矿和闪锌矿中。成矿热液中银主要以硫氢络合物形式运移,主成矿期大量的冰长石与银矿物共生表明沸腾作用是主要的沉淀机制。

关键词：银的赋存状态矿物定量分析银的沉淀机制浅成低温热液矿床紫金山矿田

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Hydrothermal fluid circulation in anisotropic permeable media associated with discrete fractures

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中国有色金属学会会刊：英文版 2000年第4期10卷 542-547页

作者：杨建文 Univ Tasmania Sch Earth Sci Hobart Tas 7001 Australia

A proper form of the Rayleigh number, containing the geometric mean of the vertical and horizontal permeabilities was obtained. The critical value for the onset of stable convection was found. The results proved analytically and numerically that anisotropy in permeability resists the initiation of hydrothermal convection. The equivalence between homogeneously anisotropic media and multiply fractured media was also investigated. It was confirmed that multiply fractured models are comparable to anisotropic models as long as they have the same averaged horizontal or vertical permeabilities and other physical parameters.

关键词： hydrothermal fluid circulation anisotropic permeable media fractures

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Variable retention in Tasmania, Australia: trends over 16 years of monitoring and adaptive management

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Ecological Processes 2019年第1期8卷 305-317页

作者： Robyn E.Scott Mark G.Neyland Susan C.Baker Sustainable Timber Tasmania 99 Bathurst StHobartTasmania 7001Australia School of Natural Sciences and ARC Centre for Forest Value University of TasmaniaPrivate Bag 55HobartTasmania 7001Australia

Background:Variable retention harvesting using aggregated retention(ARN)has been applied in some Tasmanian wet eucalypt forests for>15 *** of ARN in Tasmania differs from most other regions,as forest influence(or the proximity of harvested areas to long-term retention)is primarily used to distinguish ARN from clearfelling rather than retention level,and broadcast burning is used as a regeneration treatment,resulting in a preference for edge aggregates instead of isolated retained *** emphasis on site-level retention of biological legacies and forest influence to facilitate re-establishment of mature forest species ensures that ARN coupes achieve the ecological objectives associated with retention ***:Spatial and survey data collected from operational ARN coupes illustrates the development of this silvicultural practice over time and allows comparisons with conventional *** 90%of ARN coupes have met the forest influence target of>50%.The number of ARN coupes harvested per year has varied,but mean retention levels(29%)and the mean area harvested per coupe(24 ha)have remained the *** influence in ARN coupes has decreased over time,as have perimeter-to-area ratios,largely due to a decrease in the number of island *** these measures of complexity have decreased,ARN coupes still have much greater forest influence,retention,and perimeter-to-area ratios when compared to conventional clearfell,burn and sow(CBS)*** observed decrease in boundary complexity should facilitate regeneration burning in ARN coupes,although no increase in the proportion of burnt seedbed was *** proportion of burnt seedbed is strongly correlated with eucalypt seedling stocking and density in ARN coupes,and these attributes were all significantly lower in recent ARN coupes compared to *** differences appear to be due to achieving better burns in recent CBS coupes,rather than poorer ones in ARN cou

关键词： Retention forestry Silviculture systems Aggregated retention Regeneration burning Regeneration success Forest influence Eucalyptus

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A Flux Based Approximation to Simulate Coupled Hydromechanical Problems for Mines with Heterogeneous Rock Types Using the Material Point Method

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Computer Modeling in Engineering & Sciences 2022年第4期131卷 379-409页

作者： Gysbert Basson Andrew P.Bassom Brian Salmon Institute of Mine Seismology and University of Tasmania Kingston7050Australia School of Natural Sciences-University of Tasmania Sandy BayHobart7001Australia School of Engineering-University of Tasmania Sandy BayHobart7001Australia

Advances in numerical simulation techniques play an important role in helpingmining engineers understand those parts of the rock mass that cannot be readily *** Material Point Method(MPM)is an example of such a tool that is gaining popularity for studying geotechnical *** recent years,the original formulation of MPM has been extended to not only account for simulating the mechanical behaviour of rock under different loading conditions,but also to describe the coupled interaction of pore water and solid phases in *** methods assume that the permeability of mediums is homogeneous,and we show that these MPM techniques fail to accurately capture the correct behaviour of the fluid phase if the permeability of the material is *** this work,we propose a novel implementation of the coupled MPM to address this *** employ an approach commonly used in coupled Finite Volume Methods,known as the Two Point Flux Approximation(TPFA).Our new method is benchmarked against two well-known analytical expressions(a one-dimensional geostatic consolidation and the so-called Mandel-Cryer effect).Its performance is compared to existing coupled MPM approaches for homogeneous *** order to gauge the possible effectiveness of our technique in the field,we apply ourmethod to a case study relating to a mine known to experience severe problems with pore water.

关键词： Fluid permeability Material Point Method mining faults

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Ordovician Intrusive-related Gold-Copper Mineralization in West-Central New South Wales, Australia

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Acta Geologica Sinica(English Edition) 2000年第4期74卷 807-826页

作者： David COOKE Centre for Ore Deposit Research University of Tasmania GPO Box 252-79Hobart 7001 Tasmania Australia

Three major types of Ordovician intrusive-related gold-copper deposits are recognized in central-west New South Wales, Australia: porphyry, skarn and high sulphidation epithermal deposits. These deposits are mainly distributed within two Ordovician volcano-intrusive belts of the Lachlan Fold Belt: the Orange-Wellington Belt and the Parkes-Narromine Belt. Available isotopic age data suggest that mineralization of the three types of deposits is essentially coeval with the Ordovician intrusive rocks (480-430 Ma).Porphyry gold-copper deposits can be further divided into two groups. The first group is associated with monzonite showing shoshonitic features, represented by Cadia and Goonumbla. The second group is associated with diorite and dacite, including the Copper Hill and Cargo gold-copper deposits. Gold skarn is associated with Late Ordovician (430-439 Ma) monzonitic intrusive complexes in the Junction Reefs area (Sheahan-Grants, Frenchmans, and Cor-nishmens), Endeavour 6, 7 and 44, Big and Little Cadia. The epithermal gold deposits with high sulphidation including Gidginbung (Temora) and Peak Hill mainly occur within Ordovician andesite and volcaniclastic rocks, and are associated with advanced argillic alteration. Available isotopic age data indicate that both alteration and mineralization of the porphyry, skarn and epithermal gold-copper deposits are broadly coeval with the Late Ordovician shoshonitic magmatism, which is thought to result from the melting of sub-continental lithosphere caused by Palaeozoic subduction *** Ordovician intrusive-related gold-copper deposits are restricted to two longitudinal parallel volcano-intrusive belts, rarely extending outside them. Diagonal intra-belt trends of mineralization are common, particularly at the intersections of longitudinal and transverse (oblique) fault/fracture zones based on the authors' review of available geological data. The locations of these gold-copper deposits are obviously influenced by transvers

关键词： intrusive-related gold-copper deposit porphyry gold-copper deposit New South Wales Australia diagonal intra-belt trend

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Coupled Eulerian-Lagrangian simulation of a modified direct shearapparatus for the measurement of residual shear strengths

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Journal of Rock Mechanics and Geotechnical Engineering 2021年第5期13卷 1113-1123页

作者： Luke Tatnell Ashley P.Dyson Ali Tolooiyan GHD Group Pty.Ltd. TraralgonVIC3844Australia School of Engineering University of TasmaniaHobartTAS7001Australia

The simulation of large-strain geotechnical laboratory tests with conventional Lagrangian finite element method(FEM)techniques is often problematic due to excessive mesh *** multiple reversal direct shear(MRDS)test can be used to measure the residual shear strength of soils in a laboratory ***,modelling and simulation generally require advanced numerical methods to accommodate the large shear strains concentrated in the shear *** reality,when the standard direct shear(DS)apparatus is used,the MRDS method is prone to two major sources of measurement error:load cap tilting and specimen *** sources of error make it difficult or even impossible to correctly determine the residual shear *** paper presents a modified DS apparatus and multi-reversal multi-stage test method,simulated using the coupled Eulerian-Lagrangian(CEL)method in a finite element *** method was successful in evaluating equipment and preventing both load cap tilting and specimen loss,while modelling large-deformation behaviour that is not readily simulated with the conventional FEM or arbitrary Lagrangian-Eulerian(ALE)***,a modified DS apparatus was created for the purpose of analysing mixtures of organic materials found in an Australian *** results obtained from the modified DS CEL model in combination with laboratory tests show a great improvement in the measured residual shear strength profiles compared to those from the standard *** modified DS setup ensures that accurate material residual shear strengths are calculated,a factor that is vital to ensure appropriate soil behaviour is simulated for numerical analyses of large-scale geotechnical projects.

关键词： Coupled Eulerian-Lagrangian(CEL)simulation Residual shear strength Multi-stage Direct shear(DS) Organic content Cohesive soil

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Right time, right place: The dynamic role of hormones in rhizobial infection and nodulation of legumes

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Plant Communications 2022年第5期3卷 5-18页

作者： Karen Velandia James B.Reid Eloise Foo Discipline of Biological Sciences School of Natural SciencesUniversity of TasmaniaPrivate Bag 55HobartTAS 7001Australia

Many legume plants form beneficial associations with rhizobial bacteria that are hosted in new plant rootorgans, nodules, in which atmospheric nitrogen is fixed. This association requires the precise coordinationof two separate programs, infection in the epidermis and nodule organogenesis in the cortex. There isextensive literature indicating key roles for plant hormones during nodulation, but a detailed analysis ofthe spatial and temporal roles of plant hormones during the different stages of nodulation is *** review analyses the current literature on hormone regulation of infection and organogenesis to revealthe differential roles and interactions of auxin, cytokinin, brassinosteroids, ethylene, and gibberellins during epidermal infection and cortical nodule initiation, development, and function. With the exception ofauxin, all of these hormones suppress infection events. By contrast, there is evidence that all of these hormones promote nodule organogenesis, except ethylene, which suppresses nodule initiation. This differential role for many of the hormones between the epidermal and cortical programs is striking. Future work isrequired to fully examine hormone interactions and create a robust model that integrates this knowledgeinto our understanding of nodulation pathways.

关键词： auxin brassinosteroids cytokinin ethylene gibberellin nodulation

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Transport Across Chloroplast Membranes： Optimizing Photosynthesis for Adverse Environmental Conditions

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Molecular Plant 2016年第3期9卷 356-370页

作者： Igor Pottosin Sergey Shabala Biomedicat Centre University of Colima Colima Colima 28045 Mexico School of Land and Food University of Tasmania Hobart TAS 7001 Australia

Chloroplasts are central to solar light harvesting and photosynthesis. Optimal chloroplast functioning is vitally dependent on a very intensive traffic of metabolites and ions between the cytosol and stroma, and should be attuned for adverse environmental conditions. This is achieved by an orchestrated regulation of a variety of transport systems located at chloroplast membranes such as porines, solute channels, ion-specific cation and anion channels, and various primary and secondary active transport systems. In this review we describe the molecular nature and functional properties of the inner and outer envelope and thylakoid membrane channels and transporters. We then discuss how their orchestrated regulation affects thylakoid structure, electron transport and excitation energy transfer, proton-motive force partition, ion homeostasis, stromal pH regulation, andvolume regulation. We link the activity of key cation and anion transport systems with stress-specific signaling processes in chloroplasts, and discuss how these signals interact with the signals generated in other organelles to optimize the cell performance, with a special emphasis on Ca^2＋ and reactive oxygen species signaling.

关键词： stroma thylakoid p.m.f. envelope reactive oxygen species programmed cell death

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Satellite SAR observation of shallow bottom topography of the east Australia Sea

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Acta Oceanologica Sinica 1999年第2期18卷 215-223页

作者： Zhou Changbao G. Cresswell P. Tildesley and C. S. Nilsson 1.Second Institute of Oceanography, State Oceanic Administration, Hangzhou 310012, China 2. CSIRO Division of Oceanography, hobart, Tasmania 7001, Australia (Received June 9, 1997 accepted August Second Institute of Oceanography State Oceanic Administration Hangzhou 310012 China CSIRO Division of Oceanography Hobart Tasmania 7001 Australia

A preliminary account of synthetic aperture radar (SAR) imaging mechanisms of oceanic bottom topographic features and a description of the principles of the information extracted from SAR images and the processing and the analysis technology of SAR images are made. Some results were obtained from researching shallow topography and its bathymetric features of the regions of offshore in the east Australia Sea by ERS-1 SAR images. The preliminary research indicates that these features covered with SAR have never been reported before and some results of them are yielded for the first time in Australia. This information is very valuable in a great number of applications to oceanic engineering, shipping navigation, marine fishery and environment, as well as oceanographic research and development. The paper comes to the conclusion that SAR remote sensing of oceanography and its applications are of great potential.

关键词： Satellite SAR observation shallow topography China-Australia Science and Technology Cooperative Program.

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