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Bio-Organic geochemistry research in China: Advances,opportunities and challenges

Science China Earth Sciences 2018年第12期61卷 1775-1780页

作者： Chuanlun ZHANG Ping'an PENG Meixun ZHAO Shucheng XIE Jianfang CHEN Weiguo LIU Shenzhen Key Laboratory of Marine Archaea Geo-Omics Department of Ocean Science and EngineeringSouthern University of Science and Technology Laboratory for Marine Geology Qingdao National Laboratory for Marine Science and Technology State Key Laboratory of Organic geochemistry Guangzhou Institute of Geochemistry Chinese Academy of Sciences Key Laboratory of Marine Chemistry Theory and Technology (Ocean University of China) Ministry of Education/Laboratory for Marine Ecology and Environmental Science Qingdao National Laboratory for Marine Science and Technology State Key Laboratory of Biogeology and Environmental Geology School of Earth Sciences China University of Geosciences Key Laboratory of Marine Ecosystem and Biogeochemistry State Oceanic Administration State Key Laboratory of Loess and Quaternary Geology Institute of Earth EnvironmentChinese Academy of Sciences

The discipline of "Bio-Organic geochemistry" is a cross research field between biogeochemistry and traditional organic geochemistry, which focuses on geochemical processes related to the biosynthesis of organic molecules(particularly lipids) by(micro) organisms, organic matter production by primary producers, degradation of organic matter by microbial processes recorded by retainable lipid biomarkers, and organic proxies for studies of paleo-climate, paleo-environments, paleoecology and Earth evolution. This field aims to go beyond the traditional petroleum-oriented Organic geochemistry by integrating with biogeochemical concepts concerned mostly with biomolecules from cellular material such as DNA and lipids. A formal Chinese organization in Bio-Organic geochemistry was established in 2012 when the first conference was held in Guangzhou. This organization has witnessed rapid growth over the past six years with focused research addressing organic proxies in paleoclimate and paleoenvironmental applications, with particular rapid development in glycerol dialkyl glycerol tetraethers-derived proxies. Most progresses in China so far are made following or paralleling the international trend in biogeochemical studies. Things have begun to change with China's ambitious initiatives in several bio-geo programs such as the Ocean Deep Drilling Program of China, the Microbial Hydrosphere Program, the Deep Carbon Observatory, and the Microbiome Program. Looking forward in the 21 st Century, the growing Chinese research community in Bio-Organic geochemistry faces grand opportunities and challenges as Chinese scientists propel themselves toward global research frontiers.

关键词： Bio-Organic geochemistry Biogeochemistry Geomicrobiology Paleoclimate proxies Carbon cycles Microbial genomics

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Nuclear volume effects in kinetic isotope fractionation:A case study of mercury oxidation by chlorine species

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Acta Geochimica 2024年第3期43卷 411-423页

作者： Chenlu Yang Yining Zhang Yun Liu research Center for Planetary Science College of Earth and Planetary SciencesChengdu University of TechnologyChengdu 610059China State Key Laboratory of Ore Deposit geochemistry Institute of GeochemistryChinese Academy of SciencesGuiyang 550081China

It is well-known that the equilibrium isotope fractionation of mercury(Hg)includes classical massdependent fractionations(MDFs)and nuclear volume effect(NVE)induced mass-independent fractionations(MIFs).However,the effect of the NVE on these kinetic processes is not *** total fractionations(MDFs+NVEinduced MIFs)of several representative Hg-incorporated substances were selected and calculated with ab initio calculations in this work for both equilibrium and kinetic ***-induced MIFs were calculated with scaled contact electron densities at the nucleus through systematic evaluations of their accuracy and errors using the Gaussian09 and DIRAC19 packages(named the electron density scaling method).Additionally,the NVE-induced kinetic isotope effect(KIE)of Hg isotopes are also calculated with this method for several representative Hg oxidation reactions by chlorine *** KIEs for 202 Hg/^(198)Hg ranging from−2.27‰to 0.96‰are *** anomalous^(202)Hg-enriched KIEs(δ^(202)Hg/^(198)Hg=0.83‰,0.94‰,and 0.96‰,)caused by the NVE are observed,which are quite different from the classical view(i.e.,light isotopes react faster than the heavy ones).The electron density scaling method we developed in this study can provide an easier way to calculate the NVE-induced KIEs for heavy isotopes and serve to better understand the fractionation mechanisms of mercury isotope systems.

关键词： Nuclear volume effect Kinetic fractionation Hg isotopes Ab initio calculations

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High-pressure minerals and new lunar mineral changesite-(Y) in Chang’e-5 regolith

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Matter and Radiation at Extremes 2024年第2期9卷 90-97页

作者： Jing Yang Wei Du Center for Lunar and Planetary Sciences Institute of GeochemistryChinese Academy of SciencesGuiyang 550081China State Key Laboratory of Ore Deposit geochemistry Institute of GeochemistryChinese Academy of Sciences(CAS)Guiyang 550081China CAS Center for Excellence in Comparative Planetology Hefei 230026China

Forty-five years after the Apollo and Luna missions, China’s Chang’e-5 (CE-5) mission collected ∼1.73 kg of new lunar materials from one ofthe youngest basalt units on the Moon. The CE-5 lunar samples provide opportunities to address some key scientific questions related to theMoon, including the discovery of high-pressure silica polymorphs (seifertite and stishovite) and a new lunar mineral, changesite-(Y). Seifertitewas found to be coexist with stishovite in a silica fragment from CE-5 lunar regolith. This is the first confirmed seifertite in returned lunarsamples. Seifertite has two space group symmetries (Pnc2 and Pbcn) and formed from an α-cristobalite-like phase during “cold” compressionduring a shock event. The aftershock heating process changes some seifertite to stishovite. Thus, this silica fragment records different stagesof an impact process, and the peak shock pressure is estimated to be ∼11 to 40 GPa, which is much lower than the pressure condition forcoexistence of seifertite and stishovite on the phase diagram. Changesite-(Y), with ideal formula (Ca_(8)Y)◻Fe^(2+)(PO_(4))_(7) (where ◻ denotes avacancy) is the first new lunar mineral to be discovered in CE-5 regolith samples. This newly identified phosphate mineral is in the form ofcolumnar crystals and was found in CE-5 basalt fragments. It contains high concentrations of Y and rare earth elements (REE), reaching upto ∼14 wt. % (Y,REE)2O3. The occurrence of changesite-(Y) marks the late-stage fractional crystallization processes of CE-5 basalts combinedwith silicate liquid immiscibility. These new findings demonstrate the significance of studies on high-pressure minerals in lunar materials andthe special nature of lunar magmatic evolution.

关键词： evolution minerals basalt

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The photosynthetic oxygen evolution does not exclude the important role and contribution of bicarbonate photolysis

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Acta Geochimica 2024年第1期43卷 174-179页

作者： Yanyou Wu Shaogang Guo State Key Laboratory of Environmental geochemistry Institute of GeochemistryChinese Academy of SciencesGuiyang 550081People’s Republic of China University of Chinese Academy of Sciences Beijing 100049People’s Republic of China

Photosynthesis is the most important biochemical reaction on Earth. It has co-evolved and developed with the Earth, driving the biogeochemical cycle of all elements on the planet and serving as the only chemical process in nature that can convert light energy into chemical energy. Some heavy oxygen isotopic(^(18)O) labeling experiments have"conclusively" demonstrated that the oxygen released by photosynthesis comes only from water and are written into textbooks. However, it is not difficult to find that bicarbonate has never been excluded from the direct substrate of photosynthesis from beginning to end during the history of photosynthesis research. No convincing mechanism can be used to explain photosynthetic oxygen evolution solely from water photolysis. The bicarbonate effect, the Dole effect, the thermodynamic convenience of bicarbonate photolysis, the crystal structure characteristics of photosystem Ⅱ, and the reinterpretation of heavy oxygen isotopic labeling(^(18)O)experiments all indicate that the photosynthetic oxygen evolution does not exclude the important role and contribution of bicarbonate photolysis. The recently proposed view that bicarbonate photolysis is the premise of water photolysis, bicarbonate photolysis and water photolysis work together with a 1:1(mol/mol) stoichiometric relationship, and the stoichiometric relationship between oxygen and carbon dioxide released during photosynthetic oxygen evolution is also 1:1, has excellent applicability and objectivity, which can logically and reasonably explain the precise coordination between light and dark reactions during photosynthesis, the bicarbonate effect, the Dole effect, the Kok cycle and the neutrality of water and carbon in *** is of great significance for constructing the bionic artificial photosynthetic reactors and scientifically answering the question of the source of elemental stoichiometric relationships in nature.

关键词： Bicarbonate effect Dole effect Kok cycle Heavy oxygen isotope Artificial photosynthetic reactor

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Melting geodynamics reveals a subduction origin for the Purang ophiolite,Tibet,China

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Acta Geochimica 2024年第4期43卷 754-773页

作者： Tao Ruan Zhong-Jie Bai Wei-Guang Zhu Shi-Ji Zheng State Key Laboratory of Ore Deposit geochemistry Institute of GeochemistryChinese Academy of SciencesGuiyang 550081China University of Chinese Academy of Sciences Beijing 100049China

The debate regarding whether the Yarlung-Zangbo ophiolite(YZO)on the south of the Qinghai-Tibet Plateau,formed in a mid-ocean ridge(MOR)or a supra-subduction zone(SSZ)setting has remained *** we present petrological,mineralogical,and geochemical data associated with modeling melting geodynamics of the mantle peridotites from the Purang ophiolite in the western segment of the Yarlung-Zangbo Suture Zone(YZSZ)to explore its tectonic *** Purang lherzolites are characterized by the protogranular texture and have abyssal-peridotite-like mineral compositions,including low Cr^(#)(20-30)and TiO_(2) contents(<0.1wt%)in spinel,high Al_(2)O_(3)(2.9wt%-4.4wt%)and CaO(1.9wt%-3.7wt%)contents in orthopyroxene and LREE-depletion in *** of these lherzolites can be modeled by~11%dynamic melting of the DMM source with a small fraction of melt(~0.5%)entrapped within the source,a similar melting process to typical abyssal *** Purang harzburgites are characterized by the porphyroclastic texture and exhibit highly refractory mineral compositions such as high spinel Cr^(#)(40-68),low orthopyroxene Al_(2)O_(3)(<2.2wt%)and CaO(<1.1wt%)*** in these harzburgites are enriched in Sr(up to 6.0 ppm)and LREE[(Ce)N=0.02-0.4],but depleted in Ti(200 ppm,on average)and HREE[(Yb)N<2].Importantly,the more depleted samples tend to have higher clinopyroxene Sr and LREE *** observations indicate an open-system hydrous melting with a continuous influx of slab fluid at a subduction *** modeled results show that these harzburgites could be formed by 19%-23%hydrous melting with the supply rate of slab fluid at 0.1%-1%.The lower clinopyroxene V/Sc ratios in harzburgites than those in lherzolites suggest a high oxidation stage of the melting system of harzburgites,which is consistent with a hydrous melting environment for these *** is therefore concluded that the Purang ophiolite has experienced a transformat

关键词： Melting geodynamics SSZ peridotites MOR peridotites Clinopyroxene Purang ophiolite

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Age and geochemical evolution of granite magmatism in Olkhon region from Caledonian syncollisional ore-free granite to the rare metal granite and pegmatite of Middle Paleozoic intraplate setting

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China Geology 2024年第1期7卷 63-79页

作者： Viktor Antipin Valentina Makrygina Larisa Kushch Nataliya Sheptyakova Vinogradov Institute of geochemistry SB RAS664033 IrkutskRussia

The detailed description of two granite complexes in the Olkhon subterrane is *** Early Paleozoic Sharanur complex was formed by granitization of gneisses of the Olkhon *** includes migmatites,granite-gneisses,granites and pegmatites of normal alkalinity;they belong to the type of syncollisional *** Middle Paleozoic Aya granite complex includes mother Aya massif of amazonite-bearing granites and several types of rare-metal *** have elevated alkalinity,low of Ba,Sr,and high LILE and HFSE elements *** Aya pegmatites lie in northwest cracks of stretching and associated with the rise of the territory under the influence of the North Asian *** cracks and pegmatites mark the beginning of a new intraplate geodynamic *** geochemical types are distinguished among the pegmatites of this *** are amazonite pegmatites of Li-F type with Ta mineralization and complex type pegmatite with Be-Rb-Nb-Ta and Li-F mineralization(the Ilixin vein).The Tashkiney pegmatite vein is similar to Ilixin,but lies in the gneisses of the Olkhon *** shows high concentrations of Be,Nb,Ta,as well as W,Sn,but lacks Li and F,due to a greater depth and higher temperature of the melt crystallization of this pegmatite.

关键词： Pegmatite geochemistry Submantle plume Magmatism Caledonian collision Middle Paleozoic intraplate setting Be-Rb-Nb-Ta-Li-F mineralization Olkhon region Russia

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Rebuilding the theory of isotope fractionation for evaporation of silicate melts under vacuum condition

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Acta Geochimica 2024年第4期43卷 661-676页

作者： Jie Wang Yun Liu research Center for Planetary Science College of Earth and Planetary SciencesChengdu University of TechnologyChengdu 610059China State Key Laboratory of Ore Deposit geochemistry Institute of GeochemistryChinese Academy of SciencesGuiyang 550081China CAS Center for Excellence in Comparative Planetology Hefei 230026China

Isotope eff ects are pivotal in understanding silicate melt evaporation and planetary accretion *** on the Hertz-Knudsen equation,the current theory often fails to predict observed isotope fractionations of laboratory experiments due to its oversimplified ***,we point out that the Hertz-Knudsen-equation-based theory is incomplete for silicate melt evaporation cases and can only be used for situations where the vaporized species is identical to the one in the *** propose a new model designed for silicate melt evaporation under *** model considers multiple steps including mass transfer,chemical reaction,and *** derivations reveal a kinetic isotopic fractionation factor(KIFF orα)αour model=[m(^(1)species)/m(^(2)species)]^(0.5),where m(species)is the mass of the reactant of reaction/nucleation-limiting step or species of diffusion-limiting step and superscript 1 and 2 represent light and heavy isotopes,*** model can eff ectively reproduce most reported KIFFs of laboratory experiments for various elements,i.e.,Mg,Si,K,Rb,Fe,Ca,and ***,the KIFF-mixing model referring that an overall rate of evaporation can be determined by two steps jointly can account for the eff ects of low P_(H2)pressure,composition,and *** addition,we find that chemical reactions,diffusion,and nucleation can control the overall rate of evaporation of silicate melts by using the fitting slope in ln(−ln f)versus ln(t).Notably,our model allows for the theoretical calculations of parameters like activation energy(E_(a)),providing a novel approach to studying compositional and environmental eff ects on evaporation processes,and shedding light on the formation and evolution of the proto-solar and Earth-Moon systems.

关键词： Evaporation Kinetic isotopic fractionation Chemical kinetics Hertz-Knudsen equation CAIS

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A novel model of the carbon cycle in the Cambrian ocean

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Science China Earth Sciences 2024年第6期67卷 1759-1778页

作者： Huajian WANG Shuichang ZHANG Xiaomei WANG Jin SU Yuntao YE Yuke LIU Key Laboratory of Petroleum geochemistry Research Institute of Petroleum Exploration and DevelopmentChina National Petroleum CorporationBeijing 100083China Key Laboratory of Orogenic Belts and Crustal Evolution School of Earth and Space SciencesPeking UniversityBeijing 100871China

The classic model of the carbon cycle suggests that the extensive burial of ^(12)C-enriched organic carbon leads to a positive carbon isotope(δ^(13)C)excursion(CIE),while massive oxidation of organic carbon results in a negative ***,global events such as the BAsal Cambrian Carbon isotope Excursion(BACE)and the Steptoean Positive Carbon Isotope Excursion(SPICE)are global negative and positive δ^(13)C excursions,respectively,and they also exhibit significant organic carbon burial anomalies,displaying decoupling between carbon isotope anomalies and organic carbon *** on the analyses of the Cambrian carbon cycle and paleoceanographic evolution records from well Tadong2 in the Tarim Basin,we propose a novel model of the carbon cycle in the Cambrian ocean that incorporates oceanic dissolved organic carbon(DOC).Our findings are as follows.(1)The Cambrian ocean maintained substantial DOC reservoirs,which were regulated by ocean currents and paleo-redox conditions and exerted significant influence on the oceanic carbon cycle.(2)The oxidation of the oceanic DOC reservoirs during the early Cambrian led to the BACE and the Asian Phenomenon of the Cambrian petroleum systems,while the expansion of the oceanic DOC reservoirs during the SPICE resulted in a global positive δ^(13)C excursion and the absence of significant organic carbon burial.(3)The deep-basin sedimentary environment in the eastern depression of the Tarim Basin may have fostered the development of organic-rich black shales during the Furongian Series,corresponding to organic carbon burial during the SPICE and representing potential prospects for ultra-deep oil and gas *** research should focus on the formation mechanism,reserve scale,and influencing factors of the oceanic DOC reservoirs,as well as their resource and environmental *** is expected that new breakthroughs will be made in the fields of Earth system science and oil and gas exploration.

关键词： Carbon isotope Organic carbon BACE SPICE Dissolved organic carbon Climate change Black shale

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Extractable and kerogen-bound hopanoids from typical Eocene oil shales in China

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Energy Geoscience 2024年第2期5卷 171-179页

作者： Changbo Zhai Zhirong Zhang John K.Volkman Hong Lu Yan'e Chen SINOPEC Key Laboratory of Petroleum Accumulation Mechanisms Wuxi Institute of Petroleum GeologySINOPEC2060 Lihu RoadWuxiJiangsu213126China SINOPEC Petroleum Exploration and Production research Institute 31 Xueyuan RoadBeijing100083China State Key Laboratory of Organic geochemistry Guangzhou Institute of GeochemistryChinese Academy of ScienceGuangzhou510640GuangdongChina

This study conducted a comparative analysis of extractable hopanoid hydrocarbons and those released via stepwise pyrolysis of typical Eocene immature oil shales in China,namely the Huadian,Maoming,and Fushun *** the Huadian and Maoming shales exhibit immature indicators in extractable and kerogen-bound hopanoids(notably,high abundance of C_(29)to C_(32)17β,21β-hopanes and unsaturated hopenes).In contrast,the Fushun oil shale's hopanoids from extracts and pyrolyzates suggest a higher maturity *** absence of neohopenes in the pyrolyzates of the shales underpins that the kerogenbound hopanoid skeletons resist ***,the Huadian oil shale's asymmetric distribution of C_(29)and C_(30)hopenes and neohopenes hints at the presence of an additional *** unsaturated hopenes,such as hop-20(21)-enes,identified in pyrolyzates of the three kerogens at various pyrolysis temperatures,reveal the occurrence of double bonds in kerogen-bound hopanoid skeletons without methyl *** absence of hop-20-(21)-ene in extracts suggests that it might act as an intermediate of these novel hopenes during the epimerization of hopanoid skeletons within *** extractable and pyrolytic hopanoids'stereochemical alignment indicates that epimerization may occur in both ring systems and alkyl side chains of kerogen-bound hopanoid *** stepwise pyrolysis proves to be a quick screening method for geological hopanoids without causing any significant alteration to the original skeletons even when cracking multiple covalent bonds is necessary.

关键词： Hopanoid Hopane Hopene Neohopene Stepwise pyrolysis Kerogen Eocene oil shale

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Multiple Uplift and Exhumation of the Southeastern Tibetan Plateau:Evidence from Low-Temperature Thermochronology

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Acta Geologica Sinica(English Edition) 2024年第3期98卷 569-584页

作者： WU Limin PENG Touping FAN Weiming ZHAO Guochun GAO Jianfeng DONG Xiaohan PENG Shili MIN Kang Tin Aung MYINT State Key Laboratory of Isotope geochemistry Guangzhou Institute of GeochemistryChinese Academy of SciencesGuangzhou 510640China Chinese Academy of Sciences Center for Excellence in Deep Earth Science Guangzhou 510640China University of Chinese Academy of Sciences Beijing 100049China Chinese Academy of Sciences Center for Excellence in Tibetan Plateau Earth Sciences Beijing 100101China Department of Earth Sciences The University of Hong KongHong Kong 999077China State Key Laboratory of Ore Deposit geochemistry Institute of GeochemistryChinese Academy of SciencesGuiyang 550081China Southern Marine Science and Engineering Guangdong Laboratory(Zhuhai) ZhuhaiGuangdong 519085China Department of Geology University of MandalayMandalay 05011Myanmar

Since the Cenozoic,the Tibetan Plateau has experienced large-scale uplift and outgrowth due to the India-Asia ***,the mechanism and timing of these tectonic processes still remain ***,using apatite fission track dating and inverse thermal modeling,we explore the mechanism of different phases of rapid cooling for different batholiths and intrusions in the southeastern Tibetan *** contrast to previous views,we find that the coeval granitic batholith exposed in the same tectonic zone experienced differential fast uplift in different sites,indicating that the present Tibetan Plateau was the result of differential uplift rather than the entire lithosphere uplift related to lithospheric collapse during Cenozoic *** addition,we also suggest that the 5-2 Ma mantle-related magmatism should be regarded as the critical trigger for the widely coeval cooling event in the southeastern Tibetan Plateau,because it led to the increase in atmospheric CO_(2)level and a hotter upper crust than before,which are efficient for suddenly fast rock weathering and ***,we propose that the current landform of the southeastern Tibetan Plateau was the combined influences of tectonic and climate.

关键词： apatite fission track rapid cooling differential uplift magmatism southeastern Tibetan Plateau

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