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Fungicide tolerant Bradyrhizobium japonicum mitigate toxicity and enhance greengram production under hexaconazole stress

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Journal of Environmental Sciences 2019年第4期31卷 92-108页

作者： Mohammad Shahid Mohd.Saghir Khan Department of agricultural Microbiology Faculty of Agricultural SciencesAligarh Muslim University

Bacterial strain RV9 recovered from greengram nodules tolerated 2400 μg/mL of hexaconazole and was identified by 16 S rDNA sequence analysis as Bradyrhizobium japonicum(KY940048). Strain RV9 produced IAA(61.6 μg/mL), ACC deaminase(51.7 mg/(protein·hr)), solubilized TCP(105 μg/mL), secreted 337.6 μg/mL EPS, and produced SA(52.2 μg/mL) and 2,3-DHBA(28.3 μg/mL). Exopolysaccharides produced by strain RV9 was quantified and characterized by SEM, AFM, EDX and FTIR. Beyond tolerance limit,hexaconazole caused cellular impairment and reduced the viability of strain RV9 revealed by SEM and CLSM. Hexaconazole distorted the root tips and altered nodule structure leading thereby to reduction in the performance of greengram. Also, the level of antioxidant enzymes, proline, TBARS, ROS and cell death was increased in hexaconazole treated plants.CLSM images revealed a concentration dependent increase in the characteristic green and blue fluorescence of hexaconazole treated roots. The application of B. japonicum strain RV9 alleviated the fungicide toxicity and improved the measured plant characteristics. Also,rhizobial cells were localized inside tissues as revealed by CLSM. Colonization of B.japonicum strain RV9 decreased the levels of CAT, POD, APX, GPX and TBARS by 80%, 5%,13%, 13% and 19%, respectively over plants grown at 80 μg/(hexaconazole·kg) soil. The ability to detoxify hexaconazole, colonize plant tissues, secrete PGP bioactive molecules even under fungicide pressure and its unique ability to diminish oxidative stress make B.japonicum an attractive choice for remediation of fungicide polluted soils and to concurrently enhance greengram production under stressed environment.

关键词： Hexaconazole toxicity Greengram Bradyrhizobium japonicum Cellular damage Nodule ultrastructure Oxidative stress

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Applying organic amendment enriches nutrient status of municipal solid waste compost and its application enhances tuber yield and nutrient concentrations of potato

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Waste Disposal and Sustainable Energy 2023年第4期5卷 439-450页

作者： Marufa Sultana M.Jahiruddin Mohammad Golam Kibria Md Hosenuzzaman Md.Anwarul Abedin Department of Soil Science Faculty of AgricultureBangladesh Agricultural UniversityMymensingh2202Bangladesh Bangladesh agricultural Research Institute JoydebpurBangladesh

Elevated price of chemical fertilizers and poor nutrient content in conventional organic sources such as municipal solid waste(MSW)compost necessitate the production of nutrient enriched compost which could serve as a potential alternative organic fertilizer option.We studied three types of amended compost that were prepared by mixing 20%mustard oil cake(MOC)and 30%poultry manure(PM)or cow dung or sugarcane press mud(SPM)with 50%MSW compost.Trichoderma viride was inoculated into every type of compost.The rate of amended or unamended MSW compost application was 10 t ha^(−1).The use of different amendments improved the nutrient level of MSW compost,of which the N increment was remarkable,ranging from 1.14%N(unamended compost)to 2.9%–3.22%N depending on the types of amendment.A field experiment was conducted to evaluate performances of the amended MSW composts on the yield and nutrient content of potato(variety BARI Alu25).All compost treatments except the sole MSW compost treatment produced significantly higher tuber yields than the sole fertilizer treatment.The press mud based MSW compost+fertilizer treatment produced the highest tuber yield of 31.6 t ha^(−1)(65%increase over 100%fertilizers and 57%increase over 100%compost treatment).The tuber N concentration varied from 0.128%to 0.594%,P from 0.018%to 0.035%,K from 0.213%to 0.313%and S from 0.020%to 0.053%,with the highest result recorded with press mud+fertilizer treatment.The use of amended composts had residual effects on soil N,P,K and S contents.Thus,the treatment containing 50%fertilizer+50%compost mixture(MSW:MOC:SPM in a ratio of 5:2:3)performed the best followed by PM amended compost.It is concluded that integrated use of 10 t ha^(−1) organic amended MSW compost with chemical fertilizers can ensure higher crop yield,nutrient content and sustained soil fertility in nutrient-deficient sub-tropical soil.

关键词： Mustard oil cake MSW compost Potato Poultry manure Sugarcane press mud

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Ocular therapies for neuronal ceroid lipofuscinoses: more than meets the eye

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Neural Regeneration Research 2022年第8期17卷 1755-1756页

作者： Samantha J.Murray Nadia L.Mitchell Faculty of Agricultural and Life Sciences Lincoln UniversityLincolnNew Zealand

The neuronal ceroid lipofuscinoses(NCLs),also known as Batten disease,are a group of inherited,neurodegenerative,lysosomal storage diseases typically manifesting in childhood.There are currently 13 known forms of NCL resulting from various mutations in the CLN(ceroid lipofuscinoses neuronal)genes(CLN1-8 and CLN10-14).Although varying in onset and severity,the NCLs share several phenotypic features including seizures,motor dysfunction,cognitive decline,and progressive loss of vision(Mole et al.,2011).Current treatment strategies being investigated in pre-clinical studies and early stage clinical trials primarily target the brain and spinal cord.While these potential therapeutics show promise in attenuating neurological disease,protection against retinal dysfunction and degeneration is generally ineffective or not reported.

关键词： degeneration primarily typically

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A preliminary study of the effects of plastic film-mulched raised beds on soil temperature and crop performance of early-sown short-season spring maize(Zea mays L.) in the North China Plain

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The Crop Journal 2016年第4期4卷 331-337页

作者： Jing Dang Weili Liang Guiyan Wang Pengfei Shi Dan Wu faculty of Agronomy Agricultural University of Hebei

To identify a strategy for earlier sowing and harvesting of spring maize(Zea mays L.) in an alternative maize–maize double cropping system, a 2-year field experiment was performed at Quzhou experimental station of China agricultural University in 2014 and 2015. A short-season cultivar, Demeiya number 1(KX7349), was used in the experiment. Soil temperature to 5 cm depth in the early crop growth stage, crop growth, crop yield, and water use of different treatments(plastic film-mulched raised bed(RF) and flat field without plastic film mulching(CK) in 2014; RF, plastic film-mulched flat field(FF), and CK in 2015)were measured or calculated and compared. Soil temperature in the film-mulched treatments was consistently higher than that in CK(1.6–3.5 °C in average) during the early growth stage. Crops in plastic film-mulched treatments used 214 fewer growing-degree days(GDDs) in 2014 and 262 fewer GDDs in 2015. In 2014, the RF treatment yielded 32.7%higher biomass than CK, although its 9.4% higher grain yield was not statistically significant. Also, RF used 17.9% less water and showed 33.1% higher water use efficiency(WUE) than CK. In 2015, RF and FF showed 56.2% and 49.5% higher yield, 15.0% and 4.5%lower water use(ET), and 63.4% and 75.7% higher WUE, respectively, than CK. RF markedly increased soil temperature in the early crop season, accelerated crop growth, reduced ET,and greatly increased crop yield and WUE. Compared with FF, RF had no obvious effect on crop growth rate, although soil temperature during the period between sowing and stem elongation was slightly increased. However, RF resulted in lower ET and higher WUE than FF. Effects of RF on soil water dynamics as well as its cost-effectiveness remain topics for further study.

关键词： Raised bed Film mulch Spring Short-season Maize North China Plain

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Effect of modified atmosphere packaging on the mechanical properties of lettuce during shelf life in cold storage

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Information Processing in Agriculture 2021年第4期8卷 485-493页

作者： Mahmoud Soltani Firouz Reza Alimardani Hossein Mobli Seyed Saeid Mohtasebi Department of agricultural Machinery Engineering Faculty of Agricultural Engineering and TechnologyUniversity of TehranKarajIran

Lettuce is a perishable vegetable that its shelf life is limited by detrimental texture changes and enzymatic activities during postharvest storage.One of solutions that can be used in storage and distribution of this product is modified atmosphere packaging(MAP).But its effects on the mechanical properties of the product have not been studied.This information would be beneficial in inspection of eating quality and later processing such as cutting and shredding.This research aimed to study effect of active MAP technology on the postharvest mechanical properties of lettuce at different storage periods.It was found that MAP had a significant effect on the tension property of the lettuce leaf.MAP treatment preserved the brittleness of the specimens during storage,but the control ones lost their brittleness and tolerated greater tension.Stiffness and rupture energy were significantly affected by MAP with P values of 0.01 and 0.05,respectively.Also,stiffness of the MAPtreated samples was higher than the control at the same storage time.The findings are due to reducing respiration,transpiration and bacterial growth by MAP which delays nutrient decomposition and maintains the original color and texture.

关键词： Lettuce Modified Atmosphere Packaging (MAP) Postharvest Quality

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Impact of lactic acid bacteria on the control of Listeria monocytogenes in ready-to-eat foods

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Food Quality and Safety 2022年第3期6卷 375-385页

作者： Laura Webb Luyao Ma Xiaonan Lu Department of Food Science and agricultural Chemistry Faculty of Agricultural and Environmental SciencesMcGill UniversitySainte-Anne de-BellevueQcCanada

Due to the increased demand for ready-to-eat(RTE)minimally processed foods,alternatives to chemical and thermal preservation methods to maintain food safety are highly demanded.A significant safety hazard in RTE food products is the growth of the foodborne pathogen Listeria monocytogenes(L.monocytogenes).After processing,recontamination or cross-contamination of L.monocytogenes in RTE food products may occur and the lack of cooking can lead to an increased risk of listeriosis.Further,some RTE food products(e.***.cheese and cured meat)can have a long processing period and shelf life,thus allowing for the growth and proliferation of L.monocytogenes in the food matrix.Lactic acid bacteria(LAB)are generally recognized as safe probiotics and have been proposed as a biological control approach to eliminate foodborne pathogens including L.monocytogenes.LAB have been reported to extend the shelf life of food products and inhibit pathogen proliferation via growth competition and metabolite production.LAB are native microflora of many RTE foods,but only certain LAB may inhibit pathogen growth.Therefore,the specificity of LAB species should be employed in their use in RTE foods.This review will discuss the antimicrobial mechanisms of LAB against L.monocytogenes,selective use of LAB in food matrices,and their uses in food processing and packaging.

关键词： Ready-to-eat food products lactic acid bacteria Listeria monocytogenes food safety

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Tree growth performance and estimation of wood quality in plantation trials for Maesopsis eminii and Shorea spp.

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Journal of Forestry Research 2018年第4期29卷 1144-1153页

作者： Lina Karlinasari Suhada Andini Descarlo Worabai Prijanto Pamungkas Sri Wilarso Budi Iskandar Z.Siregar Department of Forest Products Faculty of ForestryBogor Agricultural University(IPB) Alumnus Department of Silviculture Faculty of ForestryBogor Agricultural University(IPB) Department of Silviculture Faculty of ForestryBogor Agricultural University(IPB)

Plantations of tropical species axe becoming an increasingly important source of wood. However, it is important that research trials focus not only on tree growth performance, but also on wood quality. The aims of this study were to assess the growth performance of six commercially and ecologically important tree species from separate plantation trials in Indonesia and to determine the relationships between tree growth and wood quality in terms of the dynamic modulus of elasticity （MOE） and wood density. Forty-eight 7-year Maesopsis eminii Engl. and thirty-five 9-year specimens （7 each of 5 Shorea spp.） were selected from two trials. The MOE, based on acoustic velocity, was indirectly measured to evaluate wood stiffness. Tree-growth performance was evaluated, and correlations between growth traits and acoustic velocity as well as density and wood stiffness properties were estimated. The growth performance of M. eminii in terms of tree volume was significantly different in three different cate- gories of growth （i.e. fast, medium, slow）. Of the five Shorea spp. studied, Shorea leprosula Miq. had the highest growth rate, as expected since it is known to be a fastgrowing Shorea species. Indirect measurement of wood quality by means of non-destructive ultrasonic methods showed a weak negative correlation between tree volume and acoustic velocity and dynamic MOE. Although each fast-growing tree could reach a merchantable size faster than other varieties or species, wood traits of various species tested were not significantly different based on tree growth rate performance. The findings from this study could be used to improve selection criteria in future breeding trials; indirect measurements of the dynamic modulus of elasticity can be used in mass pre-selection of genetic materials, to choose the most-promising material for in-depth evaluation.

关键词： Dynamic MOE Non-destructive test Selection criteria Tree growth Wood quality Maesopsiseminii Shorea spp

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RPA-Assisted Cas12a System for Detecting Pathogenic Xanthomonas oryzae,a Causative Agent for Bacterial Leaf Blight Disease in Rice

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Rice science 2022年第4期29卷 340-352页

作者： Kittisak BUDDHACHAT Nattaporn SRIPAIROJ Onchira RITBAMRUNG Phithak INTHIMA Kumrop RATANASUT Thanita BOONSRANGSOM Tepsuda RUNGRAT Pongsanat PONGCHAROEN Kawee SUJIPULI Department of Biology Faculty of ScienceNaresuan UniversityPhitsanulok 65000Thailand Center of Excellence in Research for agricultural Biotechnology Department of Agricultural ScienceFaculty of AgricultureNatural Resources and EnvironmentNaresuan UniversityPhitsanulok 65000Thailand Department of agricultural Science Faculty of AgricultureNatural Resources and EnvironmentNaresuan UniversityPhitsanulok 65000Thailand

Xanthomonas oryzae pv.oryzae(Xoo)is a widespread pathogen causing bacterial leaf blight(BLB)disease,devastating rice productivity in many cultivated areas of Thailand.A specific and simple method for Xoo detection is required to improve surveillance of disease transmission and outbreak.This study developed a recombinase polymerase amplification(RPA)assay assisted with CRISPR-cas12a assay(RAC)for Xoo detection from bacterial cell suspension of infected rice samples without DNA extraction.The efficiency of the RAC system for Xoo detection using either Xoo80 or Xoo4009 locus was optimized to amplify and determine the sensitivity and specificity using a Xoo DNA template from bacterial cell suspension of infected rice samples without DNA extraction.The RAC system using the Xoo4009 locus gave a higher specificity than Xoo80 locus,because only Xoo species was amplified positive RPA product with fluorescence signal by cas12a digestion,which indicated no cross reactivity.Optimal RAC using the Xoo4009 locus enabled diagnosis of Xoo presence from both plant extracted samples of Xoo artificially inoculated rice leaves within 3 d post-inoculation without symptomatic BLB appearance,and Xoo naturally infected rice.Findings exhibited that RAC using the Xoo4009 locus offered sensitivity,specificity and simplicity for Xoo detection,with low intensities of Xoo-DNA(1×10^(3) copies/μL)and Xoo-cell(2.5×10^(3) cfu/mL).This developed RAC system showed significantly potential for Xoo detection at point-of-care application for early signs of BLB disease outbreak in rice fields.

关键词： bacterial leaf blight CRISPR-cas12a recombinase polymerase amplification rice

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Understanding association between methylene blue dye and biosorbent: Palmyrah sprout casing in adsorption process in aqueous phase

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Water Science and Engineering 2023年第2期16卷 154-164页

作者： D.M.N.H.Jayasuriya Kannan Nadarajah Department of agricultural Engineering Faculty of AgricultureUniversity of JaffnaAriviyal NagarKilinochchi 44000Sri Lanka

Water pollution caused by industrial dyes has become a severe problem in the modern world. Biosorbents can be used in an eco-friendly manner to remove industrial dyes. In this study, five biosorbents were selected: palmyrah sprout casing (PSC), manioc peel, lime peel, king coconut husk, and coconut kernel. Batch adsorption experiments were conducted to identify the best biosorbent with the highest ability to adsorb methylene blue (MB) from wastewater. The detailed mechanisms of PSC used in the adsorptive removal of MB in aqueous phase were investigated. Of the five biosorbents, PSC exhibited the best removal performance with an adsorption capacity at equilibrium (qe) of 27.67 mg/g. The qe values of lime peel, king coconut husk, manioc peel, and coconut kernel were 24.25 mg/g, 15.29 mg/g, 10.84 mg/g, and 7.06 mg/g, respectively. To explain the mechanisms of MB adsorption with the selected biosorbents, the Fourier transform infrared (FTIR) spectrometry and X-ray diffraction (XRD) analyses were performed to characterize functional properties, and isotherm, kinetic, rate-limiting, and thermodynamic analyses were conducted. The FTIR analysis revealed that different biosorbents had different functional properties on their adsorptive surfaces. The FTIR and XRD results obtained before and after MB adsorption with PSC indicated that the surface functional groups of carbonyl and hydroxyl actively participated in the removal process. According to the isotherm analysis, monolayer adsorption was observed with the Langmuir model with a determination coefficient of 0.998. The duration to reach the maximum adsorption capacity for MB adsorption with PSC was 120 min, and the adsorption process was exothermic due to the negative enthalpy change (-9.950 kJ/mol). Moreover, the boundary layer thickness and intraparticle diffusion were the rate-limiting factors in the adsorption process. As a new biosorbent for MB adsorption, PSC could be used in activated carbon production to enhance the performance of dye removal.

关键词： Biosorbents Isotherm Kinetics Methylene blue Rate-limiting factor Thermodynamics

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Chemical characteristics changes associated with extracted protein and salt addition and effect of different additives in the curing process on sensory acceptance of liquid fermented fish from tilapia frame

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Aquaculture and Fisheries 2022年第4期7卷 405-410页

作者： Yanawirut Wijitpun Piyanan Chomnawang Kannika Huaisan Kaewta Sootsuwan Channarong Chomnawang Department of Food Technology Faculty of Agricultural TechnologyKalasin UniversityKalasin46000Thailand Department of Biotechnology Faculty of Agricultural TechnologyKalasin UniversityKalasin46000Thailand

Liquid fermented fish(Nam pla ra)is a traditional local condiment and popular consumption in Thailand.According to previous research,tilapia frame could be used as a raw material for the production,but the amount of protein received is still below the standard.In addition,there is no information of additives in curing process on consumer preferences.In this research,response surface methodology was used to study the influence of extracted protein from soybean meal(5-15%)and salt(15-20%)contents on chemical characteristics of Nam pla ra after 4 months of fermentation.The amount of roasted rice and roasted rice bran addition in curing process on sensory preferences were also studied.The results showed the linear effect of extracted protein and salt contents on NaCl content(P<0.05).When extracted protein increased,NaCl content of sample decreased,while increased salt concentration,NaCl content increased.Extracted protein showed linear relationship with autolytic degradation products and formaldehyde nitrogen of sample(P<0.05).Increase in extracted protein concentration caused an increment to both autolytic degradation products and formaldehyde nitrogen.In addition,salt content showed linear relationship with protein,total nitrogen,ammonia nitrogen and amino nitrogen(P<0.05).When increased salt concentration,protein and all kind of nitrogen tested in this study decreased.The statistical models for protein and NaCl contents(as an index of product quality)and our experimental validation,indicated that the models were appropriate to predict values.For acceptability test,there was no significant different in all attributes scores of cured samples with 10%roasted rice,roasted rice bran and mixture of both.In addition,their showed a significant different in all attributes scores lower than the commercial sample.In conclusion,the highest protein content was found in a treatment prepared by added salt content 15%by weight of digested material.Addition of proteins extracted from soybean meal did not lead to increase in protei

关键词： Liquid fermented fish(Nam pla ra) Tilapia frame Fermentation Extracted soybean protein

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