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作物学报 2021年第1期47卷 42-49页

作者：孙倩邹枚伶张辰笈江思容 Eder Jorge de Oliveira 张圣奎夏志强王文泉李有志广西大学生命科学与技术学院/亚热带农业生物资源保护与利用国家重点实验室广西南宁530004 中国热带农业科学院热带生物技术研究所海南海口571101 中国热带农业科学院热带生物组学大数据中心海南海口571101 海南大学海南海口570203 南京农业大学江苏南京210095 embrapa Mandioca e Fruticultura Cruz das AlmasBahia 44380-000Brazil 齐鲁工业大学山东济南250306

为了对巴西木薯种质资源进行遗传多样性、亲缘关系和群体遗传结构分析,本研究利用了7946个SNPs和1997个InDels分子标记,通过ADMIXTURE软件进行群体结构分析、GCTA软件进行主成分分析。结果显示,巴西木薯被划分为9个亚群。这与利用PHYLI... 详细信息

为了对巴西木薯种质资源进行遗传多样性、亲缘关系和群体遗传结构分析,本研究利用了7946个SNPs和1997个InDels分子标记,通过ADMIXTURE软件进行群体结构分析、GCTA软件进行主成分分析。结果显示,巴西木薯被划分为9个亚群。这与利用PHYLIP进行的聚类分析结果大概一致,其中亚群1、亚群2、亚群4、亚群6和亚群8能较好地分别聚在一起,而其他亚群中的样品大致能聚在一起,且样品间有一定的交叉。巴西木薯种质资源遗传多样性指数(0.274)高于中国、尼日利亚等,其中巴西木薯亚群5具有相对较高的遗传多样性水平(0.29)。巴西木薯各亚群的群体遗传分化程度较低(群体分化指数在0.03~0.15之间),但高于中国木薯种质资源的群体分化指数。各木薯材料间的遗传距离变幅为0.084~0.297,平均遗传距离为0.228。本研究结果可为后续关联分析发掘优良等位基因及引种提供依据。

关键词：木薯 SNP InDel 遗传多样性群体结构

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Biomonitoring the <i>Vitex gardneriana</i>Shauer (Lamiaceae) Toxic Effects to Shed Light on Bioactive Compounds against a Major Coconut Pest Mite

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American Journal of Plant Sciences 2021年第11期12卷 1601-1612页

作者： Anderson Soares de Almeida Caroline Rabelo Coelho Mirele Santana de Sá Edson de Souza Bento Alberto Wisniewski Junior Adenir Vieira Teodoro Haroudo Sátiro Xavier Jose Guedes de Sena Filho Departamento de Farmácia Universidade Federal de Sergipe Cidade Universitária Professor José Aloísio de Campos Avenida Mare-chal Rondon s/n Bairro Jardim Rosa Elze S&#227 o Cristóvã o Brazil Universidade Estadual do Maranhã o Cidade Universitária Paulo VI s/n Bairro Tirirical S&#227 o Luís Brazil Petroleum and Energy from Biomass Research Group (PEB) Department of Chemistry Federal University of Sergipe S&#227 o Cristóvã o Brazil Instituto de Química e Biotecnologia Universidade Federal de Alagoas Cidade Universitária Campus Aristóteles Calazans Sim&#245 es Avenida Lourival Melo Mota s/n Bairro Tabuleiro do Martins Maceió Brazil embrapa Tabuleiros Costeiros Bairro Jardins Aracaju Brazil Departamento de Ciências Farmacêuticas Universidade Federal de Pernambuco Cidade universitária Recife Brazil

The coconut mite, Aceria guerreronis Keifer (Acari: Eriophyidae), is a major pest of coconut plantations (Cocos nucifera L.) worldwide. Here, we conducted a bioguided phytochemical approach using toxicity and repellency bioassays of nonpolar extract and its fractions of Vitex gardneriana Schauer (Lamiaceae) leaves to this pest. Nonpolar crude extract was fractionated by column chromatography using solvents with increased polarity and binary mixtures, resulting in five semipurified groups. The biomonitoring bioassay provided active fractions and led to the isolation and characterization of the bioactive compound squalene, a biosynthetic precursor of 20-hydroxyecdysone, which plays an important role in plant defense against arthropods. The LC50 of the crude extract of V. gardneriana for A. guerreronis was estimated to be 0.185 mg·mL-1 and LC80 = 4.123 mg·mL-1. Also, the extract was highly repellent to this pest for up to 24 h. The fractions of V. gardneriana, and also squalene, caused mortality to A. guerreronis. The potential of V. gardneriana fractions/squalene as biopesticides for controlling A. guerreronis in coconut plantations is discussed herein.

关键词： Bioassay Toxicity Phytochemistry Terpene Biopesticides Biorational Control

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Genetic advancements and future directions in ruminant livestock breeding: from reference genomes to multiomics innovations

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Science China Life Sciences 2024年

作者： Songsong Xu Zhanerke Akhatayeva Jiaxin Liu Xueyan Feng Yi Yu Bouabid Badaoui Ali Esmailizadeh Juha Kantanen Marcel Amills Johannes A. Lenstra Anna M. Johansson David W. Coltman George E. Liu Ino Curik Pablo Orozco-terWengel Samuel R. Paiva Natalia A. Zinovieva Linwei Zhang Ji Yang Zhihong Liu Yachun Wang Ying Yu Menghua Li Faculty of Veterinary Medicine Utrecht University Department of Animal Breeding and Genetics Faculty of Veterinary Medicine and Animal Science Swedish University of Agricultural Sciences Department of Biological Sciences University of Alberta Edmonton Department of Biology Western University Animal Genomics and Improvement Laboratory BARC USDA-ARS Department of Animal Science Faculty of Agriculture University of Zagreb Institute of Animal Sciences Hungarian University of Agriculture and Life Sciences (MATE) School of Biosciences Cardiff University embrapa Genetic Resources and Biotechnology Laboratory of Animal Genetics L.K. Ernst Federal Science Center for Animal Husbandry Moscow Region Frontiers Science Center for Molecular Design Breeding (MOE) Department of Neurology China-Japan Friendship Hospital College of Animal Science Inner Mongolia Agricultural University Sanya Institute of China Agricultural University State Key Laboratory of Animal Biotech Breeding College of Animal Science and Technology China Agricultural University Institute of Grassland Research Chinese Academy of Agricultural Sciences Laboratory of Biodiversity Ecology and Genome Department of Biology Faculty of Sciences Rabat Mohammed V University Department of Animal Science Faculty of Agriculture Shahid Bahonar University of Kerman Production Systems Natural Resources Institute Finland (Luke) Department of Animal Genetics Center for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB Campus de la Universitat Autònoma de Barcelona Departament de Ciència Animal i dels Aliments Universitat Autònoma de Barcelona

Ruminant livestock provide a rich source of products, such as meat, milk, and wool, and play a critical role in global food security and nutrition. Over the past few decades, genomic studies of ruminant livestock have provided valuable insights into their domestication and the genetic basis of economically important traits, facilitating the breeding of elite varieties. In this review, we summarize the main advancements for domestic ruminants in reference genome assemblies, population genomics, and the identification of functional genes or variants for phenotypic traits. These traits include meat and carcass quality, reproduction, milk production, feed efficiency, wool and cashmere yield,horn development, tail type, coat color, environmental adaptation, and disease resistance. Functional genomic research is entering a new era with the advancements of graphical pangenomics and telomere-to-telomere(T2T) gap-free genome assembly. These advancements promise to improve our understanding of domestication and the molecular mechanisms underlying economically important traits in ruminant livestock. Finally, we provide new perspectives and future directions for genomic research on ruminant genomes. We suggest how ever-increasing multiomics datasets will facilitate future studies and molecular breeding in livestock, including the potential to uncover novel genetic mechanisms underlying phenotypic traits, to enable more accurate genomic prediction models, and to accelerate genetic improvement programs.

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Mobilizing Crop Biodiversity

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Molecular Plant 2020年第10期13卷 1341-1344页

作者： Susan McCouch Zahra Katy Navabi Michael Abberton Noelle L.Anglin Rosa Lia Barbieri Michael Baum Kirstin Bett Helen Booker Gerald L.Brown Glenn J.Bryan Luigi Cattivelli David Charest Kellye Eversole Marcelo Freitas Kioumars Ghamkhar Dario Grattipaglia Robert Henry Maria Cleria Valadares Inglis Tofazzal Islam Zakaria Kehel Paul J.Kersey Graham J.King Stephen Kresovich Emily Marden Sean Mayes Marie Noelle Ndjiondjiop Henry T.Nguyen Samuel Rezende Paiva Roberto Papa Peter W.B.Phillips Awais Rasheed Christopher Richards Mathieu Flouard Maria Jose Amstalden Sampaio Uwe Scholz Paul D.Shaw Brad Sherman S.Evan Staton Nils Stein Jan Svensson Mark Tester Jose Francisco Montenegro Valls Rajeev Varshney Stephen Visscher Eric von Wettberg Robbie Waugh Peter Wenzl Loren H.Rieseberg Plant Breeding and Genetics School of Integrated Plant SciencesCornell UniversityIthacaNY14853USA DivSeek Global Institute for Food Security110 Gymnasium PlaceUniversity of SaskatchewanSaskatoonSKS7N 0W9Canada lnternational Institute of Tropical Agriculture(IITA) PMB 5320Oyo RdIbadanNigeria International Potato Center(CIP)1895 Avenida La Molina Lima Peru 12Lima 15023Peru embrapa Genetic Resources and Biotechnology Parque Estacjao BiologicaFinal Av W5 NorteCaixa Postal 0237270770-917-Brasilia DFBrazil International Center for Agricultural Research in the Dry Areas(I CAR DA) Station Exp.INRA-Quich.Rue Hafiane Cherkaoui.Agdal.Rabat-Instituts10111RabatMorocco Department of Plant Sciences University of Saskatchewan51 Campus Dr.SaskatoonSK S7N 5A8Canada Department of Plant Agriculture University of GuelphRm 316Crop Science Bldg50 Stone Rd EGuelphON N1G 2W1Canada Genome Prairie 111 Research DriveSuite 101SaskatoonSKS7N 3R2Canada The James Hutt on Institute Errol RoadInvergowrieDundeeDD25DAUK CREA Research Centre for Genomics and Bioinformaticsvia San Protaso 302Fiorenzuola d'Arda29017Italy Genome British Columbia 400-575 West 8th AvenueVancouverBCV5Z 0C4Canada International Wheat Genome Sequencing Consortium 2841 NE Marywood CtLee's SummitMO.64086USA Forage Science Grasslands Research CentreAgResearchPalmerston North4410New Zealand Queensla nd Alliance for Agriculture and Food Inn ovation University of QueenslandBrisbaneQLD 4072Australia Institute of Biotechnology and Genetic Engineering(IBGE) Bangabandhu Sheikh Mujibur Rahman Agricultural UniversityGazipur 1706Bangladesh Southern Cross University PO Box 157LismoreNSW 2480Australia Royal Botanic Gardens KewRichmondSurreyTW93AEUK Feed the Future Innovation Lab for Crop Improvement 431 Weill HallCornell UniversityIthacaNY14853USA Department of Botany and Biodiversity Research Centre University of British ColumbiaVancouverBC V6R 2A5Canada Crops For the Future(UK)CIC 76-80 Baddow Road ChelmsfordEs

Over the past 70 years,the world has witnessed extraordinary growth in crop productivity,enabled by a suite of technological advances,including higher yielding crop varieties,improved farm management,synthetic agrochemicals,and agricultural *** this"Green Revolution"intensified crop production,and is credited with reducing famine and malnutrition,its benefits were accompanied by several undesirable collateral effects(Pingali,2012).These include a narrowing of agricultural biodiversity,stemming from increased monoculture and greater reliance on a smaller number of crops and crop varieties for the majority of our *** reduction in diversity has created vulnerabilities to pest and disease epidemics,climate variation,and ultimately to human health(Harlan,1972).

关键词： intensified crops agricultural

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