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Development and parentage analysis of SNP markers for Chestnut-vented Nuthatch(Sitta nagaensis)based on ddRAD-seq data

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Avian Research 2024年第2期15卷 271-278页

作者： Qingmiao Yuan Xi Lu Ruixin Mo Xianyin Xu Xu Luo Yubao Duan Key Laboratory for Conserving Wildlife with Small populations in Yunnan Southwest Forestry UniversityKunming 650224China Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China Ministry of EducationSouthwest Forestry UniversityKunming 650224China Key Laboratory of Forest Disaster Warning and Control of Yunnan Province Southwest Forestry UniversityKunming 650224China College of Forestry Southwest Forestry UniversityKunming 650224China Administration of Zixi Mountain Provincial Nature Reserve Chuxiong 675008China

Extra-pair paternity(EPP)is commonly found in socially monogamous birds,especially in small passerine birds,and there are interspecific and intraspecific variations in the extent of *** Chestnut-vented Nuthatch(Sitta nagaensis)is a socially monogamous passerine bird,and verifying whether this species has EPP relies on parentage *** is not known to have *** this study,we developed SNP markers of this species that are informative for parentage analysis from double digest restriction site-associated DNA sequencing(ddRAD-seq)data.A panel consisting of 50 SNP markers,with a mean heterozygosity of 0.343,was used to resolve 95% of nestlings to *** combined exclusion probabilities for the first parent and second parent were 0.991 and 0.9999,*** panel of SNP markers is a powerful tool for parentage assignments in *** addition,we found that three offspring(7.9%)from three nests(23.1%)were the result of extra-pair fertilization out of 38 offspring in 13 *** study provided information on parentage analysis that has not been reported before in *** also supplemented the understudied EPP behavior of birds in Asia,contributing to a general understanding of the EPP behaviors of birds.

关键词： Chestnut-vented Nuthatch ddRAD sequencing Extra-pair paternity Parentage analysis SNPs

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Role of climatic variability in shaping intraspecific variation of thermal tolerance in Mediterranean water beetles

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Insect Science 2024年第1期31卷 285-298页

作者： Susana Pallarés David Garoffolo Belén Rodríguez David Sánchez-Fernández department of Zoology University of SevilleSevilleSpain Faculty of Biology Department of Ecology and HydrologyUniversity of MurciaCampus EspinardoMurciaSpain

The climatic variability hypothesis(CVH)predicts that organisms in more thermally variable environments have wider thermal breadths and higher thermal plasticity than those from more stable ***,due to evolutionary trade-offs,taxa with greater absolute thermal limits may have little plasticity of such limits(trade-off hypothesis).The CVH assumes that climatic variability is the ultimate driver of thermal tolerance variation across latitudinal and altitudinal gradients,but average temperature also varies along such *** explored intraspecific variation of thermal tolerance in three typical Mediterranean saline water beetles(families Hydrophilidae and Dytiscidae).For each species,we compared two populations where the species coexist,with similar annual mean temperature but contrasting thermal variability(continental *** population).We estimated thermal limits of adults from each population,previously acclimated at 17,20,or 25℃.We found species-specific patterns but overall,our results agree with the CVH regarding thermal ranges,which were wider in the continental(more variable)*** the two hydrophilid species,this came at the cost of losing plasticity of the upper thermal limit in this population,supporting the trade-off hypothesis,but not in the dytiscid *** results support the role of local adaptation to thermal variability and trade-offs between basal tolerance and physiological plasticity in shaping thermal tolerance in aquatic ectotherms,but also suggest that intraspecific variation of thermal tolerance does not fit a general pattern among aquatic *** such intraspecific variation could lead to inaccurate predictions of the vulnerability of aquatic insects to global warming.

关键词： acclimation capacity aquatic insects climate change heat coma temperature supercooling point thermal plasticity

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Metabolomic evidence of independent biotransformation pathways for terpenes in two specialist mammalian herbivores (genus Neotoma)

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Integrative Zoology 2024年第1期19卷 143-155页

作者： Katharina SCHRAMM Michele SKOPEC Denise DEARING department of Biology University of UtahSalt Lake CityUtahUSA department of Zoology Weber State UniversityOgdenUtahUSA

Herbivory is common in mammals,yet our understanding of detoxification processes used by mammals to biotrans-form plant secondary compounds(PSCs)is *** herbivores are thought to have evolved detoxifica-tion mechanisms that rely more heavily on energetically cheap Phase I biotransformation reactions to process high levels of PSCs in their *** explored this hypothesis by comparing the urinary metabolite patterns of two spe-cialist herbivores(genus Neotoma).Neotoma stephensi is an obligate specialist on one-seeded juniper(Juniperus monosperma).Neotoma lepida is a generalist forager across its range,yet populations in the Great Basin specialize on Utah juniper(***).While both juniper species have high levels of terpenes,the terpene profiles and quantities differ between the *** from both woodrat species were fed diets of each juniper in a cross-over ***,collected over a 24-h period,was extracted and analyzed in an untargeted metabolomics approach using both GC-MS and HPLC-MS/*** obligate specialist *** excreted a unique pattern of Phase I metabolites when fed its native juniper,while *** excreted a unique pattern of Phase II metabolites when fed its native *** woodrat species utilized the Phase II metabolic pathway of glucuronidation more heavily when consuming the more chemically diverse ***,and *** utilized less glucuronida-tion than *** when consuming *** results are consistent with the hypothesis that obligate specialists may have evolved unique and efficient biotransformation mechanisms for dealing with PSCs in their diet.

关键词： dietary specialization herbivory juniper metabolomics Neotoma

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Cell-type resolved transcriptomic approaches for dissecting selective vulnerability in neurodgeneration

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Neural Regeneration Research 2024年第7期19卷 1411-1413页

作者： Caleb A.Wood Nicholas M.Tran department of Neuroscience Baylor College of MedicineHoustonTXUSA department of Molecular and Human Genetics Baylor College of MedicineHoustonTXUSA

A common feature among neurodegenerative conditions is that ce rtain neuronal populations are selectively vulnerable to loss(Fu et al.,2018).By corollary,other neurons are selectively resilient,suggesting they may possess unique features that support their survival.U nderstanding the basis of neuronal resilience or vulnerability would provide a logical strategy to identify factors that could be targeted therapeutically.

关键词： selective targeted

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A Hybrid SIR-Fuzzy Model for Epidemic Dynamics:A Numerical Study

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Computer Modeling in Engineering & Sciences 2024年第6期139卷 3417-3434页

作者： Muhammad Shoaib Arif Kamaleldin Abodayeh Yasir Nawaz department of Mathematics and Sciences College of Humanities and SciencesPrince Sultan UniversityRiyadh11586Saudi Arabia department of Mathematics Air UniversityIslamabad44000Pakistan

This study focuses on the urgent requirement for improved accuracy in diseasemodeling by introducing a newcomputational framework called the Hybrid SIR-Fuzzy *** integrating the traditional Susceptible-Infectious-Recovered(SIR)modelwith fuzzy logic,ourmethod effectively addresses the complex nature of epidemic dynamics by accurately accounting for uncertainties and imprecisions in both data and model *** main aim of this research is to provide a model for disease transmission using fuzzy theory,which can successfully address uncertainty in mathematical *** main emphasis is on the imprecise transmission rate parameter,utilizing a three-part description of its membership *** enhances the representation of disease processes with greater complexity and tackles the difficulties related to quantifying uncertainty in mathematical *** investigate equilibrium points for three separate scenarios and perform a comprehensive sensitivity analysis,providing insight into the complex correlation betweenmodel parameters and epidemic *** order to facilitate a quantitative analysis of the fuzzy model,we propose the implementation of a resilient numerical *** convergence study of the scheme demonstrates its trustworthiness,providing a conditionally positive solution,which represents a significant improvement compared to current forward Euler *** numerical findings demonstrate themodel’s effectiveness in accurately representing the dynamics of disease ***,when the mortality coefficient rises,both the susceptible and infected populations decrease,highlighting the model’s sensitivity to important epidemiological ***,there is a direct relationship between higher Holling type rate values and a decrease in the number of individuals who are infected,as well as an increase in the number of susceptible *** correlation offers a significant understanding of how many elements affect the con

关键词： Fuzzy-based model sensitivity equilibriumpoints proposed numerical scheme convergence and stability analysis

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Habitat preferences and nest site selection by sympatric populations of Middle Spotted Woodpecker(Dendrocoptes medius) and Syrian Woodpecker(Dendrocopos syriacus) in natural mountain forests of Southwest Iran

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Avian Research 2024年第1期15卷 81-90页

作者： Arya Shafaeipour Jerzy Michalczuk Behzad Fathinia department of Biology Yasouj UniversityYasujIran department of Nature Conservation and Landscape Ecology University of RzeszowZelwerowicza 435-601RzeszowPoland

We examined habitat preferences and nesting requirements of sympatric populations of Middle Spotted Woodpecker(Dendrocoptes medius) and Syrian Woodpecker(Dendrocopos syriacus).We carried out our study in 2015–2018 in natural mountain forests of Southwest *** compared selected features of nesting,territory,and outside territory tree stands of the studied *** Middle Spotted Woodpecker occupied only oak forests,but the Syrian Woodpecker inhabited heterogenic forests that included the preferred tree of this species,the Mount Atlas *** recorded that in the breeding territories of the Middle Spotted Woodpecker,a greater area covered by tree crowns,as well as a larger number of trees,and a larger trunk basal area were observed in comparison to the territories occupied by the more plastic Syrian *** habitat preferences demonstrated by both species could be a result of the selection of tree stands that provide the necessary food resources for each woodpecker *** of Syrian Woodpecker to use heterogenic forest stands including tree species that produce fruits and as Mount Atlas Mastic trees,which likely allowed this species to colonise in Asia and Europe non-forest tree stands as orchards or *** results showed that poor tree condition and large tree trunk dimensions had a positive impact on the selection of nesting sites by both *** presence of trees with large trunk dimensions was associated with multiple years of use of woodpecker breeding sites in the studied *** habitats in suitable condition for both studied woodpeckers can be achieved by preserving natural forests in the mountain regions of Iran.

关键词： Habitat conservation Nesting requirements Primary cavity nesters Species co-occurrence

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The dual role of striatal interneurons: circuit modulation and trophic support for the basal ganglia

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Neural Regeneration Research 2024年第6期19卷 1277-1283页

作者： Elliot Wegman Marlena Wosiski-Kuhn Yu Luo department of Molecular and Cellular Biosciences University of Cincinnati 2. Department of Emergency Medicine at the School of Medicine University of Cincinnati Neuroscience Graduate Program University of Cincinnati

Striatal interneurons play a key role in modulating striatal-dependent behaviors, including motor activity and reward and emotional processing. Interneurons not only provide modulation to the basal ganglia circuitry under homeostasis but are also involved in changes to plasticity and adaptation during disease conditions such as Parkinson’s or Huntington’s disease. This review aims to summarize recent findings regarding the role of striatal cholinergic and GABAergic interneurons in providing circuit modulation to the basal ganglia in both homeostatic and disease conditions. In addition to direct circuit modulation, striatal interneurons have also been shown to provide trophic support to maintain neuron populations in adulthood. We discuss this interesting and novel role of striatal interneurons, with a focus on the maintenance of adult dopaminergic neurons from interneuronderived sonic-hedgehog.

关键词： cholinergic dopamine GABAergic interneuron levodopa-induced dyskinesia parvalbumin sonic hedgehog striatum trophic factor

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Antifertility effects of quinestrol in male lesser bandicoot rat, Bandicota bengalensis, and potential in managing rodent population under field conditions

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Integrative Zoology 2024年第1期19卷 108-126页

作者： Ajooni SIDHU Neena SINGLA department of Zoology Punjab Agricultural UniversityLudhianaPunjabIndia

Integrating fertility control techniques using steroid hormones after lethal control can help reduce post control rebuildup of rodent *** current study is thefirst to assess the antifertility effects of quinestrol in male lesser bandicoot rat,Bandicota bengalensis which is the predominant rodent pest species in Southeast *** in different groups were fed bait containing 0.00%,0.01%,0.02%,and 0.03%quinestrol for 10 days in laboratory and evaluated immediately,and 15,30,and 60 days after treatment discontinuation for effect on reproduction and other antifertility *** of 0.03%quinestrol treatment for 15 days was also observed in managing rodent populations in groundnut *** resulted in average consumption of 19.53±1.80,67.63±5.50,and 246.67±1.78 mg/kg bwt active ingredient by three treated groups of rats,*** reproduction was observed in female rats mated with male rats treated with 0.03%quinestrol,even 30 days after cessation of ***-mortem examination showed a significant(Ppopulations,but long-term studies

关键词： antifertility Bandicota bengalensis field evaluation quinestrol reversibility

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Physiological phenotypes differ among color morphs in introduced common wall lizards(Podarcis muralis)

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Integrative Zoology 2024年第3期19卷 505-523页

作者： Ali AMER Sierra SPEARS Princeton L.VAUGHN Cece COLWELL Ethan H.LIVINGSTON Wyatt MCQUEEN Anna SCHILL Dustin G.REICHARD Eric J.GANGLOFF Kinsey M.BROCK department of Biological Sciences Ohio Wesleyan UniversityDelawareOhioUSA department of Ecology and Evolutionary Biology Princeton UniversityPrincetonNew JerseyUSA department of Biology Idaho State UniversityPocatelloIdahoUSA department of Environmental Science Policyand ManagementCollege of Natural ResourcesUniversity of CaliforniaBerkeleyUSA Museum of Vertebrate Zoology University of CaliforniaBerkeleyUSA

Many species exhibit color polymorphisms which have distinct physiological and behavioral ***,the consistency of morph trait covariation patterns across species,time,and ecological contexts remains *** trait covariation is especially relevant in the context of invasion biology and urban ***,physiological traits pertaining to energy maintenance are crucial to fitness,given their immediate ties to individual reproduction,growth,and population *** investigated the physiological traits of Podarcis muralis,a versatile color polymorphic species that thrives in urban environments(including invasive populations in Ohio,USA).We measured five physiological traits(plasma corticosterone and triglycerides,hematocrit,body condition,and field body temperature),which compose an integrated multivariate *** then tested variation among co-occurring color morphs in the context of establishment in an urban *** found that the traits describing physiological status and strategy shifted across the active season in a morph-dependent manner—the white and yellow morphs exhibited clearly different multivariate physiological phenotypes,characterized primarily by differences in plasma *** suggests that morphs have different strategies in physiological regulation,the flexibility of which is crucial to urban *** white-yellow morph exhibited an intermediate phenotype,suggesting an intermediary energy maintenance *** morphs also exhibited distinct phenotypes,but the low prevalence of this morph in our study populations precludes clear *** work provides insight into how differences among stable polymorphisms exist across axes of the phenotype and how this variation may aid in establishment within novel environments.

关键词： color polymorphism physiological status seasonal variation thermoregulation urban habitat

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Resistance and resilience of soil biological indicators:A case study with multi-walled carbon nanotube

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Pedosphere 2024年第3期34卷 664-675页

作者： Shagufta YASMEEN Nintu MANDAL Anupam DAS Pritam GANGULY Sanjay KUMAR Rajiv RAKSHIT department of Soil Science and Agricultural Chemistry Bihar Agricultural UniversitySabourBhagalpur 813210(India) department of Agronomy Bihar Agricultural UniversitySabourBhagalpur 813210(India)

Soil ecosystem is experiencing stresses due to climate change,and soil inhabitants try to demonstrate their inherent resistance and resilience against those *** of nanomaterials as agricultural inputs could bring shifts in resistance and resilience patterns of soil microbes and associated enzymes,especially under short-term heat *** this background,the impacts of multi-walled carbon nanotube(MWCNT)on the resistance and resilience of soil biological indicators were *** incubation experiment was conducted with varied MWCNT concentrations(0,50,100,250,and 500 mg kg-1soil)for 90 d after 24-h heat stress at 48±2?C to assess the impacts of MWCNT on soil enzyme activities and microbial populations vis-à-vis their resistance and resilience indices under short-term exposure to heat *** activities were reduced after exposure to heat *** indices of enzyme activities were enhanced by MWCNT application on day 1 after heat stress,whereas there was no recovery of enzyme activities after 90-d *** soil enzyme activities,resistance index values of soil microbial populations followed the similar trend and were improved by MWCNT ***-walled carbon nanotube has the potential to improve resistance indices of soil enzyme activities and microbial populations under heat stress,although they could not recover to their original state during periodical incubation after heat *** study helps to understand the relative changes of biological indicators under MWCNT and their ability to withstand heat stress.

关键词： enzyme activity heat stress microbial population nanomaterial recovery

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