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Development and parentage analysis of SNP markers for Chestnut-vented Nuthatch(Sitta nagaensis)based on ddRAD-seq data

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Avian Research 2024年第2期15卷 271-278页

作者： Qingmiao Yuan Xi Lu Ruixin Mo Xianyin Xu Xu Luo Yubao Duan Key Laboratory for Conserving Wildlife with Small Populations in Yunnan Southwest Forestry UniversityKunming 650224China Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China Ministry of EducationSouthwest Forestry UniversityKunming 650224China Key Laboratory of Forest Disaster Warning and Control of Yunnan Province Southwest Forestry UniversityKunming 650224China College of forestry Southwest Forestry UniversityKunming 650224China Administration of Zixi Mountain Provincial Nature Reserve Chuxiong 675008China

Extra-pair paternity(EPP)is commonly found in socially monogamous birds,especially in small passerine birds,and there are interspecific and intraspecific variations in the extent of *** Chestnut-vented Nuthatch(Sitta nagaensis)is a socially monogamous passerine bird,and verifying whether this species has EPP relies on parentage *** is not known to have *** this study,we developed SNP markers of this species that are informative for parentage analysis from double digest restriction site-associated DNA sequencing(ddRAD-seq)data.A panel consisting of 50 SNP markers,with a mean heterozygosity of 0.343,was used to resolve 95% of nestlings to *** combined exclusion probabilities for the first parent and second parent were 0.991 and 0.9999,*** panel of SNP markers is a powerful tool for parentage assignments in *** addition,we found that three offspring(7.9%)from three nests(23.1%)were the result of extra-pair fertilization out of 38 offspring in 13 *** study provided information on parentage analysis that has not been reported before in *** also supplemented the understudied EPP behavior of birds in Asia,contributing to a general understanding of the EPP behaviors of birds.

关键词： Chestnut-vented Nuthatch ddRAD sequencing Extra-pair paternity Parentage analysis SNPs

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Drivers of spatial structure in thinned forests

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Forest Ecosystems 2024年第2期11卷 202-213页

作者： Zichun Wang Yaoxiang Li Guangyu Wang Zheyu Zhang Ya Chen Xiaoli Liu Rundong Peng College of Mechanical and Electrical Engineering Northeast Forestry UniversityHarbin150040China department of Forest Resources Management University of British ColumbiaVancouverCanada

Background:As is widely known,an increasing number of forest areas were managed to preserve and enhance the health of forest ***,previous research on forest management has often overlooked the importance of ***:Our objectives were to define the direction of structure-based forest ***,we investigated the relationships between forest structure and the regeneration,growth,and mortality of trees under different thinning ***,the drivers of forest structural change were ***:On the basis of 92 sites selected from northeastern China,with different recovery time (from 1 to 15years) and different thinning intensities (0–59.9%) since the last *** component analysis (PCA)identified relationships among factors determining forest spatial *** structural equation model (SEM)was used to analyze the driving factors behind the changes in forest spatial structure after ***:Light thinning (0–20%trees removed) promoted forest regeneration,and heavy thinning (over 35% of trees removed) facilitated forest ***,only moderate thinning (20%–35%trees removed) created a reasonable spatial *** dead trees were clustered,and they were hardly affected by thinning ***,thinning intensity,recovery time,and altitude indirectly improve the spatial structure of the forest by influencing diameter at breast height (DBH) and canopy ***:Creating larger DBH and canopy area through thinning will promote the formation of complex forest structures,which cultivates healthy and stable forests.

关键词： Thinning Natural secondary forest Spatial structure Dynamic changes Growth factors Structural equation modeling

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Spatio-temporal variation of water salinity in mangroves revealed by continuous monitoring and its relationship to floristic diversity

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Plant Diversity 2024年第1期46卷 134-143页

作者： Wei Wang Kun Xin Yujun Chen Yuechao Chen Zhongmao Jiang Nong Sheng Baowen Liao Yanmei Xiong Research Institute of Tropical forestry Chinese Academy of ForestryGuangzhou 510520PR China Guangdong Zhanjiang Mangrove National Nature Reserve Administration Zhanjiang 524088PR China

Salinity is among the most critical factors limiting the growth and species distribution of coastal *** salinity in estuarine ecosystems varies temporally and spatially,but the variation patterns across different time scales and salinity fluctuation have rarely been *** effects of salinity on floristic diversity in mangroves are not fully understood due to the temporal and spatial heterogeneity of *** this study,we monitored water salinity at an interval of 10-min over one year in three mangrove catchment areas representing the outer part,middle part,and inner part respectively of Dongzhai Bay,Hainan,*** number of mangrove community types and dominant mangrove species of the three catchment areas were also *** found that the diurnal variation and dry-season intra-month variation in water salinity were driven by tidal *** seasonal variation in water salinity was mainly driven by rainfall with higher salinity occurring in the dry season and lower salinity occurring in the wet ***,water salinity was highest at the outer part,intermediate at the middle part,and lowest at the inner part of the *** intra-month and annual fluctuations of water salinity were highest at the middle part and lowest at the outer part of the *** number of mangrove community types and dominant species were lowest at the outer part,intermediate at the middle part,and highest at the inner part of the *** results suggest that the temporal variation of water salinity in mangroves is driven by different factors at different time scales and therefore it is necessary to measure water salinity at different time scales to get a complete picture of the saline environment that mangroves ***,lower salinity levels benefit mangrove species richness within a bay landscape,however,further research is needed to distinguish the effects of salinity fluctuation and salinity level in affecting mangrove species richness.

关键词： Coastal wetlands Mangroves Salinity fluctuation Species diversity Species richness

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Morpho-anatomical adaptations of dominantly grown wild Datura inoxia to wastewater resource:Productivity and ecological issues

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Geoscience Frontiers 2024年第3期15卷 248-258页

作者： Taimoor Hassan Farooq Shagufta Jabeen Awais Shakoor Muhammad Saleem Arif Nadia Siddique Khuram Shahzad Muhammad Umair Riaz Yong Li Bangor College China a Joint Unit of Bangor University and Central South University of Forestry and TechnologyChangsha 410004HunanChina department of Botany The Islamia University of BahawalpurBahawalpur 63100Pakistan Hawkesbury Institute for the Environment Western Sydney UniversityPenrithNSW 2751Australia department of Environmental Sciences Government College University FaisalabadFaisalabad 38000Pakistan department of forestry Rangeand Wildlife ManagementThe Islamia University of BahawalpurBahawalpur 63100Pakistan Institute of Geographic Sciences and Natural Resources Research Chinese Academy of SciencesBeijing 100101China National Engineering Laboratory for Applied Technology of forestry and Ecology in South China Central South University of Forestry and TechnologyChangsha 410004HunanChina

With the increasing global water scarcity,wastewater irrigation has become widespread,but it can have detrimental ecological *** wastewater contains valuable nutrients for plants,improper treatment or the use of untreated wastewater in irrigation can negatively impact soil fertility and plant *** study is divided into two parts:firstly,a phytosociological survey was conducted to identify plant species with the highest importance value index(IVI)in the vicinity of wastewaterirrigated ***,a comparative morpho-anatomical analysis was carried out to investigate the morpho-anatomical adaptations of the species with the highest IVI under wastewater irrigation compared to normal water *** results of the phytosociological survey revealed the presence of 51 plant species in the vicinity of the wastewater-irrigated areas,with varying relative densities and *** inoxia exhibited the highest IVI(28.79),followed by Xanthium strumarium(24.34),while Lippia nodiflora showed the lowest IVI(1.86).The morphological growth of *** was superior under normal water irrigation,but the average root length was greater under wastewater *** cell anatomy,cell thickness and cell area characteristics in the dermal,ground,and vascular tissues of the stem and root tended to be greater under wastewater ***,the opposite trend was observed in leaf anatomical analysis,possibly due to the combined effect of wastewater and climatic *** and root xylem thickness were greater under wastewater irrigation,whereas phloem thickness was higher under normal water *** number of vascular bundles in the stem,root,and leaf was higher under wastewater treatment compared to normal water irrigation,but their arrangement was circular in the latter and scattered under wastewater *** inoxia demonstrated strong adaptive potential under wastewater irrigation,as indicated by its highest relative d

关键词： Water pollution Phytosociology Structural growth Phytoremediation Agricultural irrigation Ecological concerns

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Relating estimates of wood properties of birch to stem form, age and species

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Journal of forestry Research 2024年第3期35卷 1-11页

作者： Grace Jones Maria Ulan Mateusz Liziniewicz Johan Lindeberg Stergios Adamopoulos Teagasc forestry Development department Ashtown Research CentreDublin 15 D15DY05Ireland Research Institutes of Sweden(RISE) GoteborgSweden The Forest Research Institute of Sweden(Skogforsk) Ekebo 225026890SvalovSweden department of forestry and Wood Technology Linnaeus University35195VaxjoSweden department of Forest Biomaterials and Technology Swedish University of Agricultural SciencesBox 700875007 UppsalaSweden

Birch has long suffered from a lack of active forest management,leading many researchers to use mate-rial without a detailed management *** collected from three birch(Betula pendula Roth,*** Ehrh.)sites in southern Sweden were analyzed using regression analysis to detect any trends or differences in wood proper-ties that could be explained by stand history,tree age and stem *** sites were genetics trials established in the same *** of acoustic velocity(AV)from non-destructive testing(NDT)and predicted AV had a higher correlation if data was pooled across sites and other stem form factors were considered.A subsample of stems had radial profiles of X-ray wood density and ring width by year created,and wood density was related to ring number from the pith and ring *** seemed likely that wood density was negatively related to ring width for both birch *** models had slight improvements if site and species were included,but only the youngest site with trees at age 15 had both birch *** paper indicated that NDT values need to be considered separately,and any predictive models will likely be improved if they are specific to the site and birch species measured.

关键词： Acoustic velocity Non-destructive testing Predictive models Regression analysis Wood density

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Experimental Study on the Axial Compression Performance of Bamboo Scrimber Columns Embedded with Steel Reinforcing Bars

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Structural Durability & Health Monitoring 2024年第6期18卷 805-833页

作者： Xueyan Lin Mingtao Wu Guodong Li Nan Guo Lidan Mei College of Civil Engineering and Transportation Northeast Forestry UniversityHarbin150000China department of Building Engineering College of Civil EngineeringTongji UniversityShanghai200092China College of Transportation and Civil Engineering Fujian Agriculture and Forestry UniversityFuzhou350002China

In this paper,a new type of bamboo scrimber column embedded with steel bars(rebars)was proposed,and the compression performance was improved by pre-embedding rebars during the preparation of the *** effects of the slenderness ratio and the reinforcement ratio on the axial compression performance of reinforced bamboo scrimber columns were studied by axial compression tests on 28 *** results showed that the increase in the slenderness ratio had a significant negative effect on the axial compression performance of the *** the slenderness ratio increased from 19.63 to 51.96,the failure mode changed from strength failure to buckling failure,and the maximum bearing capacity decreased by 43.03%.The axial compression performance of the reinforced bamboo scrimber columns did not significantly improve at a slenderness ratio of 19.63,but the opposite was true at slenderness ratios of 36.95 and *** the reinforcement ratio increased from 0%to 4.52%,the bearing capacity of those with a slenderness ratio of 51.96 increased by up to 16.99%,and the stiffness and ductility were also ***,based on existing specifications,two modification parameters,the overall elastic modulus Ec and the combined strength fcc,were introduced to establish a calculation method for the bearing capacity of the reinforced bamboo scrimber *** calculation results were compared with the test results,and the results showed that the proposed calculation models can more accurately predict the bearing capacity.

关键词： Bamboo scrimber column steel bar axial compression performance theoretical model

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High-Value-Added Utilization of Turpentine:Screening of Anti-Influenza Virus Agents fromβ-Pinene Derivatives

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Journal of Renewable Materials 2024年第1期12卷 45-56页

作者： Yiwen Li Hongyan Si Peng Wang Hai Luo Minggui Shen Xiaoping Rao Zhanqian Song Shibin Shang Zongde Wang Shengliang Liao East China Woody Fragrance and Flavor Engineering Research Center of National forestry and Grassland Administration Camphor Engineering Research Center of National Forestry and Grassland AdministrationCollege of ForestryJiangxi Agricultural UniversityNanchang330045China Institute of Chemical Industry of forestry Products China Academy of ForestryNational Engineering Laboratory for Biomass Chemical UtilizationKey and Open Laboratory of Forest Chemical EngineeringState Forestry AdministrationKey Laboratory of Biomass Energy and MaterialJiangsu ProvinceNanjing210042China College of Chemical Engineering Huaqiao UniversityXiamen361021China

Turpentine is a renewable and resourceful forest *** deep processing and utilization of turpentine,particularly its primary componentβ-pinene,has garnered widespread *** study aimed to synthesize 40 derivatives ofβ-pinene,including nopinone,3-cyanopyridines of nopinone,myrtanyl acid,myrtanyl acylthioureas,and myrtanyl *** assessed the antiviral activities of theseβ-pinene derivatives against influenza virus A/Puerto Rico/8/34(H1N1)using the 3-(4,5-dimetylthiazol-2-yl)-2,5-diphenyltetrazolium bromide ***β-pinene derivatives were used before and after cellular infection with the influenza virus to evaluate their preventive and therapeutic effects against the H1N1 *** results showed that only compound 10o exhibited a preventive effect against the H1N1 virus with a half-maximal inhibitory concentration(IC50)value of 47.6μmol/*** the compounds,4e,4i,and 4l demonstrated therapeutic effects against cellular infection,with compound 4e displaying the most potent therapeutic effect(IC50=17.5μmol/L),comparable to the positive control *** findings indicated that certainβ-pinene derivatives exhibited in vitro antiviral activity against the H1N1 influenza A virus,warranting further investigation as potential anti-influenza agents.

关键词： Antiviral activity β-pinene derivative 3-cyanopyridine influenza virus

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A parsimonious Bayesian predictive model for forecasting new reported cases of West Nile disease

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Infectious Disease Modelling 2024年第4期9卷 1175-1197页

作者： Saman Hosseini Lee W.Cohnstaedt John M.Humphreys Caterina Scoglio department of Electrical and Computer Engineering Kansas State UniversityManhattanKSUSA Foreign Arthropod-Borne Animal Diseases Research Unit National Bio-and agro-defense Facility USDA ARSManhattanKSUSA Foreign Animal Disease Research Unit National Bio-and Agro-defense FacilityUSDA ARSManhattanKSUSA

Upon researching predictive models related toWest Nile virus disease,it is discovered that there are numerous parameters and extensive information in most models,thus contributing to unnecessary *** challenge frequently encountered is the lead time,which refers to the period for which predictions are made and often is too *** paper addresses these issues by introducing a parsimonious method based on ICC curves,offering a logistic distribution model derived from the vector-borne SEIR *** existing models relying on diverse environmental data,our approach exclusively utilizes historical and present infected human cases(number of new cases).With a yearlong lead time,the predictions extend throughout the 12 months,gaining precision as new data *** conditions are derived to minimize Bayesian loss,enhancing predictive *** construct a Bayesian forecasting probability density function using carefully selected prior *** these functions,we predict monthspecific infections nationwide,rigorously evaluating accuracy with probabilistic ***,HPD credible intervals at 90%,95%,and 99%levels is *** assessment is conducted for HPD intervals,measuring the proportion of intervals that does not include actual reported cases for 2020e2022.

关键词： West nile virus ICC curve Bayesian model Logistic distribution HPD credible interval

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Taxonomic dependency and spatial heterogeneity in assembly mechanisms of bacteria across complex coastal waters

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Ecological Processes 2024年第1期13卷 80-97页

作者： Huizhen Yan Dandan Lin Gaoke Gu Yujie Huang Xuya Hu Zhenhao Yu Dandi Hou Demin Zhang Barbara J.Campbell Kai Wang State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of agro-Products School of Marine SciencesNingbo University Key Laboratory of Marine Biotechnology of Zhejiang Province School of Marine Sciences Ningbo University department of Biological Sciences Clemson University

Background Understanding community assembly mechanisms across taxa and space is fundamental for microbial ecology. However, the variability and determinants of assembly processes over taxa and space remain unclear. Here, we investigated taxonomic dependency and spatial heterogeneity in bacterial assembly mechanisms across coastal waters in the East China Sea using neutral and null models with customized visualization *** Overall, bacterial assembly mechanisms varied across broad taxonomic groups(phyla and proteobacterial classes) and space at the regional scale. A determinism–stochasticity balanced mechanism governed total bacterial assembly, while taxonomic dependency existed in assembly mechanisms and ecological processes. Among community ecological features, niche breadth and negative-to-positive cohesion ratio were strongly associated with the determinism-to-stochasticity ratio of bacterial groups. Bacterial assembly mechanisms commonly exhibited spatial heterogeneity, the extent and determinants of which varied across taxonomic groups. Spatial assembly of total bacteria was directly driven by many environmental factors and potential interactions between taxa, but not directly by geographic factors. Overall, the bacterial groups with higher spatial heterogeneity in assembly mechanisms were more related to environmental and/or geographic factors(except Bacteroidetes), while those with lower heterogeneity were more related to ecological *** Our results confirm the pervasiveness of taxonomic dependency and spatial heterogeneity in bacterial assembly, providing a finer understanding about regulation across complex coastal waters.

关键词： Bacterioplankton Assembly mechanism Niche breadth Null model Environmental gradient Biogeography

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Annual growth of Fagus orientalis is limited by spring drought conditions in Iran’s Golestan Province

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Journal of forestry Research 2024年第1期35卷 128-142页

作者： Khalil Ghorbani Jahangir Mohammadi Laleh Rezaei Ghaleh department of Water Engineering Faculty of Water and Soil EngineeringGorgan University of Agricultural Sciences and Natural ResourcesGorganIran department of forestry Gorgan University of Agricultural Sciences and Natural ResourcesGorganIran department of Water Engineering Faculty of AgricultureUrmia UniversityUrmiaIran

Due to the lack of a uniform and accurate defi-nition of‘drought’,several indicators have been introduced based on different variables and methods,and the efficiency of each of these is determined according to their relationship with *** relationship between two drought indices,SPI(standardized precipitation index)and SPEI(standard-ized precipitation-evapotranspiration index)in different sea-sons was investigated using annual rings of 15 tree samples to determine the effect of drought on the growth of oriental beech(Fagus orientalis Lipsky)in the Hyrcanian forests of northern *** different evapotranspiration calcula-tion methods were evaluated on SPEI efficiency based on Hargreaves-Samani,Thornthwaite,and Penman-Monteith methods using the step-by-step M5 decision tree regression *** results show that SPEI based on the Penman-Monteith in a three-month time scale(spring)had similar temporal changes and a better relationship with annual tree rings(R^(2)=0.81)at a 0.05 significant *** change and a decreasing trend in the time series of annual tree rings are similar to the variation in the SPEI based on the Penman-Monteith *** affecting evapotranspiration,temperature,wind speed,and sunshine hours(used in the Penman-Monteith method),increased but precipitation *** non-linear modeling methods,SPEI based on Penman-Monteith best illustrated climate changes affecting tree growth.

关键词： Climate change Drought index Hyrcanian forests SPEI'Annual growth rings Fagus orientalis

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