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t-SNE:A study on reducing the dimensionality of hyperspectral data for the regression problem of estimating oenological parameters

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Artificial Intelligence in Agriculture 2023年第1期7卷 58-68页

作者： Rui Silva Pedro Melo-Pinto CITAB-Centre for the Research and Technology of Agro-Environmental and Biological Sciences Inov4Agro-Institute for InnovationCapacity Building and Sustainability of Agri-Food ProductionUniversidade de Trás-os-Montes e Alto DouroQuinta dos PradosVila Real 5000-801Portugal departamento de engenharias Escola de Ciências e TecnologiaUniversidade de Trás-os-Montes e Alto DouroQuinta dos PradosVila Real 5000-801Portugal

In recent years there is a growing importance in using machine learning techniques to improve procedures in precision agriculture:in this work we perform a study on models capable of predicting oenological parameters from hyperspectral images of wine grape berries,a specially relevant topic to boost production tasks for winemakers.Specifically,we explore the capabilities of a novel technique mostly used for visualization,t-Distributed Stochastic Neighbor Embedding(t-SNE),for reducing the dimensionality of the highly complex hyperspectral data and compare its performance with Principal Component Analysis(PCA)method,which despite the introduction of many nonlinear dimensionality reduction techniques over the years,had achieved the best results for real-world data across several studies in literature.Additionally we explore the potential of Kernel t-SNE,an extension to the t-SNE method that allows for the usage of the technique in streaming data or online scenarios.Our results show that,in a direct comparison,t-SNE achieves better metrics than PCA for most of the data sets in this work and that the regressor(Support Vector Regression,SVR)performs better with the t-SNE reduced features as inputs,accomplishing better predictions with lower error rates.Comparing the results with current literature,our shallow learning model paired with t-SNE achieves either better or on par results than those reported,even competing with more advanced models that use deep learning techniques,which should propel the introduction of t-SNE in more studies that require dimensionality reduction.

关键词： Hyperspectral images Dimensionality reduction Regression T-SNE Support vector machines Wine grape berries

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Unraveling one billion years of geological evolution of the southeastern Amazonia Craton from detrital zircon analyses

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Geoscience Frontiers 2022年第5期13卷 129-152页

作者： Camille Rossignol Paul Yves Jean Antonio Francesco Narduzzi Eric Siciliano Rego Lívia Teixeira Romário Almeida de Souza Janaína N.Ávila Marco A.L.Silva Cristiano Lana Ricardo I.F.Trindade Pascal Philippot departamento de Geofísica Instituto de AstronomiaGeofísica e Ciências Atmosféricas da Universidade de São PauloRua do Matão1226-Cidade UniversitáriaSão Paulo 05508-090Brazil Institut de Physique du Globe de Paris Universitéde ParisCNRSParisFrance Géosciences Montpellier Universitéde MontpellierCNRSUniversitédes AntillesMontpellierFrance Instituto de Geociências Universidade de São PauloRua do Lago562-Cidade UniversitáriaSão Paulo 05508-080Brazil Instituto de Geociências e engenharias Universidade Federal do Sul e Sudeste do Pará–UNIFESSPAFolha 17Quadra 04Lote especialNova MarabáMarabáPará68505-080Brazil Research School of Earth Sciences The Australian National University142 Mills RoadCanberraACT 2601Australia Applied Isotope Research Group Departamento de GeologiaEscola de MinasUniversidade Federal de Ouro PretoRua Diogo de Vasconcelos12235400-000 Ouro PretoMGBrazil

despite representing one of the largest cratons on Earth,the early geological evolution of the Amazonia Craton remains poorly known due to relatively poor exposure and because younger metamorphic and tectonic events have obscured initial information.In this study,we investigated the sedimentary archives of the Carajás Basin to unravel the early geological evolution of the southeastern Amazonia Craton.The Carajás Basin contains sedimentary rocks that were deposited throughout a long period spanning more than one billion years from the Mesoarchean to the Paleoproterozoic.The oldest archives preserved in this basin consist of a few ca.3.6 Ga detrital zircon grains showing that the geological roots of the Amazonia Craton were already formed by the Eoarchean.During the Paleoarchean or the early Mesoarchean(deposition of some of the world largest iron formations.The emplacement of this LIP immediately preceded a period of continental extension that formed a rift infilled first by iron formations followed by terrigenous sediments.This major change of sedimentary regime might have been controlled by the regional tectonic evolution of the Amazonia Craton and its emergence above sea-level.During the Paleoproterozoic,at ca.2.1 Ga,the Rio Fresco Group,consisting of terrigenous sediments from the interior of the Amazonia Craton,was deposited in the Carajás Basin.At that time,the Amazonian lithosphere could have either underwent thermal subsidence forming a large intracratonic basin or could have been deformed by long wavelength flexures that induced the formation of basins and swells throughout the craton under the influence of the growing Transamazonian mountain belt.

关键词： Carajás Basin Chemical Abrasion–LA-ICP-MS analyses Age distribution comparison Parauapebas Large Igneous Province Transamazonian orogeny

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Root Growth, Nutrition and Yield of Maize with Applied Different Limestone Particle Size in the Cerrado Soil

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American Journal of Plant Sciences 2014年第4期5卷 463-472页

作者： Rafael Felippe Ratke Hamilton Seron Pereira Joao de deus Gomes dos Santos Junior Joaquim JoséFrazao Juliano Magalhaes Barbosa Bruno de Oliveira Dias departamento de engenharias AgronomiaCampus Professora Cinobelina ElvasUniversidade Federal do PiauíBom JesusBrazil Instituto de Ciencias Agrárias Universidade Federal de UberlandiaUberlandiaBrazil Embrapa Centro Nacional de Pesquisa no CerradoPlanaltinaBrazil Programa de Pós-Graduacao em Agronomia Universidade Federal de GoiásGoianiaBrazil

The limestone with smaller particle size provides rapid correction of soil acidity. However, the limestone with large particles can promote bigger root growth, and may still have a residual effect on the soil. The aim of this study was to evaluate the residual effect of the application and incorporation of different limestone with a particle size bigger than 0.30 mm in root growth, nutrition and yield of maize in Cerrado soil. A randomized completed block utilized in this experiment, with five treatments and four replications. The grain sizes of dolomitic limestone incorporated into the Oxisol were: 0 (control, no-lime), 2.00-0.82 mm, 0.82-0.56 mm, 0.56-0.30 mm, 0.30-0.20 mm, in doses of 6.5 t·ha-1, 3.9 t·ha-1, 2.6 t·ha-1 and 1.3 t·ha-1 respectively. The limestone applied in introduction no-tillage. The maize were evaluated of root attributes, nutrition and grain yield in two years 2009 and 2010. The use of limestone particle size of 2.00-0.82 mm, and the quantity of 6.5 t·ha-1 applied to the soil and incorporated showed elongation and root growth of maize thin depth of 20-40 cm in the soil. In that, same proposed management of the limestone was the highest maize grain yield in the first year. The rooting characteristics evaluated correlated with leaf Ca and Cu and maizegrain yield.

关键词： Limestone No-Tillage Zea Mays

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Root Growth, Nutrition and Yield of Maize with Applied Finely Limestone in Surface of Cerrado Soil

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American Journal of Plant Sciences 2014年第6期5卷 834-844页

作者： Rafael Felippe Ratke Hamilton Seron Pereira Joao de deus Gomes dos Santos Junior Joaquim JoséFrazao Juliano Magalhaes Barbosa Bruno de Oliveira Dias departamento de engenharias AgronomiaCampus Professora Cinobelina ElvasUniversidade Federal do PiauíBom JesusBrazil Instituto de Ciencias Agrárias Universidade Federal de UberlandiaUberlândiaBrazil Embrapa Centro Nacional de Pesquisa no CerradoPlanaltinaBrazil Programa de Pós-graduacao em Agronomia Universidade Federal de GoiásGoianiaBrazil

The surface applies lime to correcting soil acidity in no-tillage and promotes root development and yield of maize. However, limestone with a particle size smaller than 0.30 mm cannot promote this effect. The aim of this study was to determine the root attributes, nutrition and productivity of maize with limestone ground in no-tillage. The experimental design was randomized blocks with five treatments and four replications. The treatments consisted of different particle sizes of limestone applying superficially to the soil under NT 0) control, without lime, 1) 0.30 mm to 0.20 mm 2) 0.20 mm to 0.10 mm, 3) 0, 10 mm to 0.05 mm 4) 0.05 mm to 0.01 mm. Attributes root, leaf nutrition and grain yield of maize were evaluated in two years 2009 and 2010. The elongation of roots in a 20-40 cm depth was greater when using limestone with particle size between 0.30 mm and 0.20 mm. The root length of maize plants correlated with the levels of Mn in maize leaves. The root development promoted by liming effect was not reflected in the productivity of maize.

关键词： Particle Size No-Tillage Limestone

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Use of Spatial Analysis to Assess Geographic Accessibility of Community Pharmacies in São Mateus

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Pharmacology & Pharmacy 2013年第5期4卷 438-442页

作者： Brígida Dias Fernandes Aracelli Ferreira Lírio Rodrigo Randow de Freitas Ana Carolina Melchiors Pharmacy Pratice Research Group Departamento de Ciências da Saúde-DCS Sao Mateus Brasil. Universidade Federal do Espírito Santo-UFES Centro Universitário Norte do Espírito Santo-CEUNES Departamento de Ciências da Saúde-DCS Sao Mateus Brasil Universidade Federal do Espírito Santo-UFES Centro Universitário Norte do Espírito Santo-CEUNES Departamento de Engenharias e Computacao-DETEC Núcleo de Pesquisa em Gestao de Sistemas de Producao (NPGSP) Laboratório de Gestao Costeira-Aquicultura e Pesca (LGCap) Sao Mateus Brasil Pharmacy Pratice Research Group Departamento de Ciências da Saúde-DCS Sao Mateus Brasil.

Pharmaceutical services contribute to the rational use of medicines by ensuring the provision of appropriate, safe and effective pharmacotherapies. Thus, it is important to investigate whether the geographical distribution of pharmacies causes inequalities in access in countries like Brazil, where there is no federal law regulating the opening of new establishments (in contrast to many European countries). This study analyzed the accessibility of community pharmacies in the city of Sao Mateus, Espírito Santo, Brazil. The authors obtained the geographical coordinates of pharmacies and healthfacilities, which scanned and georeferenced the study area. The 40 pharmacies included in the spatial analysis presented a heterogeneous distribution, with the existence of neighborhoods with an accumulation of pharmacies and others with no pharmacies. The authors found that only 43.7% of the study area received pharmaceutical service coverage, when buffer zones of 350 meters are incorporated, and that most of the districts have a minimum distance of 100 meters between health facilities and pharmacies. It was concluded that the use of GIS proved to be very suitable for analysis of pharmaceutical services, enabling knowledge of the local situation and serving as a stimulus for future studies.

关键词： Geographical Accessibility Quality Pharmaceutical Service Spatial Analysis Distribution of Pharmacies Quality Assessment

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