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Molecular and structural characterization of a promiscuous chalcone synthase from the fern species Stenoloma chusanum

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Journal of Integrative Plant biology 2022年第10期64卷 1935-1951页

作者： Rong Ni Meng Niu Jie Fu Hui Tan Ting‐Ting Zhu Jing Zhang Hong‐Xiang Lou Peng Zhang Jian‐Xu Li Ai‐Xia Cheng Key laboratory of chemical biology of natural products Ministry of EducationSchool of Pharmaceutical SciencesShandong UniversityJinan 250100China National Key laboratory of Plant Molecular Genetics Center for Excellence in Molecular Plant SciencesShanghai Institute of Plant Physiology and EcologyChinese Academy of SciencesShanghai 200032China

The key enzymes involved in the flavonoid biosynthesis pathway have been extensively studied in seed plants,but relatively less in *** this study,two 4-Coumarate:coenzyme A ligases(Sc4CL1 and Sc4CL2)and one novel chalcone synthase(ScCHS1)were functionally characterized by mining the Stenoloma chusanum transcriptome *** Sc4CLs were able to esterify various hydroxycinnamic acids to corresponding acyl-coenzyme A(CoA).ScCHS1could catalyze p-coumaroyl-CoA,cinnamoyl-CoA,caffeoyl-CoA,and feruloyl-CoA to form naringenin,pinocembrin,eriodictyol,and homoeriodictyol,***,enzymatic kinetics studies revealed that the optimal substrates of ScCHS1were feruloyl-CoA and caffeoyl-CoA,rather than p-coumaroyl-CoA,which was substantially different from the common *** and sitedirected mutagenesis experiments indicated that the amino acid residues,Leu87,Leu97,Met165,and Ile200,located in the substrate-binding pocket near the B-ring of products,could exert a significant impact on the unique catalytic activity of ***,overexpression of ScCHS1 in tt4 mutants could partially rescue the mutant ***,ScCHS1 and Sc4CL1 were used to synthesize flavanones and flavones with multi-substituted hydroxyl and methoxyl B-ring in Escherichia coli,which can effectively eliminate the need for the cytochrome P450 hydroxylation/O-methyltransferase from simple phenylpropanoid *** summary,the identification of these important Stenoloma enzymes provides a springboard for the future production of various flavonoids in ***.

关键词： chalcone synthase 4-Coumarate:coenzyme A ligases homoeriodictyol microbial production Stenoloma chusanum structure elucidation

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可生物降解塑料取代传统塑料--对碳排放的影响

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Engineering 2024年第1期32卷 152-162页

作者： Guanyi Chen Jianyuan Li Yunan Sun Zhi Wang Gary ALeeke Christian Moretti Zhanjun Cheng Yuan Wang Ning Li Lan Mu Jinyu Li Junyu Tao Beibei Yan Li'an Hou Interdisciplinary Innovation lab for Environment and Energy School of Mechanical Engineering&School of Biotechnology and Food ScienceTianjin University of CommerceTianjin 300134China School of Environmental Science and Engineering Tianjin UniversityTianjin 300350China School of ecology and Environment Tibet UniversityLhasa 850012China Tianjin Key laboratory of Biomass Wastes UtilizationTianjin Engineering Research Center for Organic Wastes Safe Disposal and Energy UtilizationTianjin 300072China School of chemical Engineering University of BirminghamBirmingham B152TTUK Department of Environmental Systems Science ETH ZürichZürich CH-8092Switzerland

In recent years,a great deal of attention has been focused on the environmental impact of plastics,includ-ing the carbon emissions related to plastics,which has promoted the application of biodegradable *** worldwide have shown high interest in replacing traditional plastics with biodegradable ***,no systematic comparison has been conducted on the carbon emissions of biodegrad-able versus traditional plastic *** study evaluates the carbon emissions of traditional and biodegradable plastic products(BPPs)over four stages and briefly discusses environmental and economic *** scenarios-namely,the traditional method,chemical recycling,industrial composting,and anaerobic digestion-are considered for the disposal of waste BPPs(WBPPs).The analysis takes China as a case *** results show that the carbon emissions of 1000traditional plastic products(plastic bags,lunch boxes,cups,etc.)were52.09-150.36 carbon emissions equivalent of per kilogram(kg CO_(2)eq),with the stage of plastic production contributing 50.71%-50.77%.In comparison,1000 similar BPPs topped out at 21.06-56.86 kg CO_(2)eq,approximately 13.53%-62.19%lower than traditional plastic *** difference was mainly at the stages of plastic production and waste disposal,and the BPPs showed significant carbon reduction potential at the raw material acquisition *** disposal plays an important role in environmental impact,and composting and anaerobic digestion are considered to be preferable disposal methods for ***,the high cost of biodegradable plastics is a challenge for their widespread *** study has important reference significance for the sustainable development of the biodegradableplastics industry.

关键词： Carbon emissions Biodegradable plastics Different disposal scenarios Daily life consumption Environmental and economic discussion

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natural product sciences: an integrative approach to the innovations of plant natural products

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Science China(Life Sciences) 2020年第11期63卷 1634-1650页

作者： Yuemao Shen Xiaojiang Hao Key laboratory of chemical biology of natural products School of Pharmaceutical SciencesShandong UniversityJinan 250012China State Key laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of BotanyChinese Academy of SciencesKunming 650201China

The study on plant natural products not only helps us understand that their structural diversity is the inevitable result of plant species diversity, but also helps us understand certain rules and unity of the inevitable connection between the two. The diversity and complexity of chemical structures of many natural products are beyond imagination before we elucidated their *** question that follows is what is the biological significance of these natural products. Intrigued by the relationship between plant resources, natural products and biological functions, the Hao laboratory has taken an integrative approach that employs tools and knowledge from multi-disciplines, including natural product chemistry, chemical ecology and chemical biology, to unveil the effects of plant natural products on plant resistance to diseases, and environmental acclimations. Collaborating with cell biologists, the research has resulted in discovery of new mechanisms of cellular signaling and lead compounds.

关键词： plant natural product chemical structure biological significance

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Novel insights into the dehalogenation mechanism and ecotoxicity assessment of 6:2 Cl-PFESA from density functional theory calculations

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Emerging Contaminants 2024年第2期10卷 115-122页

作者： Youxin Xu Chenxi Zhang Zhe Wang Bing Chen Xiaomin Sun Shuguang Wang Huifang Tian institute of Environmental Biotechnology and Functional Materials School of Environmental Science and EngineeringShandong UniversityQingdaoShandong266237China Shandong Engineering laboratory for Clean Utilization of chemical Resources Weifang University of Science and TechnologyWeifang262700China Northern Region Persistent Organic Pollution Control(NRPOP)laboratory Faculty of Engineering and Applied ScienceMemorial University of NewfoundlandSt.John'sNLA1B 3X5Canada Environment Research institute Shandong UniversityQingdaoShandong266237China Sino-French Research institute for ecology and Environment(ISFREE) Shandong UniversityQingdaoShandong266237China

The electroplating industry is the main source of 6:2 chlorinated polyfluorinated ether sulfonate(6:2 Cl-PFESA)pollution,which presents risks to human health and the *** is therefore crucial to develop effective 6:2 Cl-PFESA degradation *** oxidation is a potential treatment method for 6:2 Cl-PFESA due to its outstanding oxidative degradability following the generation of the sulfate radical(SO_(4)^(•−))and hydroxyl radical(•OH).It has proven difficult to acquire a full understanding of the reaction mechanism and formation of intermediate(IM)products through conventional experimental studies because they are costly and ***,a theoretical analysis method based on density functional theory(DFT)calculations was *** DFT results showed that electron transfer for the degradation of 6:2 Cl-PFESA could be initiated by the protonated sulfate radical(HSO_(4)•,ΔG≠SET=9.16 kcal/mol),rather than SO4•−(ΔG≠SET=41.60 kcal/mol).After desulfonation,the reaction underwent stepwise decarboxylation cycles under the action of•OH,leading to the elimination of the CF_(2) units until there was complete mineralization into HCl,HF,and CO_(2).Furthermore,the IMs and the end products of 6:2 Cl-PFESA were evaluated using ECOSAR and TEST *** low bioaccumulation of the short-chain IMs meant that they could be considered safe in terms of ecotoxicity and health *** research determined the theoretical and mechanistic basis of the effects of persulfate in the treatment of water containing 6:2 Cl-PFESA,and its structural analogues.

关键词： Active free radicals Dehalogenation reaction Degradation mechanisms Theoretical prediction Ecotoxicity assessment

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Reaction Kinetics and Secondary Organic Aerosol Composition Analysis of 2-Cyclohexen-1-one with NO_(3) Radicals

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chemical Research in Chinese Universities 2024年第4期40卷 730-736页

作者： HU Lin TONG Shengrui XU Yanyong ZHANG Hailiang YU Shanshan CHEN Meifang GE Maofa Structural Chemistry of Unstable and Stable Species Chinese Academy of Sciences Research/Education Center for Excellence in Molecular SciencesInstitute of ChemistryChinese Academy of SciencesBeijing100190P.R.China College of ecology and Environment Xinjiang UniversityUrumqi830017P.R.China University of Chinese Academy of Sciences Beijing100049P.R.China

Unsaturated ketones are typical oxygenated volatile organic compounds(OVOCs)with high reactivity,and are important precursors in air *** sources of OVOCs are complex and include direct emissions and secondary oxidation formation of VOCs in the atmosphere.2-Cyclohexen-1-one is a widespread substance,and is derived from the industrial catalytic oxidation of *** this paper,we investigated the rate constants of the chemical reactions of 2-cyclohexen-1-one with NO_(3) radicals,which is(7.25±0.29)×10^(-15) cm^(3)·molecule^(-1)·s^(-1) at 298 K and under 1 atm(1 atm=101325Pa).It supplemented the kinetics of NO_(3) radicals database,and revealed its effects in the nighttime *** addition,the reaction products of 2-cyclohexen-1-one with NO_(3) radicals were detected by Fourier transform ion cyclotron resonance mass spectrometry(FT-ICR MS),which revealed a series of nitrate esters in the composition of the secondary organic aerosol(SOA),which may reduce atmospheric ***,the possible pathways for the generation of the products were developed.

关键词： Kinetics Unsaturated ketone Nitrate radical Secondary organic aerosol

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Reaction path synthesis methodology for waste minimization

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Science China Chemistry 2004年第3期47卷 206-213页

作者： HU Shanying LI Mingheng LI Yourun SHEN Jingzhu LIU Zheng Center for Industrial ecology Department of Chemical Engineering Tsinghua University Beijing 100084 China

It is a key step for reducing waste generation in chemical processes to design op-timal reaction paths. In this paper, methods of waste minimization for reaction path synthesis problems are proposed to realize eco-industrial production mode with minimum waste emission. A new conception of simple stoichiometric reaction is presented for reaction path synthesis problem. All simple stoichiometric reactions can be obtained by mathematical transformation for atom matrix of a reaction system. Based on the conception, a two-tier optimization method for complex reaction path synthesis problems is addressed. The first step is to determine the eco-nomic optimal overall reactions, and the second step to decompose each overall reaction into several sub-reactions and find out the best thermodynamic feasible reaction path. Further, a method of reaction path synthesis with waste closed-cycle is proposed based on simple stoichiometric reactions for achieving zero waste emission to poly-generation problem of multi-products. Case studies show that the proposed methods can efficiently solve practical re-action path synthesis problems.

关键词： reaction path synthesis waste minimization simple stoichiometric reaction atom matrix closed-cycle.

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Toxic effects of perfluorononanoic acid on the development of Zebrafish(Danio rerio) embryos

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Journal of Environmental Sciences 2015年第6期27卷 26-34页

作者： Hui Liu Nan Sheng Wei Zhang Jiayin Dai Key laboratory of Animal ecology and Conservation biology Institute of Zoology Chinese Academy of Sciences University of Chinese Academy of Sciences

Perfluorononanoic acid（PFNA） is a nine-carbon perfluoroalkyl acid widely used in industrial and domestic products. It is a persistent organic pollutant found in the environment as well as in the tissues of humans and wildlife. There is a concern that this chemical might be a developmental toxicant and teratogen in various ecosystems. In the present study,the toxic effects of PFNA were evaluated in zebrafish（Danio rerio） embryos. One hour post-fertilization embryos were treated with 0, 25, 50, 100, 200, 300, 350, and 400 μmol/L PFNA for 96 hr in 6-well plates. Developmental phenotypes and hatching rates were observed and recorded. Nineteen genes related to oxidative stress and lipid metabolism were examined using Quantitative RT-PCR and confirmed by whole mount in situ hybridization（WISH）. Results showed that PFNA delayed the development of zebrafish embryos, reduced the hatching rate, and caused ventricular edema and malformation of the spine. In addition, the amount of reactive oxygen species in the embryo bodies increased significantly after exposure to PFNA compared with that of the control group. The Quantitative RT-PCR and WISH experiments demonstrated that m RNA expression of the lfabp and ucp2 genes increased significantly while that of sod1 and mt-nd1 decreased significantly after PFNA exposure. The m RNA expression levels of gpx1 and mt-atp6 decreased significantly in the high concentration group. However, the m RNA expression levels of both ppara and pparg did not show any significant variation after exposure. These findings suggest that PFNA affected the development of zebrafish embryos at relatively low concentrations.

关键词： Perfluorononanoic acid Zebrafish embryo Danio rerio Developmental toxicity

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Prediction model on hydrolysis kinetics of phthalate monoester:A density functional theory study

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Journal of Environmental Sciences 2024年第1期135卷 51-58页

作者： Tong Xu Jingwen Chen Deming Xia Weihao Tang Jiansheng Cui Chun Liu Shuangjiang Li College of Environmental Science and Engineering Hebei University of Science and TechnologyShijiazhuang 050000China Key laboratory of Industrial ecology and Environmental Engineering(Ministry of Education) School of Environmental Science and TechnologyDalian University of TechnologyDalian 116024China National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and ManagementInstitute of Eco-environmental and Soil SciencesGuangdong Academy of SciencesGuangzhou 510650China

As primary degradation products of phthalate esters,phthalate monoesters(MPEs)have been widely detected in various aquatic environments and drawn growing toxicological *** kinetics that is of importance for assessing environmental persistence of chemicals remain elusive for ***,kinetics of base-catalyzed and neutral hydrolysis for 18 MPEs with different leaving groups was investigated by density functional theory *** indicate that MPEs with leaving groups having p Kaofchemical process that governs MPE persistence in aquatic environments.

关键词： Phthalate monoesters Phthalate esters Hydrolysis Density functional theory Quantitative structure-activity relationship

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Emerging contaminants:A One Health perspective

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The Innovation 2024年第4期5卷 140-170,139页

作者： Fang Wang Leilei Xiang Kelvin Sze-Yin Leung Martin Elsner Ying Zhang Yuming Guo Bo Pan Hongwen Sun Taicheng An Guangguo Ying Bryan WBrooks Deyi Hou Damian EHelbling Jianqiang Sun Hao Qiu Timothy MVogel Wei Zhang Yanzheng Gao Myrna JSimpson Yi Luo Scott XChang Guanyong Su Bryan MWong Tzung-May Fu Dong Zhu Karl JJobst Chengjun Ge Frederic Coulon Jean Damascene Harindintwali Xiankui Zeng Haijun Wang Yuhao Fu Zhong Wei Rainer Lohmann Changer Chen Yang Song Concepcion Sanchez-Cid Yu Wang Ali El-Naggar Yiming Yao Yanran Huang Japhet Cheuk-Fung Law Chenggang Gu Huizhong Shen Yanpeng Gao Chao Qin Hao Li Tong Zhang Natàlia Corcoll Min Liu Daniel SAlessi Hui Li Kristian KBrandt Yolanda Pico Cheng Gu Jianhua Guo Jianqiang Su Philippe Corvini Mao Ye Teresa Rocha-Santos Huan He Yi Yang Meiping Tong Weina Zhang Fidèle Suanon Ferdi Brahushi Zhenyu Wang Syed AHashsham Marko Virta Qingbin Yuan Gaofei Jiang Louis A.Tremblay Qingwei Bu Jichun Wu Willie Peijnenburg Edward Topp Xinde Cao Xin Jiang Minghui Zheng Taolin Zhang Yongming Luo Lizhong Zhu Xiangdong Li DamiàBarceló Jianmin Chen Baoshan Xing Wulf Amelung Zongwei Cai Ravi Naidu Qirong Shen Janusz Pawliszyn Yong-guan Zhu Andreas Schaeffer Matthias C.Rillig Fengchang Wu Gang Yu James M.Tiedje State Key laboratory of Soil and Sustainable Agriculture Institute of Soil ScienceChinese Academy of SciencesNanjing 210008China University of Chinese Academy of Sciences Beijing 100049China Department of Chemistry Hong Kong Baptist UniversityHong KongChina HKBU institute of Research and Continuing Education Shenzhen Virtual University ParkShenzhenChina Technical University of Munich TUM School of Natural SciencesInstitute of Hydrochemistry85748 GarchingGermany School of Resources&Environment Northeast Agricultural UniversityHarbin 150030China Climate Air Quality Research UnitSchool of Public Health and Preventive MedicineMonash UniversityMelbourneVICAustralia Faculty of Environmental Science&Engineering Kunming University of Science&TechnologyKunming 650500China Ministry of Education Key laboratory of Pollution Processes and Environmental Criteria College of Environmental Science and EngineeringNankai UniversityTianjin 300350China Guangdong Key laboratory of Environmental Catalysis and Health Risk Control School of Environmental Science and EngineeringInstitute of Environmental Health and Pollution ControlGuangdong University of TechnologyGuangzhou 510006China Ministry of Education Key laboratory of Environmental Theoretical Chemistry South China Normal UniversityGuangzhouGuangdong 510006China Department of Environmental Science Baylor UniversityWacoTXUSA Center for Reservoir and Aquatic Systems Research(CRASR) Baylor UniversityWacoTXUSA School of Environment Tsinghua UniversityBeijing 100084China School of Civil and Environmental Engineering Cornell UniversityIthacaNY 14853USA Key laboratory of Microbial Technology for Industrial Pollution Control of Zhejiang Province Zhejiang University of TechnologyHangzhou 310014China School of Environmental Science and Engineering Shanghai Jiao Tong UniversityShanghai 200240China laboratoire d’Ecologie Microbienne Universite Claude Bernard Lyon 1UMR CNRS 5557UMR INRAE 1418VetAgro Sup69622 VilleurbanneFrance Department of Pla

Environmental pollution is escalating due to rapid global development that often prioritizes human needs over planetary *** global efforts to mitigate legacy pollutants,the continuous introduction of new substances remains a major threat to both people and the *** response,global initiatives are focusing on risk assessment and regulation of emerging contaminants,as demonstrated by the ongoing efforts to establish the UN’s Intergovernmental Science-Policy Panel on chemicals,Waste,and Pollution *** review identifies the sources and impacts of emerging contaminants on planetary health,emphasizing the importance of adopting a One Health *** for monitoring and addressing these pollutants are discussed,underscoring the need for robust and socially equitable environmental policies at both regional and international *** actions are needed to transition toward sustainable pollution management practices to safeguard our planet for future generations.

关键词： pollution planet contaminants

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MOSPD2 is a receptor mediating the LEAP-2 effect on monocytes/macrophages in a teleost,Boleophthalmus pectinirostris

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Zoological Research 2020年第6期41卷 644-655页

作者： Chang-Hong Li Jie Chen Li Nie Jiong Chen State Key laboratory for Managing Biotic and chemical Threats to the Quality and Safety of Agro-products Ningbo UniversityNingboZhejiang 315211China laboratory of Biochemistry and Molecular biology School of Marine SciencesMeishan CampusNingbo UniversityNingboZhejiang 315832China Key laboratory of Applied Marine Biotechnology of Ministry of Education Meishan CampusNingbo UniversityNingboZhejiang 315832China College of ecology Lishui UniversityLishuiZhejiang 323000China

Liver-expressed antimicrobial peptide 2(LEAP-2)is a cationic peptide that plays an important role in a host’s innate immune *** previously demonstrated that mudskipper(Boleophthalmus pectinirostris)LEAP-2(BpLEAP-2)induces chemotaxis and activation of monocytes/macrophages(MO/MΦ).However,the molecular mechanism by which BpLEAP-2 regulates MO/MΦ remains *** this study,we used yeast twohybrid cDNA library screening to identify mudskipper protein(s)that interacted with BpLEAP-2,and characterized a sequence encoding motile sperm domain-containing protein 2(BpMOSPD2).The interaction between BpLEAP-2 and BpMOSPD2 was subsequently confirmed by co-immunoprecipitation(Co-IP).Sequence analyses revealed that the predicted BpMOSPD2 contained an N-terminal extracellular portion composed of a CRAL-TRIO domain and a motile sperm domain,a C-terminal transmembrane domain,and a short cytoplasmic *** tree analysis indicated that BpMOSPD2 grouped tightly with fish MOSPD2 homologs and was most closely related to that of the Nile tilapia(Oreochromis niloticus).The recombinant BpMOSPD2 was produced by prokaryotic expression and the corresponding antibody was prepared for protein concentration *** interference was used to knockdown BpMOSPD2 expression in the mudskipper MO/MΦ,and the knockdown efficiency was confirmed by quantitative real-time polymerase chain reaction(qRT-PCR)and western *** of BpMOSPD2 significantly inhibited BpLEAP-2-induced chemotaxis of mudskipper MO/MΦand BpLEAP-2-induced bacterial killing ***,knockdown of BpMOSPD2 inhibited the effect of BpLEAP-2 on mRNA expression levels of BpIL-10,BpTNFα,BpIL-1β,and BpTGFβ in MO/MΦ.In general,BpMOSPD2 directly interacted with BpLEAP-2,and mediated the effects of BpLEAP-2 on chemotaxis and activation of mudskipper MO/MΦ.This is the first identification of MOSPD2 as a receptor for LEAP-2.

关键词： LEAP-2 Monocyte/macrophage MOSPD2 RNA interference Yeast two-hybrid

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