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Polyketides with potential bioactivities from the mangrove‑derived fungus Talaromyces ***0362

Marine Life Science & Technology 2023年第2期5卷 232-241页

作者： Huawei Lv Haibo Su Yaxin Xue Jia Jia Hongkai Bi Shoubao Wang Jinkun Zhang Mengdi Zhu Mahmoud Emam Hong Wang Kui Hong Xing-Nuo Li College of Pharmaceutical Science&Key Laboratory of Marine Fishery Resources Exploitment&Utilization of Zhejiang Province Zhejiang University of TechnologyHangzhou 310014China School of Pharmaceutical Sciences Wuhan UniversityWuhan 430072China Department of Pathogen Biology&Jiangsu Key Laboratory of Pathogen Biology Nanjing Medical UniversityNanjing 211166China Beijing Key Laboratory of Drug Target Research and New Drug Screening Institute of Materia MedicaChinese Academy of Medical SciencesBeijing 100700China Research Center of Analysis and Measurement Zhejiang University of TechnologyHangzhou 310014China Department of Phytochemistry and plant systematics National Research CentreGizaEgypt

Metabolites of microorganisms have long been considered as potential sources for drug *** this study,fve new depsidone derivatives,talaronins A-E(1-5)and three new xanthone derivatives,talaronins F-H(6-8),together with 16 known compounds(9-24),were isolated from the ethyl acetate extract of the mangrove-derived fungus Talaromyces species *** structures were elucidated by analysis of spectroscopic data and chemical methods including alkaline hydrolysis and Mosher’s *** 1 and 2 each attached a dimethyl acetal group at the aromatic ring.A putative biogenetic relationship of the isolated metabolites was presented and suggested that the depsidones and the xanthones probably had the same biosynthetic precursors such as chrysophanol or *** antimicrobial activity assay indicated that compounds 5,9,10,and 14 showed potent activity against Helicobacter pylori with minimum inhibitory concentration(MIC)values in the range of 2.42-36.04μmol/*** secalonic acid D(19)demonstrated signifcant antimicrobial activity against four strains of *** with MIC values in the range of 0.20 to 1.57μmol/***,secalonic acid D(19)exhibited cytotoxicity against cancer cell lines Bel-7402 and HCT-116 with IC_(50) values of 0.15 and 0.19μmol/L,*** structure–activity relationship of depsidone derivatives revealed that the presence of the lactone ring and the hydroxyl at C-10 was crucial to the antimicrobial activity against *** depsidone derivatives are promising leads to inhibit *** and provide an avenue for further development of novel antibiotics.

关键词： Mangrove-derived fungus Talaromyces sp. Depsidone Xanthone Antimicrobial

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Species diversity,taxonomy and phylogeny of Polyporaceae(Basidiomycota)in China

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Fungal diversity 2019年第4期97卷 137-392页

作者： Bao-Kai Cui Hai-Jiao Li Xing Ji Jun-Liang Zhou Jie Song Jing Si Zhu-Liang Yang Yu-Cheng Dai Institute of Microbiology Beijing Forestry UniversityBeijing 100083China Beijing advanced Innovation Center for Tree Breeding by Molecular Design Beijing Forestry UniversityBeijing 100083China National Institute of Occupational Health and Poison Control Chinese Center for Disease Control and PreventionBeijing 100050China Key Laboratory for plant diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesHeilongtanKunming 650201China

Polyporaceae is one of the most important families of *** on the species diversity,taxonomy and phylogeny of Polyporaceae in China are carried *** far 217 species belonging to 42 genera are reported from *** new genera:Amylosporia *** Murinicarpus ***.,twelve new species:Coriolopsis dendriformis ***.,*** ***.,Funalia cystidiata ***.,Haploporus microsporus ***.,Perenniporia citrinoalba ***.,*** ***.,Picipes hainanensis ***.,*** ***.,*** ***.,Trametes duplexa ***.,*** *** *** ***.,and six new combinations,Amylosporia hattorii ***.,Hornodermoporus latissimus ***.,Murinicarpus subadustus ***.,Picipes pumilus ***.,Vanderbylia delavayi *** Vanderbylia robiniophila ***.,are *** the species are described based on the Chinese *** to genera of Polyporaceae occurring in China and keys to species of each genus are *** monograph provides a revised classification of Polyporaceae in China according to the modern *** phylogeny of Polyporaceae from China are reconstructed based on DNA sequences of multiple loci including the internal transcribed spacer(ITS)regions,the large subunit nuclear ribosomal RNA gene(nLSU),the small subunit nuclear ribosomal RNA gene(nSSU),the small subunit mitochondrial rRNA gene sequences(mtSSU),the translation elongation factor 1-αgene(TEF1),theβ-tubulin gene(TBB1),the RNA polymerase II largest subunit(RPB1)and second largest subunit(RPB2)*** addition,full morphological descriptions,illustrations,color photographs,taxonomic notes,ecology and all the available sequences of Polyporaceae species found from China are provided.

关键词： Classification Multi-gene phylogeny Polypore systematics White-rot fungi

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Identification and mapping of Rpi-blb4 in diploid wild potato species Solanum bulbocastanum

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The Crop Journal 2023年第6期11卷 1828-1835页

作者： Jie Li Amanpreet Kaur Brian Harrower Miles Armstrong Daolong Dou Xiaodan Wang Ingo Hein Department of plant Pathology and MOA Key Lab of Pest Monitoring and Green Management College of Plant ProtectionChina Agricultural UniversityBeijing 100193China The James Hutton Institute InvergowrieDundee DD25DAUK University of Dundee Dundee DD14HNUK Crop Research centre TeagascOakParkCarlow R93 XE12Ireland College of plant Protection Academy for Advanced Interdisciplinary StudiesNanjing Agricultural UniversityNanjing 210095JiangsuChina

More than 170 years after causing the potato famine in Ireland,late blight is still considered one of the most devastating crop *** potato breeding efforts depend on natural sources of resistance to protect crops from the rapidly evolving late blight pathogen,Phytophthora *** have identified and mapped a novel broad-spectrum disease resistance gene effective against *** from the wild,diploid potato species Solanum *** resistance gene enrichment sequencing(dRenSeq)was used to confirm the uniqueness of the identified *** and GenSeq-based mapping of the resistance,referred to as Rpi-blb4,alongside recombinant screening,positioned the locus responsible for the resistance to potato chromosome *** interval spans approximately 2.3 Mb and corresponds to the DM reference genome positions of 11.25 and 13.56 Mb.

关键词： Renseq Disease resistance Late blight Solanum bulbocastanum

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Elevational patterns of bird species richness on the eastern slope of ***,Sichuan Province,China

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Avian Research 2019年第1期10卷 1-12页

作者： Xingcheng He Xiaoyi Wang Shane DuBay Andrew Hart Reeve Per Alstrom Jianghong Ran Qiao Liu Yongjie Wu Key Laboratory of Bio-resources and Eco-environment of Ministry of Education College of Life SciencesSichuan University Committee on Evolutionary Biology University of Chicago Life Sciences Section Integrative Research CenterField Museum of Natural History Biosystematics Section Natural History Museum of DenmarkUniversity of Copenhagen Department of Ecology and Genetics Animal EcologyEvolutionary Biology CentreUppsala University Swedish Species Information centre Swedish University of Agricultural Sciences Key Laboratory of Zoological systematics and Evolution Institute of ZoologyChinese Academy of Sciences Institute of Mountain Hazards and Environment Chinese Academy of Sciences

Background:In biological systems,biological diversity often displays a rapid turn-over across *** defining feature has made mountains classic systems for studying the spatial variation in *** patterns of elevational diversity can vary among lineages and mountain systems it remains difficult to extrapolate findings from one montane region to another,or among *** this study,we assessed patterns and drivers of avian diversity along an elevational gradient on the eastern slope of ***,the highest peak in the Hengduan Mountain Range in central China,and a mountain where comprehensive studies of avian diversity are still ***:We surveyed bird species in eight 400-m elevational bands from 1200 to 4400 m *** 2012 and *** test the relationship between bird species richness and environmental factors,we examined the relative importance of seven ecological variables on breeding season distribution patterns:land area(LA),mean daily temperature(MDT),seasonal temperature range(STR),the mid-domain effect(MDE),seasonal precipitation(SP),invertebrate biomass(IB) and enhanced vegetation index(EVI).Climate data were obtained from five local meteorological stations and three temperature/relative humidity smart sensors in ***:A total of 219 bird species were recorded in the field,of which 204 were recorded during the breeding season(April–August).Species richness curves(calculated separately for total species,large-ranged species,and smallranged species) were all ***-ranged species contributed more to the total species richness pattern than small-ranged *** and IB were positively correlated with total species richness and small-ranged species *** and MDT were positively correlated with small-ranged species richness,while STR and SP were negatively correlated with small-ranged species *** was positively correlated with large-ranged species *** we considered the combina

关键词： Mt.Gongga Elevational gradient Environmental factors Species richness Stable microclimate

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The Paleogene to Neogene climate evolution and driving factors on the Qinghai-Tibetan Plateau

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Science China Earth Sciences 2022年第7期65卷 1339-1352页

作者： Jiagang ZHAO Shufeng LI Alexander FARNSWORTH Paul J.VALDES Tammo REICHGELT Linlin CHEN Zhekun ZHOU Tao SU CAS Key Laboratory of Tropical Forest Ecology Xishuangbanna Tropical Botanical GardenChinese Academy of SciencesMengla 666303China University of Chinese Academy of Sciences Beijing 100049China Center of plant Ecology Core Botanical GardensChinese Academy of SciencesMengla 666303China School of Geographical Sciences University of BristolBristol BS8 ISSUK Department of Geosciences University of ConnecticutStorrs CT 06269USA CAS Key Laboratory for plant diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650204China State Key Laboratory of Tibetan Plateau Earth System Environment and Resources(TPESER)Institute of Tibetan Plateau ResearchChinese Academy of SciencesBeijing 100101China

The growth of the Qinghai-Tibetan Plateau(QTP)during the Cenozoic drove dramatic climate and environmental change in this ***,there has been limited comprehensive research into evolution of climate during this *** we present a quantitative reconstruction using Bioclimatic Analysis(BA)and Joint Probability Density Functions(JPDFs)based on data available for 48 fossil floras,including macrofossils and palynological fossils collected in the QTP area from the Paleogene to Neogene(66–2.58 Ma).Both methods indicate that there was an overall decline in temperature and *** simulations using Hadley centre Coupled Model version3(HadCM3)show that the most prominent climate change was very likely driven by QTP orographic evolution from the late Eocene,which was accompanied by a shift in temperature from a latitudinal distribution to a topographically controlled *** addition,with the growth of the QTP,temperature and precipitation decreased gradually in the northeastern part of the *** sources of evidence,including plant fossil records,climate simulations and other proxies,indicate that the topographic evolution of the QTP and other geological events,in conjunction with global cooling,may have been the main factors driving climate change in this *** research can provide insights into Cenozoic environmental change and ecosystem evolution.

关键词： Qinghai-Tibetan Plateau Cenozoic Paleoclimate plant fossil Climate modelling

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Evolution of freshwater Diaporthomycetidae(Sordariomycetes)provides evidence for five new orders and six new families

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Fungal diversity 2021年第2期107卷 71-105页

作者： Kevin D.Hyde Dan-Feng Bao Sinang Hongsanan K.W.Thilini Chethana Jing Yang Nakarin Suwannarach Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Research centre of Microbial diversity and Sustainable Ultilization Chiang Mai UniversityChiang Mai 50200Thailand Innovative Institute of plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225PR China Department of Entomology and plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand College of Agriculture and Biological Sciences Dali UniversityDali 671003YunnanPR China Guangdong Provincial Key Laboratory for plant Epigenetics Shenzhen Key Laboratory of Microbial Genetic EngineeringCollege of Life Science and OceanographyShenzhen UniversityShenzhen 518060China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand

Cancellidium is a remarkable fungal genus which has been collected from wood submerged in freshwater and has unique conidia that are important in dispersal in running *** such a remarkable morphology,one would have expected it to be a distinct family or ***,due to the dearth of molecular evidence in related taxa,this genus has previ-ously been placed in the order Hypocreales,subclass Hypocreomycetidae of *** this study,we made three new collections of this remarkable aquatic genus from streams in China and Thailand,isolated them into culture,extracted DNA and carried out multigene phylogenetic analysis and divergence time estimation which placed the genus in *** is one of the seven subclasses of Sordariomycetes and contains 30 lineages that are only known from *** subclass is therefore of interest when considering the evolution of freshwater *** lineages of Diaporthomycetidae are morphologically unique and taxa cluster with strong support,but have weak support at the base of the *** phylogenetic and MCC trees generated in this study indicate that Aquapteridospora,Barbatosphaeriaceae,Bullimyces,Cancellidium,Ceratolenta,Conlarium,Phialemoniopsis,Pseudostanjehughesia and Rhamphoriaceae are distinct genera/families that evolved in the family/order time *** new orders Barbatosphaeriales(177 MYA),Cancellidiales(137 MYA),Ceratolentales(147 MYA),Conlariales(138 MYA)and Rhamphoriales(133 MYA)and six new families,Aquapteridosporaceae(110 MYA),Cancellidiaceae(137 MYA),Ceratolentaceae(81 MYA),Bullimycetaceae(81 MYA),Phialemoniopsaceae(59 MYA),and Pseudostanjehughesiaceae(111 MYA)are introduced with evidence from phylogenies,divergence estimates and distinct *** these families,Aquapteridosporaceae,Cancellidiaceae,Bullimycetaceae,and Pseudostanjehughesiaceae are only known from freshwater.

关键词： 14 new taxa Evolution Freshwater fungi New family New order

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Species diversity and population density affect genetic structure and gene dispersal in a subtropical understory shrub

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Journal of plant Ecology 2012年第3期5卷 270-278页

作者： Xueqin Zeng Stefan G.Michalski Markus Fischer Walter Durka UFZ-Helmholtz centre for Environmental Research Department of Community Ecology(BZF)Theodor-Lieser-Strasse 4D-06120 HalleGermany Institute of plant Sciences University of BernAltenbergrain 21CH-3013 BernSwitzerland

Aims The dispersal of pollen and seeds is spatially restricted and may vary among plant populations because of varying biotic interactions,population histories or abiotic *** gene dispersal is spatially restricted,it will eventually result in the development of spatial genetic structure(SGS),which in turn can allow insights into gene dispersal ***,we assessed the effect of habitat characteristics like population density and community structure on small-scale SGS and estimate historical gene dispersal at different spatial *** In a set of 12 populations of the subtropical understory shrub Ardisia crenata,we assessed genetic variation at 7 microsatellite loci within and among *** investigated small-scale genetic structure with spatial genetic autocorrelation statistics and heterogeneity tests and estimated gene dispersal distances based on population differentiation and on within-population *** was related to habitat characteristics by multiple *** Findings The populations showed high genetic diversity(He=0.64)within populations and rather strong genetic differentiation(F#ST=0.208)among populations,following an isolation-by-distance pattern,which suggests that populations are in gene flow–drift *** SGS was present within populations(mean Sp=0.027).Population density and species diversity had a joint effect on SGS with low population density and high species diversity leading to stronger small-scale *** of historical gene dispersal from between-population differentiation and from within-population SGS resulted in similar values between 4.8 and 22.9 *** results indicate that local-ranged pollen dispersal and inefficient long-distance seed dispersal,both affected by population density and species diversity,contributed to the genetic population structure of the *** suggest that SGS in shrubs is more similar to that of herbs than to trees and that in communities with

关键词： Ardisia crenata BEF China gene flow habitat effects spatial genetic structure

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Ten decadal advances in fungal biology leading towards human well‑being

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Fungal diversity 2022年第5期116卷 547-614页

作者： Ausana Mapook·Kevin DHyde Kevin D.Hyde Khadija Hassan Blondelle Matio Kemkuignou Adela Cmokova Frank Surup Eric Kuhnert Pathompong Paomephan Tian Cheng Sybren de Hoog Yinggai Song Ruvishika S.Jayawardena Abdullah M.S.Al‑Hatmi Tokameh Mahmoudi Nadia Ponts Lena Studt‑Reinhold Florence Richard‑Forget K.W.Thilini Chethana Dulanjalee L.Harishchandra Peter E.Mortimer Huili Li Saisamorm Lumyong Worawoot Aiduang Jaturong Kumla Nakarin Suwannarach Chitrabhanu S.Bhunjun Feng‑Ming Yu Qi Zhao Doug Schaefer Marc Stadler Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department Microbial Drugs Helmholtz Centre for Infection Research(HZI)and German Centre for Infection Research(DZIF)Partner Site Hannover‑BraunschweigInhoffenstrasse 738124 BrunswickGermany Institute of Microbiology Technische Universitat BraunschweigSpielmannstrase 738106 BrunswickGermany Laboratory of Fungal Genetics and Metabolism Institute of MicrobiologyCzech Academy of SciencesPragueCzech Republic centre of Biomolecular Drug Research(BMWZ) Institute for Organic ChemistryLeibniz University HannoverSchneiderberg 3830167 HannoverGermany Department of Biotechnology Faculty of ScienceMahidol University272 Rama VI RoadRatchathewiBangkok 10400Thailand Center of Expertise in Mycology Radboud University Medical Center/Canisius Wilhelmina HospitalNijmegenThe Netherlands Key Laboratory of Environmental Pollution Monitoring and Disease Control Guizhou Medical UniversityGuiyangChina Microbiology Parasitology and Pathology Graduate ProgramFederal University of ParanaCuritibaBrazil Department of Dermatology Peking University First HospitalPeking UniversityBeijingChina Natural and Medical Sciences Research Center University of NizwaNizwaOman Department of Biochemistry Erasmus University Medical CenterRotterdamThe Netherlands INRAE UR1264 Mycology and Food Safety(MycSA)33882 Villenave d’OrnonFrance Department of Applied Genetics and Cell Biology Institute of Microbial GeneticsUniversity of Natural Resources and Life SciencesVienna(BOKU)Tulln an der DonauAustria Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China Institute of Plant ProtectionBeijing Academy of Agriculture and Forestry SciencesBeijing 100097China Key Laboratory for plant diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina centre for Mountai

Fungi are an understudied resource possessing huge potential for developing products that can greatly improve human *** the current paper,we highlight some important discoveries and developments in applied mycology and interdisciplinary Life Science *** examples concern recently introduced drugs for the treatment of infections and neurological diseases;application of–OMICS techniques and genetic tools in medical mycology and the regulation of mycotoxin production;as well as some highlights of mushroom cultivaton in *** for new diagnostic tools in medical mycology and the exploitation of new candidates for therapeutic drugs,are also *** addition,two entries illustrating the latest developments in the use of fungi for biodegradation and fungal biomaterial production are *** other areas where there have been and/or will be significant developments are also *** is our hope that this paper will help realise the importance of fungi as a potential industrial resource and see the next two decades bring forward many new fungal and fungus-derived products.

关键词： Biomaterial CRISPR Drug development Morel cultivation Mushroom cultivation Mycotoxin biosynthesis Plastic degradation

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Development of Soybean EST-SSR Markers and Their Use to Assess Genetic diversity in the Subgenus Soja

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Agricultural Sciences in China 2010年第10期9卷 1423-1429页

作者： LIU Yu-lin LI Ying-hui ZHOU Guo-an Uzokwe N CHANG Ru-zhen CHEN Shou-yi QIU Li-juan The National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI)/Key Laboratory of Germplasm Utilization Ministry of Agricuhure/lnstitute of Crop Sciences Chinese Academy of Agricultural Sciences Beijing 100081 P.R. China plant Gene Research centre National Key Laboratory of Plant Genomics/Institute of Genetics and Developmental Biology Chinese Academy of Sciences Beijing 100101 P.R. China

Developing expressed sequence tag-derived SSR （EST-SSR） markers is imperative in genetic research. In this paper, we reported 37 EST-SSR markers which were developed from 286 unigenes obtained from soybean cDNA library. Among the 286 markers designed for the 4 accessions of Glycine max and 6 of its wild progenitor （G. soja） within the subgenus Soja, 209 markers amplified DNA fragments, taking 73.1% and 37 markers appeared to be polymorphic, which was 12.9% of the total. The 37 loci detected a total of 142 alleles, while the PIC values varied from 0.194 to 0.794. Both the number of alleles per locus and PIC value were significantly related to the SSR motif. Six EST-SSR loci may be fixed for different alleles between G. max and G. soja since they were particularly polymorphic among the 6 G. soja accessions. A neighbor-joining tree placed the G. max accessions together as a group within the G. soja, though the average genetic distance among G. soja accessions was much higher. These new EST-SSRs markers will be useful for genetic diversity analysis, genetic mapping construction and gene discovery in Soja subgenus.

关键词： EST-SSR diversity Soja subgenus

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Species-area relationship within and across functional groups at alpine grasslands on the northern Tibetan Plateau,China

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Journal of Mountain Science 2016年第2期13卷 265-275页

作者： ZHOU Nan WU Jian-shuang SHEN Zhen-xi ZHANG Xian-zhou YANG Peng-wan Lhasa National Ecological Research Station Key Laboratory of Ecosystem Network Observation and ModellingInstitute of Geographic Sciences and Natural Resources ResearchChinese Academy of sciences University of Chinese Academy of Sciences Functional Biodiversity Dahlem Centre of Plant SciencesFree University of Berlin

The species-area relationship （SAR） is one of the most fundamental concepts in community ecology and is helpful for biodiversity conservation. However, few studies have systematically addressed this topic for different alpine grassland types on the Tibetan Plateau, China. We explored whether the plant composition of different functional groups affects the manner in which species richness inereases with increasing area at scales ≤ 1.0 m^2. We also compared species richness （S） within and across forbs, legumes, sedges and grasses, with sampling subplot area （A） increasing from 0.0625 m^2 to 1.0 m^2 between alpine meadow and steppe communities. We applied a logarithmic function （S = b0 ＋ b1 ln A） to determine the slope and intercept of SAR curves within and across functional groups. The results showed that the logarithmic relationship holds true between species richness and sampling area at these small scales. Both the intercept and slope of the logarithmic forbs-area curves are significantly higher than those for the three other functional groups （P 〈 0.05）. Forb accounts for about 91.9 % of the variation in the intercept and 75.0% of the variation in the slope of the SAR curve when all functional groups＇ data were pooled together. Our results indicated that the different SAR patterns should be linked with species dispersal capabilities, environmental filtering, and life form composition within alpine grassland communities. Further studies on the relationship between species diversity and ecosystem functions should specify the differential responses of different functional groups to variations in climate and anthropogenic disturbances.

关键词： Changtang Nature Reserve Complementary response plant functional groups plant life forms Species coexistence

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