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Conservation genomic investigation of an endangered conifer,Thuja sutchuenensis,reveals low genetic diversity but also low genetic load

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Plant Diversity 2024年第1期46卷 78-90页

作者： Tongzhou Tao Richard IMilne Jialiang Li Heng Yang Shiyang Wang Sihan Chen Kangshan Mao Key Laboratory for Bio-Resource and Eco-Environment of Ministry of Education&Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station College of Life ScienceSichuan UniversityChengduChina Institute of Molecular Plant science School of Biological ScienceUniversity of EdinburghEdinburgh EH93BFUK College of science Tibet UniversityLhasa 850000Xizang Autonomous RegionPR China

Endangered species generally have small populations with low genetic diversity and a high genetic *** sutchuenensis is an endangered conifer endemic to southwestern *** was once considered extinct in the wild,but in 1999 was ***,little is known about its genetic *** collected 67 individuals from five wild,isolated *** populations,and used 636,151 SNPs to analyze the level of genetic diversity and genetic load in *** to delineate the conservation units of ***,based on whole transcriptome sequencing data,as well as target capture sequencing *** found that populations of *** could be divided into three *** groups had low levels genetic diversity and were moderately genetically *** findings also indicate that *** suffered two severe bottlenecks around the Last Glaciation Period and Last Glacial *** Thuja species,*** presented the lowest genetic load and hence might have purged deleterious mutations efficiently through purifying ***,distribution of fitness effects analysis indicated a high extinction risk for *** lines of evidence identified three management units for *** *** possesses a low genetic load,low genetic diversity,suboptimal fitness,and anthropogenic pressures all present an extinction risk for this rare *** might also hold true for many endangered plant species in the mountains all over the world.

关键词： Sichuan Arborvitae Genetic load Deleterious mutations Demographic history Conservation genomics

Structural changes in the conversion of an Arabidopsis outward-rectifying K+channel into an inward-rectifying channel

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Plant Communications 2024年第6期5卷 5-8页

作者： Xudong Gao Xia Xu Tengfei Sun Yuhan Lu Yutian Jia Jiaqi Zhou Peng Fu Yanming Zhang Guanghui Yang State Key Laboratory of Plant Environmental Resilience Frontiers Science Center for Molecular Design BreedingDepartment of Nutrition and HealthCollege of Biological SciencesChina Agricultural UniversityBeijing 100193China

Dear Editor,By using cryo-electron microscopy and electrophysiology,this study characterizes the structural and functional dynamics of the K+outward-rectifying channel SKOR in Arabidopsis and the structural changes associated with a double mutation that transforms SKOR into an inward-rectifying K+channel,*** findings have implications for understanding and manipulating crop K+nutrition.

关键词： channel Arabidopsis changes

Eco-friendly high-throughput screening of cephalosporins impurities: Utilizing 2D-carbon microfiber fractionation system combined with quadrupole time of flight high-resolution mass spectrometer

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Journal of Pharmaceutical Analysis 2024年第5期14卷 772-774页

作者： Lei Yang Yan Wang Zhao Wang Meiyu Cui Ruolan Jin Hai-Bo Shang Donghao Li College of Pharmacy Yanbian UniversityYanjiJilin133002China Department of Chemistry Interdisciplinary Program of Biological Functional MoleculesCollege of Integration ScienceYanbian UniversityYanjiJilin133002China

Owing to its high sensitivity,selectivity,and accuracy,liquid chromatography coupled with mass spectrometry(LC-MS)is commonly employed to screen,confirm,and quantify impurities in drugs[1].However,LC-MS has certain drawbacks such as complicated pretreatment steps,long analysis time,large consumption of organic solvents,high maintenance costs,and,most notably,the need for high-pressure pumps and compatible hardware because of the high column backpressure[2].In this study,a two-dimensional(2D)microscale carbon fiber(CF)/active carbon fiber(ACF)system combined with a quadrupole time-of-flight high-resolution mass spectrometry(2DmCFs-QTOF-HRMS)system was developed to rapid screening impurities in the typical three generations of oral cephalosporins,i.e.,cephalexin tablets(CPXTs),cefuroxime axetil tablets(CFATs),and cefixime tablets(CFXTs)(Fig.S1).The“fuzzy chromatographic separation”sample pretreatment method separates complex samples into high-,medium-,and weak-polar fractions for successive detection of MS,achieving effective reduction of the ion suppression effect in electrospray ionization(ESI)-MS and improving the MS detection *** to high performance liquid chromatography(HPLC)-MS,this method has distinct advantages such as less organic solvent consumption(1.5 mL),shorter separation and analysis times(5 min),more information on impurities,and high reproducibility.

关键词： system carbon tablets

Progress and prospects of chiral nanomaterials for biosensing platforms

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Rare Metals 2024年第6期43卷 2469-2497页

作者： Yu-Cheng Ouyang Bong-Jun Yeom Yuan Zhao Wei Ma School of Food science and Technology State Key Laboratory of Food Science and ResourcesJiangnan UniversityWuxi 214122China Key Laboratory of Synthetic and biological Colloids Ministry of EducationSchool of Chemical and Material EngineeringJiangnanUniversityWuxi214122China Department of Chemical Engineering Hanyang UniversitySeoul04763RepublicofKorea

Chiral nanomaterials have distinct chiroptical properties of preferential interactions to circularly polarized ***-based biosensors have emerged for detection of biomolecules,ions and cells in recent *** review provides an extensive overview of biosensors based on chiral nanomaterials,starting with approaches to chiral nanomaterials construction in terms of fabrication *** of chiral nanomaterials and their biosensor applications is presented for different material types,with special emphasis on the role and importance of material properties and signal generation in *** assessed the technological prospects of the emerging fields of chiral construction,circularly polarized luminescence,Raman optical activity and so on along with their current *** venues for future research on chiral nanomaterials in fabrication,biosensing,disease diagnosis and treatment are also presented in the review.

关键词： Chiral nanomaterials Circular dichroism Biosensors

Dual metal ions/BNQDs boost PMS activation over copper tungstate photocatalyst for antibiotic removal:Intermediate,toxicity assessment and mechanism

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Journal of Materials science & Technology 2024年第3期170卷 11-24页

作者： Ruyao Chen Haiyue Zhang Yuming Dong Haifeng Shi School of science Jiangnan UniversityWuxi214122China The Key Laboratory of Synthetic and biological Colloids Ministry of EducationJiangnan UniversityWuxi214122China National Laboratory of Solid State Microstructures Nanjing UniversityNanjing210093China

In the metal-based peroxymonosulfate(PMS)activation process,the sluggish surface redox cycle of metal ions generally hampered the efficiency of PMS activation for pollutant ***,Codoped CuWO 4/BN quantum dots(CW/Co/BNQDs)photocatalysts were developed to realize Cu^(2+)/Cu+and Co^(2+)/Co^(3+)dual ions redox cycles for PMS activation,which would facilitate the tetracycline(TC)***/4Co/2BNQDs could degrade 94.8%TC within 30 min in PMS/Vis system,and the apparent rate constant of CW/4Co/2BNQDs was 2.7 times and 1.2 times higher than those of CW and CW/4Co,*** improved TC degradation performance could be attributed to the synergetic effect between BNQDs and dual redox cycles.X-ray photoelectron spectroscopy(XPS)spectra of samples before and after the reaction demonstrated that BNQDs were beneficial for accelerating the Cu^(2+)/Cu+and Co^(2+)/Co^(3+)redox cycles in CW/4Co/2BNQDs,further boosting the activation of PMS in TC *** of different radical scavengers revealed that the SO_(4)^(·−)/·OH/h+/^(1)O_(2)reactive species participated in the PMS activation for the TC degradation *** possible TC degradation pathway and intermediate toxicity were detailed *** addition,CW/4Co/2BNQDs exhibited outstanding photocatalytic activity over five consecutive cycles,which illustrated that it was supposed to be a reliable PMS activator over antibiotic elimination for practical *** this work shed new light on constructing dual redox cycles for efficient PMS activation.

关键词： Dual redox cycles Photocatalysis Peroxymonosulfate BN quantum dots Toxicity assessment

Lactobacillus plantarum 104 Cell-freesupernatant improved bile acid metabolism by regulating gut microbiota of high-fat diet mice

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Food science and Human Wellness 2024年

作者： Xia Li Shanshan Wei Ruixue Zhao Yue Zhang Zixin Gao Zhanpeng Wang Yu Wang Bo Nan Yuhua Wang College of Food science and Engineering and Jilin Province Innovation Center for Food biological Manufacture， Jilin Agricultural University

Lactiplantibacillusplantarum 104， which was previously screened in the laboratory， has been confirmed to have the effect of lowering lipids and regulating intestinal microbial homeostasis. However， the mechanism of action of its fermentation supernatant in alleviating metabolic disorders is ***104 cell-freesupernatant (LP104s) was fed to high-fat C57BL/6N mice for 8 weeks. The intervention of LP104s increased the concentration of conjugated bile acids in the ileum， especially taur-α/β-muricholic acid sodium salt (T-α-MCA or T-β-MCA)， inhibited intestinal farnesoid X receptor (FXR)-related signaling pathways. LP104s reduced cholesterol levels by increasing the synthesis of hepatic cholic acid (CA)， chenodeoxycholic acid (CDCA)， and the excretion of bile acids in feces. Moreover， western blotting results showed that TLR2/NF-?B signaling pathway expression was inhibited. In addition， 16S rDNA sequencing results showed that LP104s regulated the relative abundance of bacteria associated with inflammatory response and obesity (Prevotella， Ruminococcus， and Clostridium). Therefore， this paper further elaborates the role of gut microbiology and bile acids in improving metabolism from the perspective of secondary bile acids and intestinal chronic inflammation and also lays a theoretical foundation for the next step in the development of fermentation products of this strain.

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Effects of long-term fencing on soil microbial community structure and function in the desert steppe,China

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Journal of Arid Land 2024年第3期16卷 431-446页

作者： PAN Yaqing KANG Peng QU Xuan RAN Yichao LI Xinrong Shapotou Desert Research and Experiment Station Northwest Institute of Eco-Environment and ResourcesChinese Academy of SciencesLanzhou 730000China School of biological science and Engineering North Minzu UniversityYinchuan 750021China

One of the goals of grazing management in the desert steppe is to improve its ***,relatively little is known about soil microbe communities in the desert steppe ecosystem under grazing *** this study,we investigated the diversity and aboveground biomass of Caragana korshinskii *** communities in long-term fencing and grazing areas,combined with an analysis of soil physical-chemical properties and genomics,with the aim of understanding how fence management affects plant-soil-microbial inter-relationships in the desert steppe,*** results showed that fence management(exclosure)increased plant diversity and aboveground biomass in *** shrub area and effectively enhanced soil organic carbon(233.94%),available nitrogen(87.77%),and available phosphorus(53.67%)*** well,the Shannon indices of soil bacteria and fungi were greater in the fenced ***-soil changes profoundly affected the alpha-and beta-diversity of soil *** management also altered the soil microbial community structure,significantly increasing the relative abundances of Acidobacteriota(5.31%-8.99%),Chloroflexi(3.99%-5.58%),and Glomeromycota(1.37%-3.28%).The soil bacterial-fungal co-occurrence networks under fence management had higher complexity and *** on functional predictions,fence management significantly increased the relative abundance of bacteria with nitrification and nitrate reduction functions and decreased the relative abundance of bacteria with nitrate and nitrite respiration *** relative abundances of ecologically functional fungi with arbuscular mycorrhizal fungi,ectomycorrhizal fungi,and saprotrophs also significantly increased under fence *** addition,the differential functional groups of bacteria and fungi were closely related to plant-soil *** results of this study have significant positive implications for the ecological restoration and reconstruction of dry desert steppe and simila

关键词： desert steppe fence management Caragana korshinskii soil physical-chemical property soil microorganism

Evolution of hollow nanosphere to microtube in the self-assembly of chiral dansyl derivatives and inversed circularly polarized luminescence

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Chinese Chemical Letters 2024年第7期35卷 285-290页

作者： Sifan Du Yuan Wang Fulin Wang Tianyu Wang Li Zhang Minghua Liu Beijing Key Laboratory for science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical EngineeringSchool of Chemistry and Biological EngineeringUniversity of Science and Technology BeijingBeijing 100083China National Laboratory for Molecular science(BNLMS) CAS Key Laboratory of ColloidInterface and Chemical ThermodynamicsInstitute of ChemistryChinese Academy of SciencesBeijing 100190China

Here,we designed asymmetric(m DS)and symmetrical(d DS)chiral V-shaped molecules by linking one or two dansyl groups to trans-1,2-cyclohexane diamine and investigated the solvent-regulated structural transformation and inversed circularly polarized luminescence(CPL)in the *** increasing water volume fraction(fw)in the mixed solvent of water/acetonitrile,asymmetric mDS selfassembled into hollow nanospheres and microtubes,while solid nanospheres and solid microplates were corresponding to symmetric d *** this transformation process,the emission of m DS and d DS was changed from yellow-green to blue and cyan color,which was ascribed to twisted intramolecular charge transfer(TICT)and locally excited(LE)fluorescence of V-shaped DS *** conformation of N,Ndimethyl groups with respect to naphthalene ring also led to the transformation of *** tubular and platelike structures had stronger and reversed CPL signals in comparison with spheroidal *** chiral information of DS assembly could be effective transferred to achiral Nile red via co-assembly strategy,which endowed Nile red exhibiting inversed induced CPL signal regulated by water *** work provides a method for achieving a variety of self-assembled structures with adjustable chiroptical properties.

关键词： CPL inversion Hollow structure Self-assembly Dansyl Chirality transfer

Engineered exosome hybrid copper nanoscale antibiotics facilitate simultaneous self-assembly imaging and elimination of intracellular multidrug-resistant superbugs

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Chinese Chemical Letters 2024年第7期35卷 319-324页

作者： Zengchao Guo Weiwei Liu Tengfei Liu Jinpeng Wang Hui Jiang Xiaohui Liu Yossi Weizmann Xuemei Wang State Key Laboratory of Digital Medical Engineering School of Biological Science and Medical EngineeringSoutheast UniversityNanjing 210096China Department of Chemistry Ben-Gurion University of the NegevBeer-Sheva 8410501Israel

With the increasing emergence of bacterial infections,especially multidrug-resistant(MDR)bacteria,poses an urgent *** study demonstrated a novel multifunctional nanotheranostics platform developed by the strategic integration of both in-situ bio-assembly imaging and target bacteria *** the introduction of copper ions into bacteria,the Cu^(2+)could spontaneously bio-selfassembled into a multifunctional copper nanoclusters(NCs)which efficiently enhanced epigallocatechin gallate(EGCG)uptake into *** visualizing the bacteria,the developed theranostic nanoplatform exhibited highly efficient disinfection activities with negligible side effects as reflected by higher cell viability and insignificant hemolytic ***,the exosomal formulation of EGCG integrated with Cu^(2+)showed an increased intracellular antibacterial activity,which could eliminate most of the methicillin-resistant Staphylococcus aureus(MRSA)phagocytosed by macrophages,guide macrophages toward M2-like phenotype polarization and alleviate inflammation,without exhibiting obvious cytotoxicity on host *** regimen could be viewed as an effective strategy for the sterilization of intractable bacterial infections.

关键词： In situ self-assembled Exosome Antibacterial agents Bioimaging Intracellular infection