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Implementation of a particle-in-cell method for the energy solver in 3D spherical geodynamic modeling

Earth and Planetary Physics 2024年第3期8卷 549-563页

作者： Hao Dong ZeBin Cao LiJun Liu YanChong Li SanZhong Li LiMing Dai XinYu Li Frontiers science Center for Deep Ocean Multispheres and Earth System Key Laboratory of Submarine Geosciences and Prospecting TechniquesMinistry of Education and College of Marine GeosciencesOcean University of ChinaQingdao 266100China State Key laboratory of Lithospheric Evolution Institute of Geology and GeophysicsChinese Academy of SciencesBeijing 100029China laboratory for marine Geology Laoshan LaboratoryQingdao 266237China Department of Earth science&Environmental Change University of Illinois at Urbana-ChampaignUrbanaIL 61801USA laboratory of Seismology and Physics of Earth’s Interior School of Earth and Space SciencesUniversity of Science and Technology of ChinaHefei 230026China

The thermal evolution of the Earth’s interior and its dynamic effects are the focus of Earth ***,the commonly adopted grid-based temperature solver is usually prone to numerical oscillations,especially in the presence of sharp thermal gradients,such as when modeling subducting slabs and rising *** phenomenon prohibits the correct representation of thermal evolution and may cause incorrect implications of geodynamic *** examining several approaches for removing these numerical oscillations,we show that the Lagrangian method provides an ideal way to solve this *** this study,we propose a particle-in-cell method as a strategy for improving the solution to the energy equation and demonstrate its effectiveness in both one-dimensional and three-dimensional thermal problems,as well as in a global spherical simulation with data *** have implemented this method in the open-source finite-element code CitcomS,which features a spherical coordinate system,distributed memory parallel computing,and data assimilation algorithms.

关键词： numerical oscillation overshooting and undershooting particle-in-cell method three-dimensional spherical geodynamic modeling energy solver finite element method

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Genetic source,migration and accumulation of helium under deep thermal fluid activities:A case study of Ledong diapir area in Yinggehai Basin,South China Sea

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Petroleum Exploration and Development 2024年第3期51卷 753-766页

作者： FENG Ziqi HAO Fang HU Lin HU Gaowei ZHANG Yazhen LI Yangming WANG Wei LI Hao XIAO Junjie TIAN Jinqiang State Key laboratory of Deep Oil and Gas China University of Petroleum(East China)Qingdao 266580China School of Geosciences China University of Petroleum(East China)Qingdao 266580China laboratory for marine Mineral Resources Qingdao Marine Science and Technology CenterQingdao 266237China Hainan Branch of CNOOC(China)Co. Ltd.Haikou 570312China

Based on the geochemical parameters and analytical data,the heat conservation equation,mass balance law,Rayleigh fractionation model and other methods were used to quantify the in-situ yield and external flux of crust-derived helium,and the initial He concentration and thermal driving mechanism of mantle-derived helium,in the Ledong Diapir area,the Yinggehai Basin,in order to understand the genetic source,migration and accumulation mechanisms of helium under deep thermal fluid *** average content of mantle-derived He is only 0.0014%,the ^(3)He/^(4)He value is(0.002–2.190)×10^(−6),and the R/Ra value ranges from 0.01 to 1.52,indicating the contribution of mantle-derived He is 0.09%–19.84%,while the proportion of crust-derived helium can reach over 80%.Quantitative analysis indicates that the crust-derived helium is dominated by external input,followed by in-situ production,in the Ledong diapir *** crust-derived helium exhibits an in-situ 4 He yield rate of(7.66–7.95)×10^(−13)cm^(3)/(a·g),an in-situ 4 He yield of(4.10–4.25)×10^(−4)cm^(3)/g,and an external 4 He influx of(5.84–9.06)×10^(−2)cm^(3)/*** results may be related to atmospheric recharge into formation fluid and deep rock-water *** ratio of initial mole volume of 3 He to enthalpy(W)is(0.004–0.018)×10^(−11) cm^(3)/J,and the heat contribution from the deep mantle(X_(M))accounts for 7.63%–36.18%,indicating that deep hot fluid activities drive the migration of mantle-derived 3 *** primary helium migration depends on advection,while the secondary migration is controlled by hydrothermal degassing and gas-liquid *** deep to shallow layers,the CO_(2/3) He value rises from 1.34×10^(9)to 486×10^(9),indicating large amount of CO_(2)has *** the influence of deep thermal fluid,helium migration and accumulation mechanisms include:deep heat driven diffusion,advection release,vertical hydrothermal degassing,shallow lateral migration,accumulation in traps far from faults,

关键词： deep thermal fluid helium genetic source migration and accumulation mechanism Yinggehai Basin

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Productivity in the Southern Ocean Antarctic Zone during the Northern Hemisphere Glaciation(NHG)and its link to atmospheric pCO_(2)

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science China Earth sciences 2024年第7期67卷 2242-2252页

作者： Yiming WU Jingteng GUO Xiangyu ZHAO Wenshen XIAO Heng LIU Zhifang XIONG Tiegang LI Key laboratory of marine Geology and Metallogeny First Institute of OceanographyMinistry of Natural ResourcesQingdao 266061China laboratory for marine Geology Laoshan LaboratoryQingdao 266237China School of Oceanography Shanghai Jiao Tong UniversityShanghai 200030China Key laboratoryof Polar Ecosystem and Climate Change Shanghai Jiao Tong UniversityMinistry of EducationShanghai 200030China State Key laboratory of marine Geology Tongji UniversityShanghai 200092China

A decrease in atmospheric CO_(2)partial pressure(pCO_(2))is considered an important prerequisite for the onset and intensification of Northern Hemisphere Glaciation(NHG).However,how the ocean sequestered missing CO_(2)during the NHG is still *** in surface productivity and deep ventilation in the Southern Ocean(SO)have been proposed to explain the variations in atmospheric pCO_(2)over the last eight glacial cycles,but it is unclear whether these mechanisms contributed to the decrease in atmospheric pCO_(2)during the *** titanium-normalized contents and mass accumulation rates of biogenic opal and total organic carbon from the International Ocean Discovery Program(IODP)Expedition 374 Site U1524A,we reconstruct the productivity in the Ross Sea,Antarctica,from 3.3 Ma to 2.4 *** productivity records exhibit a long-term decreasing trend and several distinct phased evolutionary ***,the local productivity fluctuated dramatically during 3.3-3.0 Ma,decreased gradually during 3.0-2.6 Ma,and remained relatively constant during 2.6-2.4 *** comparing productivity with its potential influences,we infer that the phased and long-term evolutions of productivity were mainly controlled by changes in deep ocean *** ice expansion might have decreased productivity during 3.3-3.0 Ma by light *** in eolian dust input have little effect on *** analysis revealed no coupling linkage between productivity and atmospheric pCO_(2),indicating that the productivity in the SO Antarctic Zone(AZ)was not the main factor controlling the atmospheric CO_(2)decrease during the *** improve our understanding of the role of SO processes in the NHG,further studies should focus on the potential influences of deep ocean ventilation on atmospheric pCO_(2)in the AZ,and similar studies should also be extended to the sea area in the Subantarctic Zone.

关键词： Ross Sea Biogenic opal Total organic carbon Deep ocean ventilation Sea ice Ocean carbon cycle

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Rational design of robust and transparent superrepellent surfaces for long-term marine antifouling

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science China(Technological sciences) 2024年第7期67卷 2031-2039页

作者： CHEN Hui WANG Zhi WANG DaHeng XIAO Feng FU Guang-En BU XueLing ZHAO Lei ZHANG Tao WU DaHeng PU JiBin The State Key laboratory of Refractories and Metallurgy Wuhan University of Science&TechnologyWuhan 430081China Key laboratory of Advanced marine Materials Ningbo Institute of Materials Technology and EngineeringChinese Academy of SciencesNingbo 315201China

Superhydrophobic surfaces have demonstrated exceptional efficacy in combatting biofouling contaminations of optical devices and equipment in marine applications. However, the fabrication of highly transparent superhydrophobic materials remains a formidable challenge due to the inherent trade-off between surface roughness for superhydrophobicity and optical ***, we design a robust and transparent superhydrophobic coating(Si-POSS) embedded silica nanoparticles(200 nm) with fluorinated polyhedral oligomeric silsesquioxanes(F-POSS) and zinc pyrithione(ZPT). The Si-POSS coating exhibits excellent water repellence toward diverse liquids and optical transmittance exceeding 90% in the visible spectrum. Moreover, the Si-POSS coating sustains long-term anti-bacterial(> 99.11%) and anti-algal effects for over 30 days, accompanied by mechanical,chemical, and thermal stability. This research asserts that the Si-POSS coating with outstanding combined characteristics holds significant potential for marine applications, particularly in self-cleaning and antifouling endeavors.

关键词： superhydrophobic surface transparent marine antifouling nanoparticles

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Evolution and Application of Sealing Ability of Gypsum Caprocks under Temperature-Pressure Coupling:An Example of the ZS5 Well in the Tazhong Area of the Tarim Basin

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Acta Geologica Sinica(English Edition) 2024年第1期98卷 168-184页

作者： LIU Hua ZHAO Shan YANG Xianzhang ZHU Yongfeng WANG Shen ZHANG Ke National Key laboratory of Deep Oil and Gas China University of Petroleum(East China)QingdaoShandong 266580China School of Geosciences China University of Petroleum(East China)QingdaoShandong 266580China laboratory for marine Mineral Resources National Laboratory for Marine Science and TechnologyQingdaoShandong 266071China PetroChina Tarim Oil Field Company KorlaXinjiang 841001China

Gypsum caprocks'sealing ability is affected by temperature-pressure *** to the limitations of experimental conditions,there is still a lack of triaxial stress-strain experiments that simultaneously consider changes in temperature and pressure conditions,which limits the accuracy of the comprehensive evaluation of the brittle plastic evolution and sealing ability of gypsum rocks using temperature pressure *** stress-strain tests were utilized to investigate the differences in the evolution of the confinement capacity of gypsum rocks under coupled temperaturepressure action and isothermal-variable pressure action on the basis of sample feasibility *** to research,the gypsum rock's peak and residual strengths decrease under simultaneous increases in temperature and pressure over isothermal pressurization experimental conditions,and it becomes more *** reduces the amount of time it takes for the rock to transition from brittle to *** temperature is taken into account,both the brittle–plastic transformation's depth limit and the lithological transformation of gypsum rocks become shallower,and the evolution of gypsum rocks under variable temperature and pressure conditions is more complicated than that under isothermal *** sealing ability under the temperature-pressure coupling is more in line with the actual geological context when the application results of the Well#ZS5 are *** provides a theoretical basis for precisely determining the process of hydrocarbon accumulation and explains why the early hydrocarbon were not well preserved.

关键词： temperature-pressure coupling gypsum caprocks brittle-plastic evolution sealing capacity Tarim Basin

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Combined effects of massive reclamation and dredging on the variations in hydrodynamic and sediment transport in Lingdingyang Estuary,China

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Frontiers of Earth science 2024年第1期18卷 127-147页

作者： Kanglin CHEN Yitong LIN Jing LIU Zixiao HE Liangwen JIA School of Geography and Remote Sensing Guangzhou UniversityGuangzhou 510006China School of marine science Sun Yat-Sen UniversityGuangzhou 510275China School of marine Engineering and Technology Sun Yat-Sen UniversityGuangzhou 510275China Southern marine science and Engineering Guangdong Laboratory(Zhuhai)Zhuhai 519080China Guangdong Province Engineering Research Center of Coasts Islands and ReefsGuangzhou 510275China

Anthropogenic disturbances associated with the rapid development of coastal cities have drastically influenced the hydrodynamics and sediment transport processes in many large estuaries *** Estuary(LE),located in the central and southern part of the Pearl River Delta,southern China with a long history of high-intensity anthropogenic disturbances,was studied to explore the contribution rate and mechanism underlying the alteration in hydrodynamics and sediment transport under each phase of human activity.A state-of-the-art modeling tool(TELEMAC-2D),was used to study the variations in the hydrodynamics and sediment transport,accounting for reclamation-induced shoreline and dredging-induced topography *** results indicated that:i)under the influence of successive land reclamation,the general distribution of the Confluence Hydrodynamic Zone(CHZ)in LE varied from scattered to concentrated,and these zones moved 3–5 km ***)Large-scale channel dredging weakened the residual flow in LE,decreasing the residual flow in the Inner-Lingding Estuary(ILE)by 62.45%.This was initiated by the enhancement of tidal dynamics through changes in the bottom friction caused by dredging in the *** contrast,massive reclamation decreased the residual flow in the ILE by 17.55%and increased that in the Outer-Lingding Estuary(OLE).iii)Despite disturbances related to land reclamation and dredging,the estuarine jet flow in LE remained a turbulent jet system,and the estuarine jet flow became more *** addition,the position of the estuarine jet source moved 6–13 km ***)Both reclamation and dredging decreased the SSC in the ILE and increased the SSC in the *** weakened the SSC in the ILE by 62.19%,whereas dredging enhanced the SSC in the OLE by 49%.Spatially,reclamation resulted in an increase in the SSC near the outlets and a decrease in the SSC in the northern portion of the Western *** mainly increased the SSC in the north

关键词： reclamation and dredging estuarine jet flow dynamics and sediment transport mechanism Lingdingyang Estuary

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Pyridapeptides F–I,cyclohexapeptides from marine sponge-derived Streptomyces ***-4539

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Chinese Chemical Letters 2024年第7期35卷 341-344页

作者： Shuige Zhao Pengcheng Yan Peipei Liu Haishan Liu Ning Li Peng Fu Weiming Zhu Key laboratory of marine Drugs Ministry of Education of ChinaSchool of Medicine and PharmacyOcean University of ChinaQingdao 266003China Key laboratory for marine Drugs and Bioproducts Laoshan LaboratoryQingdao 266237China School of Biological science and Technology University of JinanJi'nan 250022China Key laboratory for Biosensors of Shandong Province Biology InstituteQilu University of TechnologyJi'nan 250103China

Four new cyclohexapeptides,pyridapeptides F–I(1–4),were isolated from the fermentation broth of marine sponge-derived Streptomyces *** pyridapeptides F–H(1–3)are composed ofβ-hydroxyleucine,alanine,O-methylthreonine,hexahydropyridazine-3-carboxylic acid,5-hydroxytetrahydropyridazine-3-carboxylic acid,and(2S,3R,4E,6E)-2-amino-3–hydroxy-4,6-dienoic acid *** I(4)contains(2S,3R,4E,6E)-2-amino-3–hydroxy-8-methylnona-4,6-dienoic acid residue and a very rare glycose residue,*** structures were determined based on spectroscopic analysis and chemical *** G–I(2–4)have the 2,3,6-trideoxyhexose units glycosylated at theγ-OH-TPDA residue,displayed significant antiproliferative activity against four(PC9,MKN45,Hep G2,K562)or two(PC9,MKN45)human cancer cell lines.

关键词： marine microorganism Streptomyces Cyclopeptide glycosides Pyridapeptides Antiproliferative activity

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Bactericidal ability of target acidic phospholipids and phagocytosis of CDC42 GTPase-mediated cytoskeletal rearrangement underlie functional conservation of CXCL12 in vertebrates

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science China Life sciences 2024年

作者： Yanqi Zhang Ning Xia Yazhen Hu Wentao Zhu Chunrong Yang Jianguo Su Hubei Hongshan laboratory College of Fisheries Huazhong Agricultural University laboratory for marine Biology and Biotechnology Qingdao Marine Science and Technology Center School of marine sciences Ningbo University College of Veterinary Medicine Huazhong Agricultural University

Chemokine CXCL12 plays a crucial role in both direct bactericidal activity and phagocytosis in humans. However, the mechanisms and evolutionary functions of these processes in vertebrates remain largely unknown. In this study, we found that the direct bactericidal activity of CXCL12 is highly conserved across various vertebrate lineages, including Arctic lamprey (Lampetra japonica), Basking shark (Cetorhinus maximus), grass carp (Ctenopharyngodon idella), Western clawed frog (Xenopus tropicalis), Green anole (Anolis carolinensis), chicken(Gallus gallus), and human (Homo sapiens). CXCL12 also has been shown to promote phagocytosis in lower and higher vertebrates. We then employed C. idella CXCL12a (CiCXCL12a) as a model to further investigate its immune functions and underlying mechanisms. CiCXCL12a exerts direct broad-spectrum antibacterial activity by targeting bacterial acidic phospholipids, resulting in bacterial cell membrane perforation, and eventual lysis. Monocytes/macrophages are attracted to the infection sites for phagocytosis through the rapid production of CiCXCL12a during bacterial infection. CiCXCL12a induces CDC42 and CDC42 GTPase activation, which in turn mediates F-actin polymerization and cytoskeletal rearrangement. The interaction between F-actin and Aeromonas hydrophila facilitates bacterial internalization into monocytes/macrophages. Additionally, A. hydrophila is colocalized within early endosomes, late endosomes and lysosomes, ultimately degrading within phagolysosomes. CiCXCL12a also activates PI3K-AKT, JAK-STAT5 and MAPK-ERK signaling pathways. Notably, only the PI3K-AKT signaling pathway inhibits LPS-induced monocyte/macrophage apoptosis. Thus, CiCXCL12a plays key roles in reducing tissue bacterial loads, attenuating organ injury, and decreasing mortality rates. Altogether, our findings elucidate the conserved mechanisms underlying CXCL12-mediated bactericidal activity and phagocytosis, providing novel perspectives into the immune functions

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Catalysis by subsurface metal atoms in Al(001) through electron transfer

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National science Review 2024年第4期11卷 12-13页

作者： Bo Sun Ding Ma Beijing National laboratory for Molecular science New Cornerstone Science Laboratory College of Chemistry and Molecular Engineering Peking University

Heterogeneous catalysis plays a crucial role in the chemical industry, which has evolved from the investigation of chemisorption to an electronic structure[1]. Diverse strategies, such as alloying,doping, and confining, have been applied to enhance the catalytic properties of active sites through electronic modulation. The electron transfer between active sites and substrates profoundly influences catalytic activity [2].

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Effects of inorganic nutrients and environmental factors on the removal of n-propylbenzene and isopropylbenzene in seawater by cryptophytes Rhinomonas reticulata S6A

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Journal of Oceanology and Limnology 2024年第4期42卷 1200-1215页

作者： Jiali CUI Shuhao DU Yumei LI Haiping LI Ping ZHANG Fanping MENG Key laboratory of marine Environment and Ecology Ministry of EducationOcean University of ChinaQingdao 266100China College of Environmental science and Engineering Ocean University of ChinaQingdao 266100China

To effectively remove n-propylbenzene(n-PBZ)and isopropylbenzene(i-PBZ)leaked into seawater using Rhinomonas reticulata S6A(a newly isolated marine microalga),the effects of three inorganic nutrients and four environmental factors on their degradation were determined after 7 d of *** show that NaNO_(3) at 300 mg/L caused a higher removal efficiency of both n-PBZ and i-PBZ(44.79%and 39.26%),while for NaH_(2) PO_(4)·H_(2) O,greater removal rates of two PBZs(47.30%and 42.23%)were achieved at 30 and 20 mg/L,***_(3) supplementation(500-750 mg/L)resulted in a large reduction(43.67%-45.04%)in i-PBZ *** change in seawater pH(from 6 to 9)did not affect the elimination of n-PBZ and *** most suitable salinity and temperature were 30 and 25-30℃,respectively,leading to the PBZs removal of~40%.Light intensity exhibited significant influence on elimination of PBZs,and the maximum removal efficiencies of 56.07%(n-PBZ)and 55.00%(i-PBZ)were recorded under 200 and 600μmol/(m^(2)·s),*** addition,the microalga could still remove PBZs when it failed to grow well due to darkness,strong light,low temperature,or low salinity,which might mean that good growth of alga is not always a necessary condition for PBZs ***,attention should be paid to the suitability of nutrient levels and environmental conditions(excluding pH)in seawater when using microalgae for bioremediating PBZs-contaminated seawater.

关键词： propylbenzene(PBZ) Rhinomonas reticulata seawater inorganic nutrient environmental factor

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