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Enhanced production of thermostable laccases from a native strain of Pycnoporus sanguineus using central composite design

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Journal of Zhejiang University-Science B(Biomedicine & biotechnology) 2014年第4期15卷 343-352页

作者： Leticia I. RAMíREZ-CAVAZOS Charles JUNGHANNS Rakesh NAIR Diana L. CáRDENAS-CHáVEZ Carlos HERNáNDEZ-LUNA Spiros N. AGATHOS Roberto PARRA Centro del Agua para América Latina y el Caribe Tecnológico de MonterreyCampus MonterreyNL 64849Mexico Helmholtz centre for Environmental Research-UFZ Permoserstra?e 1504318 LeipzigGermany Bioengineering Group Earth and Life InstituteUniversité Catholique de LouvainPlace Croix du Sud2Box L7.05.191348 Louvain-la-NeuveBelgium Laboratorio de Enzimología Facultad de Ciencias BiológicasUniversidad Autónoma de Nuevo LeónAv. Universidad s/nCiudad UniversitariaSan Nicolás de los GarzaNL 64450Mexico

The production of thermostable laccases from a native strain of the white-rot fungus Pycnoporus sanguineus isolated in Mexico was enhanced by testing different media and a combination of inducers including copper sulfate（CuSO4）.The best conditions obtained from screening experiments in shaken flasks using tomato juice,CuSO4,and soybean oil were integrated in an experimental *** levels of tomato juice as the medium,CuSO4and soybean oil as inducers（36.8%（v/v）,3 mmol/L,and 1%（v/v）,respectively） were determined for 10 L stirred tank bioreactor *** combination resulted in laccase titer of 143000 IU/L（2,2＇-azino-bis（3-ethylbenzthiazoline-6- sulfonic acid）,pH 3.0）,which represents the highest activity so far reported for *** in a 10-L *** interesting media resulting from the screening included glucose-bactopeptone which increased laccase activity up to 20000 IU/L,whereas the inducers Acid Blue 62 and Reactive Blue 19 enhanced enzyme production in this medium 10 *** on a partial characterization,the laccases of this strain are especially promising in terms of thermostability（half-life of 6.1 h at 60 °C） and activity titers.

关键词： Enhanced laccase production Central composite design Screening media Inducers Tomato juice medium Soybean oil Copper sulfate

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Diterpenoids from Scutellaria barbata induce tumour-selective cytotoxicity by taking the brakes off apoptosis

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Medicinal Plant Biology 2022年第1期1卷 8-23页

作者： Matthew L.Tomlinson Man Zhao Elaine J.Barclay Jie Li Haixiu Li Juri Felix Lionel Hill Gerhard Saalbach Martin Rejzek Dongfeng Yang Qing Zhao Paul Kroon Wei Wang Yongping Bao Melanie-Jayne R.Howes Evangelos C.Tatsis Cathie Martin The John Innes centre NorwichNR47UHUnited Kingdom College of Bioengineering and biotechnology Zhejiang University of TechnologyHangzhou 310058China National Key Laboratory of Plant Molecular Genetics CAS Center for Excellence in Molecular Plant SciencesShanghai Institute of Plant Physiology and EcologyChinese Academy of SciencesShanghai 200032China Royal Botanic Gardens Kew RichmondSurreyLondon TW93ABUnited Kingdom College of Life Sciences Zhejiang Sci-Tech UniversityXiasha Higher Education ZoneHangzhou 310018China Shanghai Key Laboratory of Plant Functional Genomics and Resources Shanghai Chenshan Botanical GardenShanghai Chenshan Plant Science Research CenterChinese Academy of SciencesShanghai 201602China Quadram Institute Bioscience Norwich Research ParkNorwichNR47UAUnited Kingdom Norwich Medical School University of East AngliaNorwichNorfolkNR47TJUnited Kingdom CEPAMS:CAS-JIC centre of Excellence in Plant and Microbial Sciences

Medicinal plants are an excellent source of structurally diverse,bio-active compounds with potential in the fight against *** of the most promising is Scutellaria barbata,prescribed traditionally for the treatment of *** A is the major diterpenoid,produced in specialized large,peltate trichomes on leaves of *** induces dose-dependent apoptosis,specifically in cancer *** major class of proteins down-regulated are pro-survival proteins,the Inhibitors of Apoptosis(IAPs),and IAP regulating *** propose that scutebarbatine A works by releasing the molecular brakes(the IAPs)on apoptosis in cell death-evading cancer *** between the cytotoxicity of methanolic extracts of *** leaves and decoctions(Ban Zhi Lian)prepared traditionally,showed substantially different chemical compositions and differential induction of *** suggest polyvalency between the constituents in both extracts,and ways to produce enhanced chemopreventive preparations for the treatment of cancer.

关键词： prescribed methanol structurally

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王者归来？探索利用基因组编辑技术复活灭绝物种存在的局限性

王者归来？探索利用基因组编辑技术复活灭绝物种存在的局限性

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第十六届全国野生动物生态与资源保护学术研讨会

作者：林剑青 David Duchêne Christian Car?e Oliver Smith Marta Maria Ciucani Jonas Niemann Douglas Richmond Alex D.Greenwood Ross MacPhee 张国捷 Shyam Gopalakrishnan M.Thomas P.Gilbert Guangdong Provincial Key Laboratory of Marine biotechnology Institute of Marine Science Shantou University MOE Key Laboratory of Biosystems Homeostasis & Protection State Conservation Centre for Gene Resources of Endangered Wildlife College of Life Sciences Zhejiang University Center for Evolutionary Hologenomics the GLOBE Institute University of Copenhagen Section for Evolutionary Genomics the GLOBE Institute University of Copenhagen Mammalogy/Vertebrate Zoology & AMNH Gilder Graduate School American Museum of Natural History China National Genebank BGI-Shenzhen Villum Center for Biodiversity Genomics Section for Ecology and Evolution Department of Biology University of Copenhagen State Key Laboratory of Genetic Resources and Evolution Kunming Institute of Zoology Chinese Academy of Sciences Center for Excellence in Animal Evolution and Genetics Chinese Academy of Sciences Bioinformatics Department of Health Technology Technical University of Denmark Norwegian University of Science and Technology (NTNU) University Museum

物种复活(De-extinction,也称"反灭绝")是受到广泛关注和讨论的热门话题。当前,有三种手段可实现灭绝物种"复活":(1)反向繁育;(2)通过跨物种体细胞核移植进行克隆;(3)利用基因编辑技术对近缘物种进行编辑,以获得尽可能接近灭绝物种的基... 详细信息

物种复活(De-extinction,也称"反灭绝")是受到广泛关注和讨论的热门话题。当前,有三种手段可实现灭绝物种"复活":(1)反向繁育;(2)通过跨物种体细胞核移植进行克隆;(3)利用基因编辑技术对近缘物种进行编辑,以获得尽可能接近灭绝物种的基因组。其中,第三种手段可以适用的物种最多,但其最终应用潜力取决于灭绝物种的基因组能在多大程度上被重建。我们提取了由牛津大学自然历史博物馆提供的两个圣诞岛大鼠标本的皮肤DNA,并进行基因组测序,将测序数据比对到挪威褐鼠(Norway brown rat,Rattus norvegicus)参考基因组上,结果发现,虽然测序平均深度高达60.81×,却仅能覆盖到挪威褐鼠基因组95.15%的区域。我们构建了5个大鼠物种的系统进化树并确定物种间分化的时间。虽然这5个物种在230万年前才由共同祖先分化,但这一进化分歧已经足以明显降低其基因组测序数据比对到挪威褐鼠的基因组的覆盖度,其中亚洲家鼠已经低至92.76%。圣诞岛大鼠测序数据无法覆盖的位点有四分之一位于挪威褐鼠的基因区域,其中,有1661个基因的覆盖度低于90%,甚至有26个基因完全无法被测序数据覆盖到。因此,缺失这些序列信息可能会产生功能性的影响。挪威褐鼠基因上不被完全覆盖的基因并不是在基因组上随机分布的。对覆盖度低于90%的基因进行功能分析发现,他们在免疫应答和嗅觉功能有关的类别中显著富集。当前的物种复活工作聚焦在猛犸象和旅鸽等物种,不太可能会有人想尝试复活一只大鼠。尽管如此,我们基于对这一对亲缘关系很近的大鼠物种的分析说明,当灭绝和现存物种的进化分歧增大的时候,所带来的挑战会更大。在这样的背景下,我们注意到,猛犸象和亚洲象的基因组分化程度与圣诞岛大鼠和挪威褐鼠基因组分化程度是相近的,而旅鸽和斑尾鸽之间的距离更大(2.24倍)。由于分化距离不仅跟物种分化的绝对时间有关,也跟世代时间有关,每个物种复活项目启动之前,最好能逐个进行分析论证。该论文展示的方法,可以为未来"物种复活"项目提供一个可行性论证框架。

关键词：物种复活进化分歧古DNA 圣诞岛大鼠分子定年

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The contribution of fungi to the global economy

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Fungal Diversity 2023年第4期121卷 95-137页

作者： Allen Grace T.Niego Christopher Lambert Peter Mortimer Naritsada Thongklang Sylvie Rapior Miriam Grosse Hedda Schrey Esteban Charria‑Girón Arttapon Walker Kevin D.Hyde Marc Stadler School of Science Mae Fah Luang UniversityChiang RaiThailand Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang RaiThailand Iloilo Science and Technology University La Paz5000 IloiloPhilippines Department Microbial Drugs Helmholtz Centre for Infection ResearchInhoffenstrasse 738124 BrunswickGermany Institute of Microbiology Technische Universitat BraunschweigSpielmannstrase 738106 BrunswickGermany Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanPeople’s Republic of China Laboratory of Botany Phytochemistry and MycologyFaculty of PharmacyCS 1449115 Avenue Charles Flahault34093 Montpellier Cedex 5France CEFE CNRSUniv MontpellierEPHEIRDCS 1449115 Avenue Charles Flahault34093 Montpellier Cedex 5France Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Institute for Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225People’s Republic of China

Fungi provide ecological and environmental services to humans, as well as health and nutritional benefits, and are vital to numerousindustries. Fermented food and beverage products from fungi are circulating in the market, generating billions of ***, the highest potential monetary value of fungi is their role in blue carbon trading because of their ability to sequesterlarge amounts of carbon in the soil. There are no conclusive estimates available on the global monetary value of fungi, primarilybecause there are limited data for extrapolation. This study outlines the contribution of fungi to the global economy and providesa first attempt at quantifying the global monetary value of fungi. Our estimate of USD 54.57 trillion provides a starting point thatcan be analysed and improved, highlighting the significance of fungi and providing an appreciation of their value. This paperidentifies the different economically valuable products and services provided by fungi. By giving a monetary value to all importantfungal products, services, and industrial applications underscores their significance in biodiversity and conservation. Furthermore,if the value of fungi is well established, they will be considered in future policies for effective ecosystem management.

关键词： Fungi-based food Medicinal mushrooms Market value Environmental biotechnology

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Fungal diversity notes 1–110:taxonomic and phylogenetic contributions to fungal species

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Fungal Diversity 2015年第3期72卷 1-197页

作者： Jian Kui Liu Kevin D.Hyde E.B.Gareth Jones Hiran A.Ariyawansa Darbhe J.Bhat Saranyaphat Boonmee Sajeewa S.N.Maharachchikumbura Eric H.C.McKenzie Rungtiwa Phookamsak Chayanard Phukhamsakda Belle Damodara Shenoy Mohamed A,Abdel-Wahab Bart Buyck Jie Chen K.W.Thilini Chethana Chonticha Singtripop Dong Qin Dai Yu Cheng Dai Dinushani ADaranagama Asha J.Dissanayake Mingkwan Doilom Melvina J.D’souza Xin Lei Fan Ishani DGoonasekara Kazuyuki Hirayama Sinang Hongsanan Subashini C.Jayasiri Ruvishika S.Jayawardena Samantha C.Karunarathna Wen Jing Li Ausana Mapook Chada Norphanphoun Ka Lai Pang Rekhani H.Perera Derek Peršoh Umpava Pinruan Indunil CSenanayake Sayanh Somrithipol Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Qing Tian Saowaluck Tibpromma Danushka Udayanga Nalin N.Wijayawardene Dhanuska Wanasinghe Komsit Wisitrassameewong Xiang Yu Zeng Faten AAbdel-Aziz Slavomir Adamčík Ali H.Bahkali Nattawut Boonyuen Timur Bulgakov Philippe Callac Putarak Chomnunti Katrin Greiner Akira Hashimoto Valerie Hofstetter Ji Chuan Kang David Lewis Xing Hong Li Xing Zhong Liu Zuo Yi Liu Misato Matsumura Peter E.Mortimer Gerhard Rambold Emile Randrianjohany Genki Sato Veera Sri-Indrasutdhi Cheng Ming Tian Annemieke Verbeken Wolfgang von Brackel Yong Wang Ting Chi Wen Jian Chu Xu Ji Ye Yan Rui Lin Zhao Erio Camporesi Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina Institute of Excellence in Fungal Research and School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Formerly Department of Botany Goa UniversityGoaIndia No.128/1–J Azad Housing SocietyCurcaGoa VelhaIndia Muséum national d’histoire naturelle Dépt.Systématique etévolutionUMR 720575005 ParisFrance Institute of Microbiology&Beijing Key Laboratory for Forest Pest Control Beijing Forestry UniversityPO Box 61Beijing 100083China Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo.9 of Shu Guang Hua Yuan Zhong LuHaidian DistrictBeijing 10097China The Key Laboratory for Silviculture and Conservation of Ministry of Education Beijing Forestry UniversityBeijing 100083China Mycology University of BayreuthUniversitätsstraße 3095440 BayreuthGermany The United Graduate School of Agricultural Sciences Iwate University18-8 Ueda 3 chomeMorioka 020-8550Japan Apple Experiment Station Aomori Prefectural Agriculture and Forestry Research Center24 FukutamiBotandairaKuroishiAomori 036-0332Japan Department of Plant Protection Agroscope Changins-Wadenswil Research Station ACWRte de Duiller1260 NyonSwitzerland Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Department of Botany Faculty of ScienceSohag UniversitySohagEgypt Institute of Botany Slovak Academy of SciencesDúbravskácesta 984523 BratislavaSlovakia Hirosaki University Bleakwood262 CR 3062NewtonTexas 75966USA Faculty of Agriculture and Life Sciences Hirosaki University3 Bunkyo-choHirosakiAomori

This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic *** new family,Paradictyoarthriniaceae is introduced based on its distinct lineage in Dothideomycetes and its unique *** family is sister to Biatriosporaceae and *** new genera are Allophaeosphaeria(Phaeosphaeriaceae),Amphibambusa(Amphisphaeriaceae),Brunneomycosphaerella(Capnodiales genera incertae cedis),Chaetocapnodium(Capnodiaceae),Flammeascoma(Anteagloniaceae),Multiseptospora(Pleosporales genera incertae cedis),Neogaeumannomyces(Magnaporthaceae),Palmiascoma(Bambusicolaceae),Paralecia(Squamarinaceae)and Sarimanas(Melanommataceae).The newly described species are the Ascomycota Aliquandostipite manochii,Allophaeosphaeria dactylidis,***,Alternaria cesenica,Amphibambusa bambusicola,Amphisphaeria sorbi,Annulohypoxylon thailandicum,Atrotorquata spartii,Brunneomycosphaerella laburni,Byssosphaeria musae,Camarosporium aborescentis,***,***,Chaetocapnodium siamensis,Chaetothyrium agathis,Colletotrichum sedi,Conicomyces pseudotransvaalensis,Cytospora berberidis,***,Diaporthe thunbergiicola,Diatrype palmicola,Dictyosporium aquaticum,***,***,Didymella cirsii,Dinemasporium nelloi,Flammeascoma bambusae,Kalmusia italica,***,Keissleriella sparticola,Lauriomyces synnematicus,Leptosphaeria ebuli,Lophiostoma pseudodictyosporium,***,Lophiotrema eburnoides,Montagnula graminicola,Multiseptospora thailandica,Myrothecium macrosporum,Natantispora unipolaris,Neogaeumannomyces bambusicola,Neosetophoma clematidis,***,Oxydothis atypica,Palmiascoma gregariascomum,Paraconiothyrium nelloi,***,Paradictyoarthrinium tectonicola,Paralecia pratorum,Paraphaeosphaeria spartii,Pestalotiopsis digitalis,***,***,Phaeoisaria pseudoclematidis,Phragmocapnias philippinensis,Pseudocamarosporium cotinae,Pseudocercospora tam

关键词： Ascomycota Basidiomycota Global Taxonomy Initiative Phylogeny Taxonomy

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Effects of Long-term Located Fertilization on Evolution of Available Phosphorus and Phosphorus Pool in Shandong Fluvo-aquic Soil

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Agricultural biotechnology 2018年第2期7卷 74-80页

作者： Yingpeng ZHANG Gang DUAN Cuiping SUN Ziwen ZHONG Ming SUN Yongping JING Jiafa LUO Luji BO Yan LI Institute of Agricultural Resources and Environment Shandong Academy of Agricultural SciencesJinan 250100China Agricultural Bureau of Changqing District Jinan 250300China Key Laboratory of Agro-environment of Huang-Huai-Hai Plain Ministry of AgricultureJinan 250100China Key Laboratory of Wastes Matrix Utilization Ministry of AgricultureJinan 250100China Shandong Provincial Key Laboratory of Agricultural Non-Point Source Pollution Control Jinan 250100China Shandong Provincial Engineering Research Center of Environmental Protection Fertilizers Jinan 250100China Ruakura Research centre AgResearch LimitedHamilton 3240NewZealan

This study was conducted to investigate the effects of long-term located fertilization on soil phosphorus,the changes of soil available phosphorus(OlsenP),the evolution of soil total phosphorus(TP)and the ratio change of Olsen-P to TP(PAC)by 33-year fertilization experiments in winter wheat-summer maize rotation system in Shandong fluvo-aquic *** treatments were designed as no fertilization(CK),nitrogen fertilizer(N),nitrogen and phosphate fertilizer(NP),nitrogen and potassium fertilizer(NK),phosphate and potassium fertilizer(PK),nitrogen-phosphate-potassium fertilizer(NPK),reduced NPK fertilizer(N(15)PK),and increased NPK fertilizer(N_(25)PK).Meanwhile,eight organic fertilizer-added treatments were designed based on the application of inorganic fertilizer the same as the above *** results showed that TP,Olsen-P and PAC of treatments added with organic fertilizer were higher than those without organic fertilizer,and those of the treatments applied with phosphate fertilizer were higher than those of no phosphate *** the increase of years,soil P pool decreased due to crop absorption,nutrient loss and morphological transformation and other causes under the treatments of without and only phosphate fertilizer,while remained stable under the treatments added with organic *** PAC values were generally lower in fluvo-aquic soil,and it could be improved by the application of organic *** the whole,the application of chemical phosphate fertilizer combined with organic fertilizer could improve the phosphorus content in soil and ensure the supply of phosphorus *** study would provide scientific basis for fertilization management and soil fertility in fluvo-aquic soil.

关键词： Long-term located fertilization Fluvo-aquic soil Total phosphorus Available phosphorus Phosphorus pool Activity coefficient

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Fungal diversity notes 1036-1150:taxonomic and phylogenetic contributions on genera and species of fungal taxa

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Fungal Diversity 2019年第3期96卷 1-242页

作者： Kevin D.Hyde Danushka S.Tennakoon Rajesh Jeewon DJayarama Bhat Sajeewa S.N.Maharachchikumbura Walter Rossi Marco Leonardi Hyang Burm Lee Hye Yeon Mun Jos Houbraken Thuong T.T.Nguyen Sun Jeong Jeon Jens Christian Frisvad Dhanushka N.Wanasinghe Robert Lucking Andre Aptroot Marcela E.S.Caceres Samantha C.Karunarathna Sinang Hongsanan Rungtiwa Phookamsak Nimali Ide Silva Kasun M.Thambugala Ruvishika S.Jayawardena Indunil C.Senanayake Saranyaphat Boonmee Jie Chen Zong-Long Luo Chayanard Phukhamsakda Olinto L.Pereira Vanessa P.Abreu Andre Wilson Campos Rosado Buyck Bart Emile Randrianjohany Vale rie Hofstetter Tatiana B.Gibertoni Adriene Mayrada Silva Soares Helio Longoni Plautz Jr Helen Maria Pontes Sotao William Kalhy Silva Xavier Jadson Diogo Pereira Bezerra Thays Gabrielle Linsde Oliveira Cristina Mariade Souza-Motta Oliane Maria Correia Magalhaes Digvijayini Bundhun Dulanjalee Harishchandra Ishara S.Manawasinghe Wei Dong Sheng-Nan Zhang Dan-Feng Bao Milan C.Samarakoon Dhandevi Pem Anuruddha Karunarathna Chuan-Gen Lin Jing Yang Rekhani H.Perera Vinit Kumar Shi-Ke Huang Monika C.Dayarathne Anusha H.Ekanayaka Subashini C.Jayasiri Yuanpin Xiao Sirinapa Konta Tuula Niskanen Kare Liimatainen Yu-Cheng Dai Xiao-Hong Ji Xue-Mei Tian Armin Mesic Sanjay K.Singh Kunthida Phutthacharoen Lei Cai Touny Sorvongxay Vinodhini Thiyagaraja Chada Norphanphoun Napalai Chaiwan Yong-Zhong Lu Hong-Bo Jiang Jin-Feng Zhang Pranami D.Abeywickrama Janith V.S.Aluthmuhandiram Rashika S.Brahmanage Ming Zeng Thilini Chethana Deping Wei Martina Reblova Jacques Fournier Jana Nekvindova Renan do Nascimento Barbosa Jose Ewerton Felintodos Santos Neiva Tintide Oliveira Guo-Jie Li Damien Ertz Qiu-Ju Shang Alan J.L.Phillips Chang-Hsin Kuo Erio Camporesi Timur S.Bulgakov Saisamorn Lumyong E.B.Gareth Jones Putarak Chomnunti Eleni Gentekaki Frank Bungartz Xiang-Yu Zeng Sally Fryar Zdenko Tkalcec Junmin Liang Guangshuo Li Ting-Chi Wen Paras Nath Singh Yusufjon Gafforov Itthayakorn Promputtha Erandi Yasanthika Ishani D.Goonasekara Rui-Lin Zhao Qi Zhao Paul M Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand East and Central Asia Regional Office World Agroforestry Centre(ICRAF)Kunming 650201YunnanPeople’s Republic of China Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Department of Plant Medicine National Chiayi University300 Syuefu RoadChiayi City 60004TaiwanPeople’s Republic of China Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Formerly Department of Botany Goa UniversityGoaIndia No.128/1-J Azad Housing SocietyCurcaGoa Velha 403108India Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniversityPO Box 8123 Al KhoudOman Sect.Environmental Sciences Dept.MeSVAUniversity of L’Aquila67100 CoppitoAQItaly Division of Food Technology Biotechnology&AgrochemistryCollege of Agriculture&Life SciencesChonnam National UniversityGwangju 61186Korea Fungal Resources Research Division NNIBRSangju-si 37242Korea Westerdijk Fungal Biodiversity Institute Uppsalalaan 83584 CT UtrechtThe Netherlands Department of biotechnology and Biomedicine DTUBioengineeringTechnical University of Denmark2800 Kongens LyngbyDenmark Botanischer Garten und Botanisches Museum Berlin Freie Universitat BerlinKonigin-Luise-StraßBe 6-814195 BerlinGermany Laboratorio de Botanica/Liquenologia Instituto de BiocienciasUniversidade Federal de Mato Grosso do SulAvenida Costa e Silva s/nBairro UniversitarioCampo GrandeMatto Grosso do Sul CEP 79070-900Brazil Departamento de Biociencias Universidade Federal de SergipeItabaianaSergipe CEP:49500-000Brazil Shenzhen Key Laboratory of Microbial

This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and *** described in the present study include one new family(*** in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(*** thailandica,Amniculicola aquatica,***,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,***,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,***,Diaporthe italiana,***,Diatrypella delonicis,Dictyocheirospora aquadulcis,***,Digitodesmium chiangmaiense,Distoseptispora dehongensis,***,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,***,Grammothele aurantiaca,***,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,***,Nodulosphaeria aquilegiae,***,Paramassaria samaneae,Penicillium circulare,***,***-pumilae,***,***,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,***,***,***,***,Thysanorea uniseptata,Torula breviconidiophora,***,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(*** cryptotrema,Prolixandromyces australi,***,***,***,P.

关键词： 71 new taxa Ascomycota Basidiomycota Dothideomycetes Eurotiomycetes Lecanoromycetes Leotiomycetes Pezizomycetes Phylogeny Taxonomy

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Adaptive evolution to the natural and anthropogenic environment in a global invasive crop pest,the cotton bollworm

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The Innovation 2023年第4期4卷 91-101页

作者： Minghui Jin Henry L.North Yan Peng Hangwei Liu Bo Liu Ruiqing Pan Yan Zhou Weigang Zheng Kaiyu Liu Bo Yang Lei Zhang Qi Xu Samia Elfekih Wendy A.Valencia-Montoya Tom Walsh Peng Cui Yongfeng Zhou Kenneth Wilson Chris Jiggins Kongming Wu Yutao Xiao Shenzhen Branch Guangdong Laboratory of Lingnan Modern AgricultureKey Laboratory of Gene Editing Technologies(Hainan)Ministry of Agriculture and Rural AffairsAgricultural Genomics Institute at ShenzhenChinese Academy of Agricultural SciencesShenzhen 518116China The State Key Laboratory for Biology of Plant Disease and Insect Pests Institute of Plant ProtectionChinese Academy of Agricultural SciencesWest Yuanmingyuan RoadBeijing 100193China Department of Zoology University of CambridgeCambridge CB21SZUK College of Plant Science and Technology Huazhong Agricultural UniversityWuhan 430070China Lancaster Environment centre Lancaster UniversityLancaster LA14YWUK Berry Genomics Corporation Beijing 102200China Institute of Entomology School of Life SciencesCentral China Normal UniversityWuhan 430079China Australian centre for Disease Preparedness(ACDP) CSIRO Health&BiosecurityEast GeelongVIC 3169Australia Bio21 Institute and the School of Biosciences The University of MelbourneMelbourneVIC 3010Australia Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology Harvard UniversityCambridgeMA 02138USA CSIRO Land and Water Black Mountain LaboratoriesCanberraACT 2601Australia

The cotton bollworm,Helicoverpa armigera,is set to become the most economically devastating crop pest in the world,threatening food security and biosafety as its range expands across the *** to understanding the eco-evolutionary dynamics of ***,and thus its management,is an understanding of population connectivity and the adaptations that allow the pest to establish in unique *** assembled a chromosome-scale reference genome and re-sequenced 503 individuals spanning the species range to delineate global patterns of connectivity,uncovering a previously cryptic population structure.

关键词： connectivity cotton evolution

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Mapping tree species distribution in support of China's integrated tree-livestock-crop system

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Circular Agricultural Systems 2021年第1期1卷 9-19页

作者： Sailesh Ranjitkar Dengpan Bu Nani Maiya Sujakhu Marius Gilbert Timothy PRobinson Roeland Kindt Jianchu Xu Honghe Center for Mountain Futures Kunming Institute of BotanyHonghe County 654400YunnanChina N.Gene Solution of Natural Innovation Pvt.Ltd. Kathmandu 44614Nepal Mid-Western University Faculty of Humanities and Social ScienceNaya BatoLalitpur 44600Nepal State Key Laboratory of Animal Nutrition Institute of Animal ScienceChinese Academy of Agricultural SciencesBeijing 100193China Hunan Co-Innovation Center of Animal Production Safety ChangshaHunanChina National centre for Borderland Ethnic Studies in Southwest China Yunnan UniversityKunming 650091China UniversitéLibre de Bruxelles(ULB) Brussels 1050Belgium Animal Production and Health Division(AGA) Food and Agriculture Organization of the United NationsRome 00153Italy World Agroforestry(ICRAF) United Nations AvenueGigiriNairobi 00100Kenya Key Laboratory of Economic Plants and biotechnology Kunming Institute of BotanyChinese Academy of SciencesKunming 650201China East and Central Asia Regional World Agroforestry Centre(ICRAF)Kunming 650201China

The primary challenge of the contemporary world is to meet accelerating requirements for *** land,competition between crop and livestock farming and climate change are major *** offer a form of sustainable agriculture through the direct provision of food by raising farmers’incomes and through various ecosystem *** first essential step in adopting agroforestry is the selection of appropriate tree species that fit local *** this paper,we mapped 20 fodder trees and important crops in China using the multi-model ensemble and Ecocrop modelling *** on the intersectional concept of set theory,the fuzzy logic technique was applied to identify regions where candidate trees could be grown with appropriate crops and *** resulting models provide important insights into the climatic suitability of trees and crops and offer knowledge critical to the proper integration of trees with crops and livestock at specific *** results offer support for developing appropriate strategies regarding potential land-use within agroforestry systems in order to maximize ecosystem services and the benefits of sustainable *** outputs could easily convert into conventional maps with clearly defined boundaries for site-specific planning for tree-crop-livestock *** next step for actualizing an integrated system is to investigate specifically what these different species may contribute to the existing farming systems,quantify the benefits and estimate any possible tradeoffs.

关键词： system intersection crops

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Improving ITS sequence data for identification of plant pathogenic fungi

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Fungal Diversity 2014年第4期67卷 11-19页

作者： R.Henrik Nilsson Kevin D.Hyde Julia Pawlowska Martin Ryberg Leho Tedersoo Anders Bjornsgard Aas Siti A.Alias Artur Alves Cajsa Lisa Anderson Alexandre Antonelli A.Elizabeth Arnold Barbara Bahnmann Mohammad Bahram Johan Bengtsson-Palme Anna Berlin Sara Branco Putarak Chomnunti Asha Dissanayake Rein Drenkhan Hanna Friberg Tobias Guldberg Froslev Bettina Halwachs Martin Hartmann Beatrice Henricot Ruvishika Jayawardena Ari Jumpponen Havard Kauserud Sonja Koskela Tomasz Kulik Kare Liimatainen Bjorn D.Lindahl Daniel Lindner Jian-Kui Liu Sajeewa Maharachchikumbura Dimuthu Manamgoda Svante Martinsson Maria Alice Neves Tuula Niskanen Stephan Nylinder Olinto Liparini Pereira Danilo Batista Pinho Teresita M.Porter Valentin Queloz Taavi Riit Marisol Sánchez-García Filipe de Sousa Emil Stefańczyk Mariusz Tadych Susumu Takamatsu Qing Tian Dhanushka Udayanga Martin Unterseher Zheng Wang Saowanee Wikee Jiye Yan Ellen Larsson Karl-Henrik Larsson Urmas Koljalg Kessy Abarenkov Department of Biological and Environmental Sciences University of GothenburgBox 46140530 GothenburgSweden Institute of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Plant Systematics and Geography Faculty of BiologyUniversity of WarsawAl.Ujazdowskie 400-478 WarsawPoland Department of Organismal Biology Uppsala UniversityNorbyvagen 18D75236 UppsalaSweden Institute of Ecology and Earth Sciences University of TartuLai 40Tartu 51005Estonia Microbial Evolution Research Group University of OsloBlindernveien 310371 OsloNorway Institute of Biological Sciences University of Malaya50603 Kuala LumpurMalaysia Department of Biology CESAMUniversity of Aveiro3810-193 AveiroPortugal School of Plant Sciences The University of Arizona1140 E South Campus DriveForbes 303TucsonAZ 85721USA Laboratory of Environmental Microbiology Institute of Microbiology ASCRVídeňská108314220 Prague 4Czech Republic Department of Infectious Diseases Institute of BiomedicineSahlgrenska AcademyUniversity of GothenburgGuldhedsgatan 1041346 GoteborgSweden Department of Forest Mycology and Plant Pathology Swedish University of Agricultural SciencesBox 702675007 UppsalaSweden University of California at Berkeley 321 Koshland Hall University of CaliforniaBerkeleyCA 94720-3102USA Agriculture and Forestry Sciences Beijing 100097China Institute of Forestry and Rural Engineering Estonian University of Life SciencesKreutzwaldi551014 TartuEstonia Natural History Museum of Denmark Øster Voldgade 5-71350 København KDenmark Institute for Genomics and Bioinformatics Graz University of Technology8010 GrazAustria Core Facility Bioinformatics Austrian Centre of Industrial Biotechnology8010 GrazAustria Forest Soils and Biogeochemistry Swiss Federal Research Institute WSLZuercherstrasse 1118903 BirmensdorfSwitzerland Molecular Ecology Institute for Sustainability SciencesAgroscopeReckenholzstrasse 191

Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human *** taxa often have complex and poorly understood life cycles,lack observable,discriminatory morphological characters,and may not be amenable to in vitro *** a result,species identification is frequently ***(DNA sequence)data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi,with the nuclear ribosomal internal transcribed spacer(ITS)region being the most popular ***,international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality,making their use in the molecular identification of plant pathogenic fungi *** we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages.A third objective was to enrich the sequences with geographical and ecological *** results-a total of 31,954 changes-are incorporated in and made available through the UNITE database for molecular identification of fungi(http://***),including standalone FASTA files of sequence data for local BLAST searches,use in the next-generation sequencing analysis platforms QIIME and mothur,and related *** present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi,and we invite all researchers with pertinent expertise to join the annotation effort.

关键词： Phytopathogenic fungi Molecular identification ITS Taxonomy Annotation

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