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Phylogenetic analysis of Toxicodendron(Anacardiaceae) and its biogeographic implications on the evolution of north temperate and tropical intercontinental disjunctions

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Journal of Systematics and Evolution 2009年第5期47卷 416-430页

作者： 1,2Ze-Long NIE 1Hang SUN 1Ying MENG 1,3,4Jun WEN 1(Key Laboratory of Biodiversity and Biogeography,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650204,China) 2(Graduate School of Chinese Academy of Sciences,Beijing 100049,China) 3(Department of Botany,National Museum of Natural History,Smithsonian Institution,Washington,DC 20013-7012,USA) 4(Key Laboratory of Systematic and Evolutionary Botany,Institute of Botany,Chinese Academy of Sciences,Beijing 100093,China) (Key Laboratory of Biodiversity and Biogeography Kunming Institute of Botany Chinese Academy of Sciences Kunming 650204 China) (Graduate School of Chinese Academy of Sciences Beijing 100049 China) (Department of Botany National Museum of Natural History Smithsonian Institution Washington DC 20013-7012 USA) (Key Laboratory of Systematic and Evolutionary Botany Institute of Botany Chinese Academy of Sciences Beijing 100093 China)

Toxicodendron is a genus in the Rhus complex of Anacardiaceae with a disjunct distribution between eastern Asia and North America,extending to southeastern Asia and the ***(internal transcribed spacer,external transcribed spacer,and NIA-i3) and chloroplast(ndhF and trnL-F) sequences were used to construct phylogenetic relationships of *** analysis of these data strongly support Toxicodendron as a monophyletic group distinct from other genera of the Rhus complex,and the phylogeny does not fully corroborate classification at the sectional *** temperate disjunct lineages were detected,one from section Toxicodendron and the other between the eastern North American Toxicodendron vernix and the eastern Asian Toxicodendron *** divergence times were estimated to be 13.46(7.95-19.42) and 7.53(2.76-12.86) mya,*** disjunction between section Griffithii(taxa from warm temperate to tropical Asia) and Toxicodendron striatum(from the neotropics) was supported and their divergence time was estimated to be 20.84(11.16-30.52) mya in the early *** biogeographic results and the paleontological data support the Bering land bridge as the most likely route to explain the temperate disjunctions,yet the tropical disjunction in Toxicodendron seems to be best explained by the North Atlantic land bridge hypothesis.

关键词： Anacardiaceae biogeography disjunction eastern Asia neotropics North America phylogenetics Toxicodendron.

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Comparative mitogenome phylogeography of two anteater genera (Tamandua and Myrmecophaga;Myrmecophagidae, Xenarthra): Evidence of discrepant evolutionary traits

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Zoological Research 2021年第5期42卷 525-547页

作者： Manuel Ruiz-García Daniel Pinilla-Beltrán Oscar E.Murillo-García Christian Miguel Pinto Jorge Brito Joseph Mark Shostell Laboratorio de Genética de Poblaciones Molecular-Biología Evolutiva Departamento de BiologíaFacultad de CienciasPontificia Universidad JaverianaBogotáDC 110231Colombia Grupo de Investigación en Ecología Animal Departamento de BiologíaFacultad de Ciencias Naturales y ExactasUniversidad del ValleApartado AéreoCali 25360Colombia Instituto de Ciencias Biológicas Escuela Politécnica NacionalQuito 17012759Ecuador Instituto Nacional de Biodiversidad(INABIO) Quito 170135Ecuador Math Science and Technology DepartmentUniversity of Minnesota CrookstonCrookstonMN 56716USA

The species within Xenarthra(sloths,anteaters,and armadillos)are quintessential South American *** the three groups,Vermilingua(anteaters)contains the fewest extant and paleontological ***,we sampled and sequenced the entire mitochondrial genomes(mitogenomes)of two Tamandua species(Tamandua tetradactyla and ***)(n=74)from Central and South America,as well as Myrmecophaga tridactyla(n=41)from South *** Tamandua,we detected three different *** oldest(THI)contained many specimens with the *** morphotype(but also several with the *** morphotype)and originated in southeastern South America(currently Uruguay)before moving towards northern South America,where the THII haplogroup *** primarily contained specimens with the *** morphotype(but also several with the *** morphotype)and was distributed in Central America,Colombia,and *** and THII yielded a genetic distance of 4%.THII originated in either northern South America or“in situ”in Central America with haplogroup THIII,which consisted of~50%*** and 50%*** *** was mostly located in the same areas as THII,i.e.,Central America,Ecuador,and Colombia,though mainly in the *** three haplogroups overlapped in Colombia and ***,*** and *** were not reciprocally *** this reason,we considered that a unique species of Tamandua likely exists,i.e.,*** contrast to Tamandua,*** did not show different morphotypes throughout its geographical range in the ***,two very divergent genetic haplogroups(MHI and MHII),with a genetic distance of~10%,were *** basal haplogroup,MHI,originated in northwestern South America,whereas the more geographically derived haplogroup,MHII,overlapped with MHI,but also expanded into central and southern South ***,Tamandua migrated from south to north whereas Myrmecophaga migrated from

关键词： Anteaters Genetic diversity Mitogenomes Myrmecophaga neotropics Phylogeography Spatial structure Tamandua

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Consistency in bird community assembly over medium-term along rural-urban gradients in Argentina

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Ecological Processes 2021年第1期10卷 449-458页

作者： Lucas M.Leveau Departamento de Ecología Genética y EvoluciónFacultad de Ciencias Exactas y NaturalesUniversidad de Buenos Aires–IEGEBA(CONICET–UBA)Ciudad UniversitariaPab 2Piso 41426 Buenos AiresArgentina

Background:The analysis of bird community assembly rules is fundamental to understand which mechanisms determine the composition of bird species in urban ***,the long-term variation of community assembly rules has not been analyzed *** objectives of this study are(1)to analyze the variation of community assembly rules along rural-urban gradients of three cities in central Argentina and(2)to compare the patterns of community assembly between two periods separated by 6 *** surveys were performed along transects in urban,suburban,and rural habitats during 2011 and *** from null models that took into account differences in species richness(standardized effect size,SES)were calculated for functional and phylogenetic ***:A total of 57 species were *** species richness was higher in suburban than in urban and rural *** of functional diversity increased over the years and was significantly lower in urban habitats than in rural habitats,showing a pattern of functional clustering in the most urbanized areas and functional randomness in rural *** diversity was higher in both suburban and urban habitats than rural ones,and the phylogenetic clustering in rural bird assemblages changed to randomness in suburban and urban ***:Bird communities in urban habitats were phylogenetically random and functionally clustered,evidencing environmental filtering by *** contrast,bird communities in rural areas tended to be phylogenetically clustered,evidencing that certain clades are adapted to rural *** processes structuring bird communities along rural-urban gradients were consistent between the 2 years compared.

关键词： Birds Interannual Latin America neotropics Urbanization

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Selectivity in feeding preferences and ranging patterns in spider monkeys Ateles geoffroyi yucatanensis of northeastern Yucatan peninsula, Mexico

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Current Zoology 2013年第1期59卷 125-134页

作者： Carmen SCHERBAUM Alejandro ESTRADA Department of Animal Ecology and Tropical Biology Biozentrum University of Wiirzburg Germany Estacion de Biologia Tropical Los Tuxtlas Instituto de Biologfa Universidad Nacional Aut6noma de M6xico Apartado Postal94 San Andres Tuxtla Veracruz M6xico C. P. 95700

The spider monkey, a fruit specialist and important seed dispersal agent in the neotropics, is an endangered primate due to habitat loss, hunting and the pet trade. Spider monkeys have been the subject of a few studies in Central and South Ame- rica, but little is known about the diet and ranging for this primate in southern Mexico. Here we report the results of a six-month long study （October 2010 to March 2011） of the feeding preferences and ranging patterns of the Yucatan spider monkey Ateles geoffroyi yucatanensis living in the ＂Ya＇ax＇che＂ reserve by the Caribbean coast in northeast Yucatan peninsula. Focal animal and scan sampling as well as GPS tracking were used to document spider monkey feeding behavior, location of food trees and ranging in the reserve. The spider monkeys used 36 species of plants （94% trees; n = 432） and six non tree morphospecies as a source of food. Six tree species accounted for 〉~80% of total feeding time and for 74% of all trees used. Fruits accounted for 59% of total feeding time, followed by leaves （35%）, palm piths （5%） and other plant parts （1%）. Total range used by the monkeys was esti- mated at 43% of semievergreen rainforest habitat available （ca 40ha）. Range use was not random with segments showing light, moderate and heavy use; the use of different areas of their range varied monthly and was closely linked to the spatial dispersion of the trees used for food [Current Zoology 59 （1）： 125-134, 2013].

关键词： Primates Frugivory neotropics Conservation Seed dispersal

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Modularity and specialization in bat-fly interaction networks are remarkably consistent across patches within urbanized landscapes and spatial scales

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Current Zoology 2021年第4期67卷 403-410页

作者： Gustavo Lima Urbieta Gustavo Graciolli Jeferson Vizentin-Bugoimi Programa de Pós-Graduação em Ciencias Biológicas Departamento de Sistematica e EcologiaUniversidade Federal da ParaibaCidade Jardim Universitários/nCastelo BrancoJoão Pessoa 58051-900Brazil Programa de Pós-Graduação em Biologia Animal Laboratorio de SistematicaEcologia e Evoluqao(LSEE)Instituto de BiocienciasUniversidade Federal de Mato Grosso do Sul(UFMS)Campo Grande 79090-900Brazil Department of Natural Resources and Environmental Sciences University of Illinois at Urbana-ChampaignUrbanaIL 61801USA

Patterns of specialization and the structure of interactions between bats and ectoparasitic flies have been studied mostly on non-urban environments and at local ***,how anthropogenic disturbances influence species interactions and network structure in this system remain poorly ***,we investigated patterns of interaction between Phyllostomidae bats and ectoparasitic Streblidae flies,and variations in network specialization and structure across Cerrado patches within urbanized landscapes in Brazil and between local and regional *** found high similarity in the richness and composition of bat and fly species across communities,associated with low turnover of interactions between *** high specialization of bat-streblid interactions resulted in little connected and modular networks,with the emergence of modules containing subsets of species that interact exclusively or primarily with each *** similarities in species and interaction composition and network structure across communities and scales suggest that bat-fly interactions within Cerrado patches are little affected by the degree of human modification in the surrounding *** remarkable consistency is likely promoted by specific behaviors,the tolerance of Phyllostomidae bats to surrounding urbanized landscapes as well as by the specificity of the streblid-bat interactions shaped over evolutionary time.

关键词： Chiroptera ectoparasites host-parasite network neotropics Streblidae urbanization

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Biogeographic patterns of the myxomycete biota of the Americas using a parsimony analysis of endemicity

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Fungal Diversity 2013年第2期59卷 159-177页

作者： Arturo Estrada-Torres Diana Wrigley de Basanta Carlos Lado Centro de Investigación en Ciencias Biológicas Universidad Autónoma de TlaxcalaApartado Postal 183Tlaxcala 90000 TlaxcalaMexico Real Jardín Botánico de Madrid CSIC Plaza de Murillo 228014MadridSpain

Myxomycetes are microorganisms frequently considered to be of cosmopolitan distribution,however as studies in unexplored areas have intensified,more information has become available on the patterns of distribution of these organisms,but no historical or cladistic biogeographic approaches have been applied to understand such *** this study a parsimony analysis of endemicity(PAE)was used in order to generate a preliminary hypothesis on the biogeographic relationships of 13 American areas in which a well-known myxomycete biota *** general terms the hypotheses of the relationship between the myxomycete assemblages of areas used in this study agree with those reported for other groups of *** appear to show that a historical-geographic pattern influences the distribution of myxomycetes as much as environmental *** main clades were found in the analysis,with the first one including the two subantarctic localities,the second one representing the South American transition zone and the last one including all the Neotropical and Nearctic areas,but arranged into two subclades,one with the arid areas and the other with the tropical and temperate humid *** clade or subclade in the cladogram is supported by the presence of several morphospecies,some of which appear to represent endemic species restricted to specific geographic *** results of this analysis are proposed as a working hypothesis that can perhaps be supported in the future with new data from other complementary regions of America or with more intense surveys in the areas already *** are inconsistent with the hypothesis of cosmopolitan distribution for these microorganisms,as they appear to indicate groups of species that are restricted to certain geographic areas,some of which may be endemic,such as those from the subantarctic forests of South America,those found exclusively in the South American arid areas or those that have been recently described from arid ar

关键词： Andean region Distribution patterns Myxomycetes Nearctic neotropics Ubiquity theory

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On the presence of the giant freshwater prawn,Macrobrachium rosenbergii,in French Guiana confirmed by citizen science and genetic analyses

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Water Biology and Security 2022年第2期1卷 112-118页

作者： Jerome Murienne Johan Chevalier Simon Clavier Laboratoire Evolution et Diversite Biologique(EDB UMR5174)Universite Toulouse 3 Paul Sabatier CNRSIRD118 route de Narbonne31062Toulouse CedexFrance Wano Guyane 220 rue du yopoto Claude Charles97319Awala YalimapoGuyane FrançaiseFrance Onikha pk9 route degrad Saramaca97310KourouGuyane FrançaiseFrance

We report for the first time the presence of self-sustaining populations of Macrobrachium rosenbergii in French *** analyses of the cytochrome c oxidase subunit I marker(COI)confirmed the identity of the species as well as historical records about the introduction of the species from commercial *** the limited presence of Macrobrachium rosenbergii in French Guiana,the species is recorded in several river basins,including two where the species has never been *** suggests that the species is able to disperse locally and highlights its potential invasive nature in the territory.

关键词： Amazonia Biological invasion Exotic species neotropics

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Geastrum hyalinum(Basidiomycota,Geastraceae),a new species from Brazilian Southern Amazon

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Studies in Fungi 2019年第1期4卷 90-96页

作者： Assis NM Freitas-Neto JF Sousa JO Barbosa FR Baseia IG Programa de Pós-Graduação em Sistemática e Evolução Centro de BiociênciasUniversidade Federal do RioGrande do NorteAv.Senador Salgado Filho3000Campus Universitário59072-970NatalRNBrazil Departamento de Botânica e Zoologia Centro de BiociênciasUniversidade Federal do Rio Grande do NorteAv.Senador Salgado Filho3000Campus Universitário59072-970NatalRNBrazil Instituto de Ciências Naturais Humanas e SociaisUniversidade Federal de Mato Grosso78557-267SinopMTBrazil

The genus Geastrum *** cosmopolitan distribution and can be found in humid,arid or semi-arid *** hyalinum is a new species found in the Brazilian Southern Amazon in the Rio Ronuro Ecological *** new species can be recognized by its hyaline microscopic structures,such as peridium hyphae,capillitium and spores;indeed,this character is unusual for the genus ***,discussion and photographs of this new taxon are given.

关键词： Biodiversity Earthstar Gasteromycetes neotropics Taxonomy

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A chronosequence analysis of forest recovery on abandoned agricultural fields in Nicaragua

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Journal of Forestry Research 2009年第3期20卷 213-222,286页

作者： Guillermo Castro Marín Mulualem Tigabu Benigno González-Rivas Per Christer Odén Facultad de Recursos Naturales y del Ambiente Universidad Nacional Agraria Swedish University of Agricultural Sciences Faculty of Forest Sciences Southern Swedish Forest Research Centre Tropical Silviculture and Seed Laboratory

Species composition, diversity and population structure of woody species recovered on three abandoned agricultural fields after 4, 9 and 14 years were characterized. Seedlings, saplings/poles and mature trees were identified and counted in 70 plots of 100 m2 in each abandoned site. A total of 13, 29 and 22 families represented by 17, 48 and 44 species were registered in 4-, 9-and 14-year-old stands, respectively. There was a shift in dominant species across successional stages. Lonchocarpus acuminatus had the highest importance value in the 4-year old stand, whereas, Myrospermun frutescens, Guazuma ulmifolia and Cordia alliodora had the highest importance value in the 9-year-old-stand and Caesaeria corymbosa, Muntingia calabura, Gliricidia sepium and Tabebuia rosea in the 14-year-old stand. The total stem density increased from 5011 to 9631 individuals per hectare as the age of abandonment increased from 4 to 14 years. The total basal area of individuals ≥ 1cm d.b.h. also increased with the age of abandonment. Overall, small individuals (< 10 cm dbh) contributed to more than half of the total basal area. Species diversity was the highest in the 9-year old stand followed by 14-and 4-year-old stands. We concluded that floristic composition of secondary forests recovers rapidly to the mature forest level compared to structural attributes, which is consistent with the general successional trajectories of tropical dry forest.

关键词： Central America dry forest neotropics restoration secondary succession abandoned agricultural field forest recovery

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Five New Species of <i>Diplazium</i>Sw. (Athyriaceae) from Nicaragua, Costa Rica and Colombia

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American Journal of Plant Sciences 2018年第5期9卷 933-945页

作者： Alexander Francisco Rojas-Alvarado Universidad Nacional Heredia Costa Rica

Five new species are described in the genus Diplazium Sw. from Nicaragua, Costa Rica and Colombia, as results of studies in the Neotropical ferns. The new species are Diplazium chirripoense A. Rojas, Diplazium cornutum A. Rojas, Diplazium crassirhizoma A. Rojas, Diplazium lustrosum A. Rojas and Diplazium rodriguezii A. Rojas. The first species is related to D. skutchii Lellinger, but differs from it by having glabrous stipe, glabrous blade abaxially, hyaline and entire indusia, and distributed and higher elevations. The second species is different to D. diplazioides (Klotzsch et H. Karst.) Alston by having densely scaly stipe, rachis and costa, relative bigger pinnae and entire to erose indusia. After that, the third species differs from D. werckleanum Christ by thicker rhizome, bigger rhizome scales and blade with 1 - 2 buds at apex. Consecutively, the fourth species differs from D. lindbergii (Mett.) H. Christ by thinner rhizome, shorter fronds, longer stipe, smaller blade, less pinnae pairs, shiny laminar tissue and veins 3 - 5 pairs per segment. Finally, the fifth species is related to D. tungurahuae (Sodiro) C. Chr., but with abaxially glabrous rachis and costae, pinnules 4 - 5 times longer than wide and entire, costules adaxially without wings, veins abaxially glabrous and reticulate along costae and between pinnate veins.

关键词： Athyriaceae Diplazium Ferns neotropics Taxonomy

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