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Genetic structure and phylogeography of a relict tree fern,sphaeropteris brunoniana (Cyatheaceae) from China and Laos inferred from cpDNA sequence variations:Implications for conservation

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Journal of Systematics and Evolution 2011年第1期49卷 72-79页

作者： 1,2 Zi-Juan WANG 1 Kai-Yun GUAN 1 (Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650204, China) 2 (Graduate University of Chinese Academy of Sciences, Beijing 100049, China) (Kunming Institute of Botany Chinese Academy of Sciences Kunming 650204 China) (Graduate University of Chinese Academy of Sciences Beijing 100049 China)

In this study, we analyzed the genetic structure and phylogeography of sphaeropteris brunoniana from China and Laos. Combining cpDNA trnL-trnF and atpB-rbcL sequence variations, five haplotypes were identi- fied from the 10 investigated populations. Moderate haplotype diversity (h = 0.66580) and low nucleotide diver- sity (π = 0.23 × 10 ?3 ) were detected. The S. brunoniana in Yunnan region had much higher genetic diversity (h = 0.60195, π = 0.35 × 10 ?3 ) than that of Hainan–Laos (h = 0.00000, π = 0.00). A high level of genetic differentiation (94.74%) between the two regions was revealed by AMOVA. Nested clade analysis identified two major clusters of the five haplotypes, one clade in the Yunnan region and the other in Hainan–Laos. The analysis indicated that restricted gene flow with isolation by distance and allopatric fragmentation were likely the major processes that shaped the spatial distribution of the haplotypes. The isolated distribution of clades implied the emergence of independent refugia of this species in each region during Quaternary glaciations. The Yunnan populations frequently contained an ancestral haplotype, and most of them harbored other descendent haplotypes. Based on the distribution pattern of haplotypes and the nested clade analysis results, the Yunnan region potentially had several refugia of this species during glacial periods, whereas the Hainan populations were probable new colonizations.

关键词： atpB-rbcL Hainan–Laos phylogeography sphaeropteris brunoniana trnL-trnF Yunnan.

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