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A phylogenetic approach identifies patterns of beta diversity and floristic subregions of the Qinghai-Tibet Plateau

Plant Diversity 2024年第1期46卷 59-69页

作者： Haibin Yu Man Yang Zixin Lu Weitao Wang Fangyuan Yu Yonghua Zhang Xue Yin Hongjun Yu Junjie Hu David C.Deane Key Laboratory of Conservation and Application in Biodiversity of South China School of Life SciencesGuangzhou UniversityGuangzhou 510006China School of Ecology Sun Yat-Sen UniversityShenzhen 510275China School of Geography and Remote Sensing Guangzhou UniversityGuangzhou 510006China College of Life and Environmental Science Wenzhou UniversityWenzhou 325035China Centre for Future Landscapes and Department of Environment and Genetics La Trobe UniversityBundooraVIC 3083Australia

Patterns of taxonomic and phylogenetic beta diversity and their relationships with environmental correlates can help reveal the origin and evolutionary history of regional *** Qinghai-Tibet Plateau(QTP)harbors an exceptionally diverse flora,however,a phylogenetic perspective has rarely been used to investigate its beta diversity and floristic *** this study,we used a phylogenetic approach to identify patterns of beta diversity and quantitatively delimit floristic regions on the Qinghai-Tibet *** also examined the relationships between multifaceted beta diversity,geographical distance,and climatic difference,and evaluated the relative importance of various factors(i.e.,climate,topography and history)in shaping patterns of beta diversity.Sørensen dissimilarity indices indicated that patterns of species turnover among sites dominated the *** also found that patterns of both taxonomic and phylogenetic beta diversity were significantly related to geographical distance and climatic *** environmental factors that contributed most to these patterns of beta diversity include annual precipitation,mean annual temperature,climatic gradients and climatic *** dendrograms of dissimilarity and non-metric multidimensional scaling ordination based on phylogenetic beta diversity data identified ten floristic subregions in the *** results suggest that the contemporary environment and historical climate changes have filtered species composition among sites and eventually determined beta diversity patterns of plants in the QTP.

关键词： Biogeographical regionalization Phylogenetic beta diversity seed plants Sørensen dissimilarity Qinghai-Tibet Plateau

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Guazia, the earliest ovule without cupule but with unique integumentary lobes

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National Science Review 2022年第4期9卷 13-20页

作者： De-Ming Wang Le Liu Yi Zhou Min Qin Mei-Cen Meng Yun Guo Jin-Zhuang Xue Key Laboratory of Orogenic Belts and Crustal Evolution Department of GeologyPeking University School of Geoscience and Surveying Engineering China University of Mining and Technology (Beijing) Institute of Geology and Paleontology Linyi University Institute of Deep Time Terrestrial Ecology Institute of PalaeontologyYunnan Key Laboratory of Earth System ScienceYunnan University

The earliest ovules in the Late Devonian(Famennian) are surrounded by a cupule that is involved in both protection and pollination, and generally have free integumentary lobes. Here we report a new taxon from the Famennian of China, Guazia dongzhiensis gen. et sp. nov. The terminally borne ovule is apparently acupulate(without cupule) and has four radially arranged wing-like integumentary lobes that are extensively fused, and folded lengthwise and inwards. Guazia provides evidence that not all Devonian seeds possess a cupule and it increases their diversity in integumentary lobes. This genus also suggests that the integuments develop new functions, probably including wind dispersal at the expense of the cupules.

关键词： ovule cupule integument Devonian seed plants

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Phylogenetic patterns suggest frequent multiple origins of secondary metabolites across the seed-plant ‘tree of life’

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National Science Review 2021年第4期8卷 66-77页

作者： Yongzeng Zhang Tao Deng Lu Sun Jacob B.Landis Michael J.Moore Hengchang Wang Yuehua Wang Xiaojiang Hao Jijun Chen Shenghong Li Maonian Xu Pema-Tenzin Puno Peter H.Raven Hang Sun Missouri Botanical Garden CAS Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of Botany Chinese Academy of Sciences University of the Chinese Academy of Sciences Department of Botany and Plant Sciences University of California Riverside School of Integrative Plant Science Section of Plant Biology and the L.H.Bailey HortoriumCornell University Department of Biology Oberlin College CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture Chinese Academy of Sciences School of Life Science Yunnan University State Key Laboratory of Phytochemistry and Plant Resources in West China Kunming Institute of BotanyChinese Academy of Sciences Pharmaceutical Sciences University of Iceland

To evaluate the phylogenetic patterns of the distribution and evolution of plant secondary metabolites(PSMs), we selected 8 classes of PSMs and mapped them onto an updated phylogenetic tree including 437 families of seed plants. A significant phylogenetic signal was detected in 17 of the 18 tested seed-plant clades for at least 1 of the 8 PSM classes using the D statistic. The phylogenetic signal, nevertheless, indicated weak clustering of PSMs compared to a random distribution across all seed plants. The observed signal suggests strong diversifying selection during seed-plant evolution and/or relatively weak evolutionary constraints on the evolution of PSMs. In the survey of the current phylogenetic distributions of PSMs, we found that multiple origins of PSM biosynthesis due to external selective forces for diverse genetic pathways may have played important roles. In contrast, a single origin of PSMs seems rather uncommon. The distribution patterns for PSMs observed in this study may also be useful in the search for natural compounds for medicinal purposes.

关键词： secondary metabolites phylogenetic tree phylogenetic signal co-diversification evolution bioprospecting seed plants

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Current patterns of plant diversity and phylogenetic structure on the Kunlun Mountains

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Plant Diversity 2022年第1期44卷 30-38页

作者： Wei-Bo Du Peng Jia Guo-Zhen Du State Key Laboratory of Grassland and Agro-Ecosystems School of Life SciencesLanzhou UniversityLanzhouGansu Province730000P.R.China

Large-scale patterns of biodiversity and the underlying mechanisms that regulate these patterns are central topics in biogeography and *** Qinghai-Tibet Plateau serves as a natural laboratory for studying these ***,most previous studies have focused on the entire Qinghai-Tibet Plateau,leaving independent physical geographic subunits in the region less well *** studied the current plant diversity of the Kunlun Mountains,an independent physical geographic subunit located in northwestern China on the northern edge of the Qinghai-Tibet *** integrated measures of species distribution,geological history,and phylogeography,and analyzed the taxonomic richness,phylogenetic diversity,and community phylogenetic structure of the current plant diversity in the *** distribution patterns of 1911 seed plants showed that species were distributed mainly in the eastern regions of the Kunlun *** taxonomic richness,phylogenetic diversity,and genera richness showed that the eastern regions of the Kunlun Mountains should be the priority area of biodiversity conservation,particularly the southeastern *** proportion of Chinese endemic species inhabiting the Kunlun Mountains and their floristic similarity may indicate that the current patterns of species diversity were favored via species *** Hengduan Mountains,a biodiversity hotspot,is likely the largest source of species colonization of the Kunlun Mountains after the *** net relatedness index indicated that 20 of the 28 communities examined were phylo-genetically dispersed,while the remaining communities were phylogenetically *** nearest taxon index indicated that 27 of the 28 communities were phylogenetically *** results suggest that species colonization and habitat filtering may have contributed to the current plant diversity of the Kunlun Mountains via ecological and evolutionary processes,and habitat filtering may play an impor

关键词： Biodiversity Plant community Kunlun mountains Phylogenetic structure seed plants

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Asymmetric migration dynamics of the tropical Asian and Australasian floras

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Plant Diversity 2023年第1期45卷 20-26页

作者： Li-Guo Zhang Xiao-Qian Li Wei-Tao Jin Yu-Juan liu Yao Zhao Jun Rong Xiao-Guo Xiang Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity Institute of Life Science and School of Life SciencesNanchang UniversityNanchang.Jiangxi330031China State Key Laboratory of Systematic and Evolutionary Botany Chinese Academy of SciencesBeijing.100093China

The tropical Asian and Australasian floras have a close relationship,and is a vital distribution pattern of seed plants *** estimated,more than 81 families and 225 genera of seed plants distributed between tropical Asia and ***,the evolutionary dynamics of two floras were still ***,a total of 29 plant lineages,represented the main clades of seed plants and different habits,were selected to investigate the biotic interchange between tropical Asia and Australasia by integrated dated phylogenies,biogeography,and ancestral state *** statistics indicated that 68 migrations have occurred between tropical Asia and Australasia since the middle Eocene except terminal migrations,and the migration events from tropical Asia to Australasia is more than 2 times of the *** 12 migrations occurred before 15 Ma,whereas the remaining56 migrations occurred after 15 *** number of potential dispersal events(MDE) analysis also shows obvious asymmetry,with southward migration as the main feature,and indicates the climax of bi-directional migrations occurred after 15 *** speculate that the formation of island chains after the Australian-Sundaland collision and climate changes have driven seed plant migrations since the middle ***,biotic dispersal and stable habitat may be crucial for floristic interchange between tropical Asia and Australasia.

关键词： Tropical Asia-Australasia Floristic interchange Biogeography Dispersal seed plants

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Relative importance of water, energy, and heterogeneity in determining regional pteridophyte and seed plant richness in China

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Journal of Systematics and Evolution 2011年第2期49卷 95-107页

作者： 1,2,3 Sheng-Bin CHEN § 1 Gao-Ming JIANG 3 Zhi-Yun OUYANG 3 Wei-Hua XU 3 Yi XIAO 1 (State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China) 2 (Graduate University of the Chinese Academy of Sciences, Beijing 100049, China) 3 (State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China) (State Key Laboratory of Vegetation and Environmental Change Institute of Botany Chinese Academy of Sciences Beijing 100093 China) (Graduate University of the Chinese Academy of Sciences Beijing 100049 China) (State Key Laboratory of Urban and Regional Ecology Research Center for Eco-Environmental Sciences Chinese Academy of Sciences Beijing 100085 China)

Environmental variables, such as ambient energy, water availability, and environmental heterogeneity have been frequently proposed to account for species diversity gradients. How taxon-specific functional traits define large-scale richness gradients is a fundamental issue in understanding spatial patterns of species diversity, but has not been well documented. Using a large dataset on the regional flora from China, we examine the contrast spatial patterns and environmental determinants between pteridophytes and seed plants which differ in dispersal capacity and environmental requirements. Pteridophyte richness shows more pronounced spatial variation and stronger environmental associations than seed plant richness. Water availability generally accounts for more spatial variance in species richness of pteridophytes and seed plants than energy and heterogeneity do, especially for pteridophytes which have high dependence on moist and shady environments. Thus, pteridophyte richness is disproportionally affected by water-related variables; this in turn results in a higher proportion of pteridophytes in regional vascular plant floras (pteridophyte proportion) in wet regions. Most of the variance in seed plant richness, pteridophyte richness, and pteridophyte proportion explained by energy is included in variation that water and heterogeneity account for, indicating the redundancy of energy in the study extent. However, heterogeneity is more important for determining seed plant distributions. Pteridophyte and seed plant richness is strongly correlated, even after the environmental effects have been removed, implying functional linkages between them. Our study highlights the importance of incorporating biological traits of different taxonomic groups into the studies of macroecology and global change biology.

关键词： habitat heterogeneity pteridophytes seed plants species richness water-energy hypothesis.

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Axial nature of the cupule-bearing organ in Caytoniales

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Journal of Systematics and Evolution 2010年第3期48卷 207-214页

作者： 1,2Xin WANG 1(Nanjing Institute of Geology and Palaeontology,Chinese Academy of Sciences,Nanjing 210008,China) 2(Fairy Lake Botanical Garden,Shenzhen 518004,China) (Nanjing Institute of Geology and Palaeontology Chinese Academy of Sciences Nanjing 210008 China) (Fairy Lake Botanical Garden Shenzhen 518004 China)

Caytoniales are an important group of seed plants,and the nature of their female reproductive organ may influence interpretations of the seed plant phylogeny and the origin of *** not convincingly demonstrated by clear evidence,cupules on previously described specimens were interpreted as being distichously arranged,implying that the cupule-bearing organ in Caytoniales was a pinnate *** a female reproductive organ of Paracaytonia hongtaoi *** ***.(Caytoniales)is reported from Liaoning,*** well preserved specimen clearly shows a spiral arrangement of cupules along the reproductive axis,suggesting that the cupule-bearing organ in Caytoniales is not a megasporophyll but a *** new information on the axial nature of the cupule-bearing organ in Caytoniales has significant implications on the placement of Caytoniales in the seed plant phylogeny and interpretation of the relationship between Caytoniales and angiosperms.

关键词： angiosperms Caytoniales cupule evolution Paracaytonia seed plants systematics Yixian Formation.

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