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rhizobium Inoculation and Micronutrient Addition Influence the Growth,Yield,Quality and Nutrient Uptake of Garden Peas(Pisum sativum L.)

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Phyton-International Journal of Experimental Botany 2024年第5期93卷 901-922页

作者： MdAbdul Quddus MdAtaur Rahman Razu Ahmed Mohammad Eyakub Ali Khokan Kumer Sarker MdAlamgir Siddiky Mohibur Rahman Lamya Ahmed Alkeridis Samy Sayed Ahmed Gaber Akbar Hossain Horticulture Research Centre Bangladesh Agricultural Research InstituteGazipur1701Bangladesh Soil Science Division Bangladesh Agricultural Research InstituteGazipur1701Bangladesh Irrigation and Water Management Division Bangladesh Agricultural Research InstituteGazipur1701Bangladesh Regional Agricultural Research Station Bangladesh Agricultural Research InstituteCumilla3500Bangladesh Department of Biology College of SciencePrincess Nourah Bint Abdulrahman UniversityP.O.Box 84428Riyadh11671Saudi Arabia Department of Science and Technology University College‑RanyahTaif UniversityP.O.Box 11099Taif21944Saudi Arabia Department of Economic Entomology and Pesticides Faculty of AgricultureCairo UniversityGiza12613Egypt Department of Genetics Faculty of AgricultureCairo UniversityGiza12613Egypt Department of Biology College of ScienceTaif UniversityTaif21944Saudi Arabia Division of Soil Science Bangladesh Wheat and Maize Research InstituteDinajpur5200Bangladesh

Garden pea productivity and qualities are hampered in zinc(Zn),boron(B),and molybdenum(Mo)deficient soil.Thus,the combination of micronutrients(i.e.,Zn,B,and Mo)and rhizobium is necessary to increase the productivity and quality of garden peas,since this management for garden peas is neglected in Bangladesh.Therefore,the present study was made to assess the effectiveness of rhizobium inoculant singly or in combination with the micronutrients(i.e.,Zn,B,and Mo)on growth,yield,nutrient uptake,and quality of garden peas.Treatments were:T_(1)=Control,T_(2)=rhizobium inoculation at 50 g/kg seed,T_(3)=T_(2)+Zn_(3)Mo1,T_(4)=T_(2)+B_(2)Mo1,T_(5)=T_(2)+Zn_(3)B_(2),T_(6)=T_(2)+Zn_(3)B_(2)Mo1 and T_(7)=Zn_(3)B_(2)Mo1.All treatments were arranged in a randomized complete block design and repeated all treatments in three times.The application of 3 kg Zn,2 kg B,and 1 kg Mo ha^(−1)with inoculation of rhizobium at 50 g kg^(−1)seed(T_(6))facilitated to increase of 44.8%in the green pod and 29.7%seed yield over control.The same treatment contributed to attaining the maximum nodulation(25.3 plant^(−1)),Vitamin C(43.5 mg 100 g^(−1)),protein content(22.2%),and nutrient uptake as well as accumulation in garden peas.Among all treatment combinations,treatment T_(6)was found superior to others based on microbial activities,soil fertility,and profitability.The results of the study found that the application of 3 kg Zn,2 kg B,and 1 kg Mo ha^(−1)in combination with rhizobium inoculation(50 g kg^(−1)seed)can improve the yield and quality of garden peas.The results of the study have the potential for the areas,where there is no use of rhizobium inoculant or Zn,B,and Mo fertilizer for cultivation of garden pea.

关键词： Nodulation nutrient content Pisum sativum L. profitability rhizobium Zn B Mo

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rhizobium Lipo-chitooligosaccharide Signaling Triggers Accumulation of Cytokinins in Medicago truncatula Roots

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Molecular Plant 2015年第8期8卷 1213-1226页

作者： Arjan van Zeijl Rik H.M. Op den Camp Eva E. Deinum Tatsiana Charnikhova Henk Franssen Huub J.M. Op den Camp Harro Bouwmeester Wouter Kohlen Ton Bisseling Rene Geurts Department of Plant Sciences Laboratory of Molecular Biology Wageningen University Droevendaalsesteeg 16708 PB Wageningen The Netherlands Department of Systems Biophysics FOM institute AMOLF Science Park 104 1098 XG Amsterdam The Netherlands Department of Plant Sciences Laboratory of Plant Physiology Wageningen University Droevendaalsesteeg 1 6708 PB Wageningen The Netherlands Department of Microbiology IWWR Radboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands College of Science King Saud University Post Office Box 2455 Riyadh 11451 Saudi Arabia

Legume rhizobium symbiosis is initiated upon perception of bacterial secreted lipo-chitooligosaccharides （LCOs）. Perception of these signals by the plant initiates a signaling cascade that leads to nodule formation. Several studies have implicated a function for cytokinin in this process. However, whether cytokinin accu- mulation and subsequent signaling are an integral part of rhizobium LCO signaling remains elusive. Here, we show that cytokinin signaling is required for the majority of transcriptional changes induced by rhizo- bium LCOs. In addition, we demonstrate that several cytokinins accumulate in the root susceptible zone 3 h after rhizobium LCO application, including the biologically most active cytokinins, trans-zeatin and iso- pentenyl adenine. These responses are dependent on calcium- and calmodulin-dependent protein kinase （CCaMK）, a key protein in rhizobial LCO-induced signaling. Analysis of the ethylene-insensitive Mtein21 Mtsickle mutant showed that LCO-induced cytokinin accumulation is negatively regulated by ethylene. Together with transcriptional induction of ethylene biosynthesis genes, it suggests a feedback loop negatively regulating LCO signaling and subsequent cytokinin accumulation. We argue that cytokinin accumulation is a key step in the pathway leading to nodule organogenesis and that this is tightly controlled by feedback loops.

关键词： Medicago truncatula cytokinin ethylene rhizobium lipo-chitooligosaccharides CRE1

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STUDIES ON HETEROLOGOUS EXPRESSION OF rhizobium meliloti nifA GENE AND OXYGEN SENSITIVITY OF ITS PRODUCT

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Science China Chemistry 1991年第1期34卷 71-77页

作者：王水平朱家壁俞冠翘吴一飞沈善炯 Laboratory of Molecular Genetics Shanghai Institute of Plant Physiology Academia Sinica Shanghai 200032 PRC

When the R. meliloti (Rm) nifA’-lacZ fusion-carrying plasmids were introduced intothe strains of Agrobacterium tumefaciens, R. trifolii and R. astragalus, β-galactosidaseactivity was demonstrated. However, activity was not induced by microaerobiosis. Further-more, R. meliloti nifA’-lacZ fusion was also not expressed in the nodule bacteroids ofR. trifolii and R. astragalus. We speculate that some factor(s) important for the inductionof Rm nifA presumed to be the fixLJ regulatory system would not be operative in thesebacteria. Experiments using R. meliloti nifH’-lacZ/ K. Pneumoniae nifH’-lacZ fusion and theconstitutive Rm nifA system to test the nifA-dependent expression of nifH’-lacZ underaerobic and microaerobic conditions in E. coli were performed. The inhibition of the RmnifA activation of nifH’-lacZ expression in the bacteria grown in the aerobic conditionwas shown. Assays on the Rm nifA-m RNA produced by the constitutive Rm nifA in E.coli under aerobic and microaerobic conditions with the cloned

关键词： rhizobium meliloti nifA gene gene expression oxygen sensitivity

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Inhibition of nodule development by multicopy promoters of rhizobium meliloti nif/fix genes

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Science China Chemistry 1995年第9期38卷 1108-1116页

作者：吴桐朱家璧俞冠翘沈善炯 Laboratory of Molecular Genetics Shanghai Institute of Plant PhysiologyChinese Academy of SciencesShanghai 200032China

Using luc gene as a reporter to study the activation of rhizobium meliloti nif/fix genes in thedevelopment of symbiosis,the authors observed that nodule development and nitrogen fixation were inhibitedby both multicopy promoters of nifHDK and fixABCX.The phenotype of R.meliloti containing multicopynif/fix promoters appeared exactly like that of nifA mutant.Using lacZ as a reporter,the authors got the same re-sults.By contrast,the rhizobia containing low-copy promoters of nif/fix genes were normal fornodule development and nitrogen fixation.These results substantiate the evidence that the product of nifAgene not only acts as a transcriptional activator of nif/fix genes,but also plays an important role in thedevelopment of root nodules.

关键词： rhizobium meliloti multicopy nifA.

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A rhizobium bacterium and its population dynamics under different culture conditions of its associated toxic dinoflagellate Gambierdiscus balechii

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Marine Life Science & Technology 2021年第4期3卷 542-551页

作者： Zhen Wu Xiaohong Yang Senjie Lin Wai Hin Lee Paul K.S.Lam State Key Laboratory of Marine Pollution City University of Hong KongHong KongChina Department of Chemistry City University of Hong KongHong KongChina State Key Laboratory of Marine Environmental Science Xiamen UniversityXiamen 361005China Department of Marine Sciences University of ConnecticutGrotonCT 06340USA Department of Biomedical Sciences City University of Hong KongHong KongChina Shenzhen Key Laboratory for the Sustainable Use of Marine Biodiversity Research Centre for the Oceans and Human HealthCity University of Hong Kong Shenzhen Research InstituteShenzhen 518057China

rhizobium bacteria are known as symbionts of legumes for developing nodules on plant roots and fixing N2 for the host plants but unknown for associations with dinoflagellates.Here,we detected,isolated,and characterized a rhizobium species from the marine toxic dinoflagellate Gambierdiscus culture.Its 16S rRNA gene(rDNA)is 99%identical to that of rhizobium rosettiformans,and the affiliation is supported by the phylogenetic placement of its cell wall hydrolase-encoding gene(cwh).Using quantitative PCR of 16S rDNA and cwh,we found that the abundance of this bacterium increased during the late exponential growth phase of Gambierdiscus and under nitrogen limitation,suggesting potential physiological interactions between the dinoflagellate and the bacterium.This is the first report of dinoflagellate-associated rhizobium bacterium,and its prevalence and ecological roles in dinoflagellate-rhizobium relationships remain to be investigated in the future.

关键词： rhizobium Gambierdiscus 16S rRNA gene Cell wall hydrola Edited by Chengchao Chen

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Further Studies on Structure of nodD3 Gene in rhizobium meliloti——Analysis of 5'Non-Coding Region of nodD3 and Its Evolutionary Implications

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Science China Chemistry 1994年第8期37卷 975-983页

作者：俞冠翘朱家璧高云峰沈善炯 Laboratory of Molecular Genetics Shanghai Institute of Plant PhysiologyAcademia SinicaShanghai 200032PRC

R.meliloti nodD3 gene is transcriptionally controlled by two promoters.Gel retardationexperiments show that SyrM and NodD3 are binding to the first promoter region of nodD3,while no proteinfactor is found to bind to the second promoter region of the gene.Comparison has been made between 5′ non-coding region of nodD3 and the corresponding region upstream of nodD1.The presence of nod-box andnodA-like sequences in the 5′ noncoding region of nodD3 supports the hypothesis that nodD3 evolves withthe duplication of the nodD1-nodA fragment during the speciation of R.meliloti.

关键词： rhizobium meliloti nodD3 regulation evolution

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Regulatory role of the sequences downstream from nodD3 P1 promoter of rhizobium meliloti

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Chinese Science Bulletin 2000年第1期45卷 60-64页

作者： Bing Zhu Xiaomi Dai Jiabi Zhu Guanqiao Yu Shanjiong Shen Chinese Acad Sci Shanghai Inst Plant Physiol Shanghai 200032 Peoples R China

The 660 bp region between nodD3 P1 promoter and the following coding region of Rnizopium meliloti has been studied. This region is designated 'downstream sequences' . it consists of two potential open reading frames, ORF1 and ORF2. Studies on the role of the downstream sequences on the activity of nooD3 P1 with nod D3(P1)-/acZ fusion show that deletion of the seguences containing ORF2 causes the increase of the activity of the fusion; on the contrary, addition of extra copies of ORF2 markedly decreases the activity of the fusion. These results indicate that the product of ORF2 plays a negative role in the expression of nod D3.

关键词： rhizobium meliloti nodD3P1 gene regulation downstream sequences.

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A functional approach toward xerogel immobilization for encapsulation biocompatibility of rhizobium toward biosensor

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Frontiers in Biology 2013年第6期8卷 626-631页

作者： Pooja Arora Sunita Sharma Sib Krishna Ghoshal Neeraj Dilbaghi Ashok Chaudhury Department of Bio and Nano Technology Guru Jambheshwar University of Science and Technology Hisar-125001 Haryana India Light and Matter Physics Group Raman Research Institute Bangalore India Physics Department University Teknologi of Malaysia Malaysia

Sol-gel derived silica has tremendous applications as a biocompatible scaffold for the immobilization of cells. The use of xerogel as a matrix in the blueprint of biosensors is an appealing proposition due to several inimitable characteristics of xerogels, primarily because of their high porous nature, amendable pore size, and exceptionally large internal surface area. Morphological （X-Ray Diffraction and Thermogravimmetric Analysis） and optical （Fourier Transform Infrared and UV-Vis absorption） studies of the silica matrices with entrapped Rhizobial （Rz） structure of the biomaterial has been made. Temporal and concentration dependent studies were conducted for impregnated samples; it showed that the response time for the new biosensor for determining the concentration of Rz is less than 20 min. In this work, first time a novel avenue to create a generic approach for the fabrication of biosensor has been created.

关键词： biosensor Fourier Transform Infrared spectroscopy （FTIR） rhizobium Thermo Gravimmetric Analysis （TGA） sol-gel xerogel X-Ray Diffraction （XRD）

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Cell-specific pathways recruited for symbiotic nodulation in the Medicago truncatula legume

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Molecular Plant 2022年第12期15卷 1868-1888页

作者： Sergio Alan Cervantes-Pérez Sandra Thibivilliers Carole Laffont Andrew D.Farmer Florian Frugier Marc Libault Department of Agronomy and Horticulture Center for Plant Science InnovationUniversity of Nebraska-LincolnLincolnNE 68503USA Single Cell Genomics Core Facility Center for BiotechnologyUniversity of Nebraska-LincolnLincolnNE 68588USA Institute of Plant Sciences Paris-Saclay(IPS2) UniversitéParis-SaclayCNRSINRAEUniversitéParis-CitéUniversitéd’Evry91190 Gif-sur-YvetteFrance National Center for Genome Resources Santa FeNM 87505USA

Medicago truncatula is a model legume species that has been studied for decades to understand the symbiotic relationship between legumes and soil bacteria collectively named rhizobia.This symbiosis called nodulation is initiated in roots with the infection of root hair cells by the bacteria,as well as the initiation of nodule primordia from root cortical,endodermal,and pericycle cells,leading to the development of a new root organ,the nodule,where bacteria fix and assimilate the atmospheric dinitrogen for the benefit of the plant.Here,we report the isolation and use of the nuclei from mock and rhizobia-inoculated roots for the single nuclei RNA-seq(sNucRNA-seq)profiling to gain a deeper understanding of early responses to rhizobial infection in Medicago roots.A gene expression map of the Medicago root was generated,comprising 25 clusters,which were annotated as specific cell types using 119 Medicago marker genes and orthologs to Arabidopsis cell-type marker genes.A focus on root hair,cortex,endodermis,and pericycle cell types,showing the strongest differential regulation in response to a short-term(48 h)rhizobium inoculation,revealed not only known genes and functional pathways,validating the sNucRNA-seq approach,but also numerous novel genes and pathways,allowing a comprehensive analysis of early root symbiotic responses at a cell type-specific level.

关键词： Medicago root single-cell transcriptomic rhizobium nodule initiation root hair cells cortical cells

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High efficient broad-spectrum Bradyrhizobium elkanii Y63-1

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Oil Crop Science 2023年第4期8卷 228-235页

作者： Piao Leng Fuxiao Jin Song Li Yi Huang Chanjuan Zhang Zhihui Shan Zhonglu Yang Limiao Chen Dong Cao Qingnan Hao Wei Guo Hongli Yang Shuilian Chen Xinan Zhou Songli Yuan Haifeng Chen Oil Crops Research Institute of Chinese Academy of Agricultural Sciences/Key Laboratory of Biology and Genetic Improvement of Oil Crops Ministry of Agriculture and Rural AffairsWuhan430062China

Soybean(Glycine max),the primary source of high-quality plant protein,plays a crucial role as a grain and oil crop in China.Harnessing the full potential of symbiotic nitrogen fixation in soybean production holds immense significance for agriculture and ecology alike.Zhongdou 63,a newly developed early-maturing summer soybean cultivar in 2021,exhibits remarkable traits such as high yield,superior quality,multi-resistance,and wide adaptability.In this study,eight distinct rhizobia strains from diverse regions were meticulously screened to identify highly effective strains specifically suited for Zhongdou 63.The aboveground biomass,plant height,chlorophyll content,root length,nodule number,and nodule dry weight of Zhongdou 63 were measured and the data were subjected to statistical analysis.The results demonstrated that Y63-1 is a predominant strain of Zhongdou 63.Subsequently,we conducted further investigations on the broad-spectrum nodulation characteristics of Y63-1.Ten representative soybean cultivars were individually inoculated with Y63-1 and subsequently analyzed for nodule numbers and nodule dry weight in their symbiotic systems with rhizobia.The findings revealed that Y63-1 effectively formed nodules with all ten soybean varieties tested.In summary,our current study identified highly efficient broad-spectrum Bradyrhizobium elkanii strain Y63-1 as the predominant strain in Zhongdou 63 and provided a theoretical foundation for enhancing yield potential not only in Zhongdou 63 but also in other varieties through inoculation with highly efficient rhizobia in production.

关键词： Soybean rhizobium Nodule symbiosis Nodulation Broad spectrum

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