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bacterial communities associated with natural and commercially grown rooibos (Aspalathus linearis)

Pedosphere 2020年第6期30卷 778-790页

作者： Casparus J.BRInK Anneke POSTMA Etienne SLABBERT Ferdinand POSTMA A.Muthama MUASYA Karin JACOBS Department of Microbiology University of StellenboschPrivate Bag X1Stellenbosch 7600South Africa Central Analytical Facility University of StellenboschPrivate Bag X1Stellenbosch 7602South Africa Department of Biological Sciences University of Cape TownPrivate Bag X3Rondebosch 7701South Africa

Aspalathus linearis is a commercially important plant species endemic to the Cape Floristic Region of South Africa and is used to produce a herbal tea known as rooibos *** interactions between *** and soil bacteria play an important role in the survival of Aspalathus plants in the highly nutrient-poor,acidic fynbos *** aim of this study was to characterize and compare rhizosphere and bulk soil bacterial communities associated with natural and commercially grown ***,as well as the effect of seasonal changes on these *** communities were characterized using high throughput amplicon sequencing,and their correlations with soil chemical properties were *** n-fixing bacterial community was characterized using terminal restriction fragment length polymorphism and real time quantitative polymerase chain ***,Proteobacteria,and Acidobacteria were the most dominant bacterial phyla detected in this *** similar bacterial communities were associated with natural and commercially grown *** differences in the bacterial community were observed between rhizosphere and bulk soils collected in the dry season,while no significant differences were detected in the wet *** study provides insights into bacterial community structure and potential factors shaping bacterial community structure with commercially important ***.

关键词： bulk soil fynbos n-fixing bacterial community operational taxonomic unit rhizosphere soil 16S rRnA sequencing

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