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Importance of periphytic biofilms for carbon cycling in paddy fields:A review

Pedosphere 2024年第1期34卷 36-43页

作者： Lei ZHOU Yonghong WU Junzhuo LIU Pengfei SUN Ying XU Jan DOLFING Robert GMSPENCER Erik JEPPESEN State Key Laboratory of Soil and Sustainable Agriculture Institute of Soil ScienceChinese Academy of SciencesNanjing 210008China Zigui Three Gorges Reservoir Ecosystem Observation and Research Station of Ministry of Water Resources of the People's Republic of ChinaYichang 443605China College of Nanjing University of Chinese Academy of SciencesNanjing 211135China Faculty of Energy and Environment Northumbria UniversityNewcastle upon Tyne NE18QHUK Department of Earth Ocean and Atmospheric ScienceFlorida State UniversityTallahassee FL 32306USA Department of Ecoscience&Centre for Water Technology(WATEC) Aarhus UniversityAarhus DK-8000Denmark Sino-Danish Centre for Education and Research Beijing 100049China Limnology Laboratory Department of Biological Sciences and Centre for Ecosystem Research and Implementation(EKOSAM)Middle East Technical UniversityAnkara 06800Turkiye Institute of Marine Sciences Middle East Technical UniversityMersin 33731Turkiye

Paddy fields play an important role in global carbon(C) cycling and are an important source of methane(CH_(4)) emissions. Insights into the processes influencing the dynamics of soil organic C(SOC) in paddy fields are essential for maintaining global soil C stocks and mitigating climate change. Periphytic biofilms composed of microalgae, bacteria, and other microorganisms are ubiquitous in paddy fields, where they directly mediate the transfer of elements at the soil-water interface. However, their contributions to C turnover and exchange have been largely neglected. Periphytic biofilms affect and participate in soil C dynamics by altering both abiotic(e.g., pH and redox potential) and biotic conditions(e.g., microbial community composition and metabolism). This review summarizes the contributions of periphytic biofilms to soil C cycling processes, including carbon dioxide fixation, SOC mineralization, and CH_(4) emissions. Future research should be focused on: i) the mechanisms underlying periphytic biofilm-induced C fixation and turnover and ii) quantifying the contributions of periphytic biofilms to soil C uptake, stabilization, and sequestration in paddy fields.

关键词： carbon fixation carbon mineralization carbon sequestration methane emission microbial aggregates soil organic carbon

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Periphytic biofilms-mediated microbial interactions and their impact on the nitrogen cycle in rice paddies

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Eco-Environment & Health 2022年第3期1卷 172-180页

作者： Zhihao Chen Jan Dolfing Shunyao Zhuang Yonghong Wu State Key Laboratory of Soil and Sustainable Agriculture Institute of Soil ScienceChinese Academy of SciencesNanjing 210008China Zigui Three Gorges Reservoir Ecosystem Observation and Research Station of Ministry of Water Resources of the People's Republic of ChinaYichang 443605China University of Chinese Academy of Sciences Beijing 100049China Faculty of Energy and Environment Northumbria UniversityNewcastle Upon Tyne NE18QHUK

Rice paddies are unique waterlogged wetlands artificially constructed for agricultural production.Periphytic biofilms(PBs)at the soil–water interface play an important role in rice paddies characterized by high nutrient input but low utilization efficiency.PBs are composed of microbial aggregates,including a wide variety of microorganisms(algae,bacteria,fungi,protozoa,and metazoa),extracellular polymeric substances and minerals(iron,aluminum,and calcium),which form an integrated food web and energy flux within a relatively stable micro-ecosystem.PBs are crucial to regulate and streamline the nitrogen cycle by neutralizing nitrogen losses and improving rice production since PBs can serve as both a sink by capturing surplus nitrogen and a source by slowly re-releasing this nitrogen for reutilization.Here the ecological advantages of PBs in regulating the nitrogen cycle in rice paddies are illustrated.We summarize the key functional importance of PBs,including the intricate and delicate community structure,microbial interactions among individual phylotypes,a wide diversity of selfproduced organics,the active adaptation of PBs to constantly changing environments,and the intricate mechanisms by which PBs regulate the nitrogen cycle.We also identify the future challenges of microbial interspecific cooperation in PBs and their quantitative contributions to agricultural sustainability,optimizing nitrogen utilization and crop yields in rice paddies.

关键词： Periphytic biofilms microbial aggregates Regulation Nitrogen cycle

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