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Recent advances in genome-scale engineering in Escherichia coli and their applications

engineering Microbiology 2024年第1期4卷 28-38页

作者： Hui Gao Zhichao Qiu Xuan Wang Xiyuan Zhang Yujia Zhang Junbiao Dai Zhuobin Liang Institute of Molecular Physiology Shenzhen Bay LaboratoryShenzhen 518132China CAS Key Laboratory of Quantitative engineering Biology Guangdong Provincial Key Laboratory of Synthetic Genomics and Shenzhen Key Laboratory of Synthetic Genomics.Shenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen 518055China Regenerative Medicine Program Bellvitge Institute for Biomedical Research(IDIBELL)and Program for Clinical Translation of Regenerative Medicine in Catalonia(P-CMRC)L’Hospitalet de LlobregatBarcelona 08908Spain Faculty of Pharmacy and Food Science Barcelona UniversityBarcelona 08028Spain College of Life Sciences Northwest A&F UniversityShaanxi 712100China Shenzhen Branch Guangdong Laboratory for Lingnan Modern AgricultureKey Laboratory of Synthetic BiologyMinistry of Agriculture and Rural AffairsAgricultural Genomics Institute at ShenzhenChinese Academy of Agricultural SciencesShenzhen 518120China

Owing to the rapid advancement of genome engineering technologies,the scale of genome engineering has expanded *** editing has progressed from one genomic alteration at a time that could only be employed in few species,to the simultaneous generation of multiple modifications across many genomic loci in numerous *** development and recent advances in multiplex automated genome engineering(MAGE)-associated technologies and clustered regularly interspaced short palindromic repeats and their associated protein(CRISPR-Cas)-based approaches,together with genome-scale synthesis technologies offer unprecedented opportunities for advancing genome-scale engineering in a broader *** approaches provide new tools to generate strains with desired phenotypes,understand the complexity of biological systems,and directly evolve a genome with novel ***,we review the recent major advances in genome-scale engineering tools developed for Escherichia coli,focusing on their applications in identifying essential genes,genome reduction,recoding,and beyond.

关键词： genome-scale engineering E.coli Recombineering CRISPR-Cas

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