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ShCTR1 Interacts with ShRBOH1 to Positively Regulate aerenchyma Formation in Saussurea inversa through ROS Mediation

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Phyton-International Journal of Experimental Botany 2024年第5期93卷 1023-1042页

作者： Wubin Dai Xiuting Ju Guomin Shi Jialei Guo Tao He School of Agriculture and Animal Husbandry Qinghai UniversityXining810016China Key Laboratory of Landscape Plants of Qinghai Province Qinghai UniversityXining810016China School of Ecol-Environmental Engineering Qinghai UniversityXining810016China State Key Laboratory of Plateau Ecology and Agriculture Qinghai UniversityXining810016China

Saussurea inversa is one of the Tibetan medicine with developed aerenchyma.In this study,we investigated the function of the ShCTR1 gene related to the formation of aerenchyma.The study of the occurrence and formation of aerenchyma in S.inversa has certain theoretical significance in revealing the special mechanism of alpine plants adapting to the environment.The results of yeast two-hybrid experiments showed that S.inversa ShCTR1 interacted with the ShRBOH1,which is a key producer of reactive oxygen species(ROS),and it was hypothesized that ShCTR1 regulation of aerenchyma formation in S.inversa mainly mediated by ROS.aerenchyma induction and inhibition experiments were carried out on S.inversa seedlings,it was shown that ROS inducer(AT)and Ethene(ETH)induced the formation of aerenchyma in S.inversa well in roots,stems,and leaves,and Ethylene inhibitor(1-MCP)and ROS inhibitor DPI(diphenylene iodonium)inhibited the formation of aerenchyma of S.inversa in different degrees,which proved that ROS and ethylene(ET)were positively correlated with the formation of aerenchyma.Meanwhile,AT and ETH well induced the expression of the ShCTR1 gene,and 1-MCP and DPI inhibited the expression of the ShCTR1 gene to different degrees,which proved that ROS and ET were also positively correlated with the expression of the ShCTR1 gene.ShCTR1 was transferred into tobacco(Nicotiana tabacum L.),then repeat the above experiment.It was shown that positive rate and porosity were lowest and highest after DPI and AT treatments,respectively,it showed a positive correlation,which proved that the ShCTR1 gene was positively regulating the formation of aerenchyma.Overexpression of the ShCTR1 gene increased the content of ROS,consequently,the regulation of aerenchyma formation by the ShCTR1 gene is mainly mediated by ROS.It suggested that the formation of aerenchyma in S.inversa was related to hypoxia in the alpine environment,and ShCTR1 interacts with ShRBOH1 to positively regulate the formation of aerenchyma mainly mediated by ROS.

关键词： Saussurea inversa aerenchyma ROS gene function

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Floating plants reduced methane fluxes from wetlands by creating a habitat conducive to methane oxidation

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Journal of Environmental Sciences 2024年第1期135卷 149-160页

作者： Fuwei Wang Songhe Zhang Xiuren Hu Xin Lv Min Liu Yu Ma Benjamin Manirakiza Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes Ministry of EducationHohai UniversityNanjing 210098China College of Environment Hohai UniversityNanjing 210098China China Machinery International Engineering Desigh and Research Institute co. Ltd.East China Regional CenterNanjing 210008China

Wetlands are one of the important natural sources of atmospheric methane (CH_4),as an important part of wetlands,floating plants can be expected to affect methane release.However,the effects of floating plants on methane release are limited.In this study,methane fluxes,physiochemical properties of the overlying water,methane oxidation potential and rhizospheric bacterial community were investigated in simulated wetlands with floating plants Eichhornia crassipes,Hydrocharis dubia,and Trapa natans.We found that E.crassipes,H.dubia,and T.natans plants could inhibit 84.31%-97.31%,4.98%-88.91%and 43.62%-92.51%of methane fluxes at interface of water-atmosphere compared to Control,respectively.Methane fluxes were negatively related to nutrients concentration in water column but positively related to the aerenchyma proportions of roots,stems,and leaves.At the same biomass,root of E.crassipes (36.44%) had the highest methane oxidation potential,followed by H.dubia (12.99%) and T.natans (11.23%).Forty-five bacterial phyla in total were identified on roots of three plants and 7 bacterial genera (2.10%-3.33%) were known methanotrophs.Type I methanotrophs accounted for 95.07%of total methanotrophs.The pmoA gene abundances ranged from 1.90×10^(16)to 2.30×10^(18)copies/g fresh weight of root biofilms.Abundances of pmoA gene was significantly positively correlated with environmental parameters.Methylotrophy (5.40%) and methanotrophy (3.75%) function were closely related to methane oxidation.This study highlights that floating plant restoration can purify water and promote carbon neutrality partially by reducing methane fluxes through methane oxidation in wetlands.

关键词： Floating plants Methane fluxes aerenchyma Methanotrophs

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Methane Emission from Rice Fields:Necessity for Molecular Approach for Mitigation

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Rice science 2024年第2期31卷 159-178页

作者： Sujeevan RAJENDRAN Hyeonseo PARK Jiyoung KIM Soon Ju PARK Dongjin SHIN Jong-Hee LEE Young Hun SONG Nam-Chon PAEK Chul Min KIM Department of Horticulture Industry Wonkwang UniversityIksan 54538Korea Plant Molecular Biology and Biotechnology Research Center Gyeongsang National UniversityJinju 52828Korea Department of Southern Area Crop Science National Institute of Crop ScienceMiryang 50424Korea Department of Agricultural Biotechnology Seoul National UniversitySeoul 08826Korea Department of Plant Science Plant Genomics and Breeding InstituteResearch Institute of Agriculture and Life SciencesSeoul National UniversitySeoul 08826Korea

Anthropogenic methane emissions are a leading cause of the increase in global averagetemperatures,often referred to as global warming.Flooded soils play a significant role in methaneproduction,where the anaerobic conditions promote the production of methane by methanogenicmicroorganisms.Rice fields contribute a considerable portion of agricultural methane emissions,as riceplants provide both factors that enhance and limit methane production.Rice plants harbor both methaneproducingand methane-oxidizing microorganisms.Exudates from rice roots provide source for methaneproduction,while oxygen delivered from the root aerenchyma enhances methane oxidation.Studies haveshown that the diversity of these microorganisms depends on rice cultivars with some genes characterizedas harboring specific groups of microorganisms related to methane emissions.However,there is still aneed for research to determine the balance between methane production and oxidation,as rice plantspossess the ability to regulate net methane production.Various agronomical practices,such as fertilizerand water management,have been employed to mitigate methane emissions.Nevertheless,studiescorrelating agronomic and chemical management of methane with productivity are limited.Moreover,evidences for breeding low-methane-emitting rice varieties are scattered largely due to the absence ofcoordinated breeding programs.Research has indicated that phenotypic characteristics,such as rootbiomass,shoot architecture,and aerenchyma,are highly correlated with methane emissions.This reviewdiscusses available studies that involve the correlation between plant characteristics and methaneemissions.It emphasizes the necessity and importance of breeding low-methane-emitting rice varieties inaddition to existing agronomic,biological,and chemical practices.The review also delves into the idealphenotypic and physiological characteristics of low-methane-emitting rice and potential breeding techniques,drawing from studies conducted with diverse varieties,mutants,and transgenic p

关键词： methane emission rice breeding aerenchyma greenhouse gas radial oxygen loss

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aerenchyma Formed Under Phosphorus Deficiency Contributes to the Reduced Root Hydraulic Conductivity in Maize Roots

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Journal of Integrative Plant Biology 2007年第5期49卷 598-604页

作者： Mingshou Fan Ruiqin Bai Xuefeng Zhao Jianhua Zhang College of Agronomy Inner Mongolia Agricultural University Huhhot 010018 China Department of Biology Hong Kong Baptist University Hong Kong China

Root hydraulic conductivity has been shown to decrease under phosphorus （P） deficiency. This study Investigated how the formation of aerenchyma is related to this change. Root anatomy, as well as root hydraulic conductivity was studied In maize （Zea mays L.） roots under different phosphorus nutrition conditions. Plant roots under P stress showed enhanced degradation of cortical cells and the aerenchyma formation was associated with their reduced root hydraulic conductivity, supporting our hypothesis that air spaces that form in the cortex of phosphorusstressed roots Impede the radial transport of water in a root cylinder. Further evidence came from the variation In aerenchyma formation due to genotypic differences. Five maize inbred lines with different porosity in their root cortex showed a significant negative correlation with their root hydraulic conductivity. Shoot relative water content was also found lower In P-deficient maize plants than that in P-sufficient ones when such treatment was prolonged enough, suggesting a limitation of water transport due to lowered root hydraulic conductivity of P-deficient plants.

关键词： aerenchyma maize （Zea mays） phosphorus deficiency root root hydraulic conductivity.

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Dramatic changes in anatomical traits of a C4 grass Chrysopogon serrulatus Trin.(Poaceae)over a 1000 m elevational gradient

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Journal of Mountain Science 2023年第5期20卷 1316-1335页

作者： FATIMA Sana HAMEED Mansoor AHMAD Farooq AHMAD Muhammad Sajid Aqeel ANWAR Majid MUNIR Mahwish ASHRAF Muhammad SHAH Syed Mohsan Raza BASHARAT Sana AHMAD Iftikhar KHALIL Sangam Department of Botany Government Sadiq College Women UniversityBahawalpur 53100Pakistan Department of Botany University of Agriculture FaisalabadFaisalabad 38040Pakistan Department of Pharmacy Riphah International University Lahore 53770Pakistan Institute of Molecular Biology and Genetic Engineering The University of LahoreLahore 53770Pakistan Department of Botany Division of Science and TechnologyUniversity of EducationLahore 53770Pakistan Department of Forestry Range&Wildlife ManagementThe Islamia University of BahawalpurBahawalpur 53100Pakistan

Chrysopogon serrulatus(false beard-grass)is a dominant component of vegetation in the foothills of the Himalayas.To study whole plant morphology,individuals of C.serrulatus were collected from three plots at each of six locations spanning from 400 to 1,400 m.The population colonizing the highest elevation modifications in different plant organs.Roots showed increased metaxylem number and area.In the stem,especially outside of the vascular tissue,there was intensive sclerification indicative of increased xeromorphy as a survival strategy.At the highest elevation,leaves were wider;aerenchyma formation and increased sclerification were noted in the leaf sheath;and a greater proportion of storage parenchyma was observed in the leaf blade,all indicators of succulence.In contrast,leaves at lower elevations had xeric morphological features such as increased epidermal thickness,sclerification and more developed metaxylem area.In conclusion,shifting of morphological features in below-and above-ground plant parts of C.serrulatus were linked to shifts in environmental factors along this elevation gradient,thus enabling the successful distribution of this species along this elevation gradient.

关键词： Adaptive component Storage parenchyma Sclerification Metaxylem aerenchyma

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Transcriptome Analysis and Morphological Changes in Response to Waterlogging in Iris pseudacorus

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Phyton-International Journal of Experimental Botany 2022年第10期91卷 2135-2162页

作者： Xiaofang Yu Linjie Yue Qing Wu Liu Yang Chunyu Fan Zhiwen Wang Jiani Hu College of Landscape Architecture Sichuan Agricultural UniversityChengdu611130China

Iris pseudacorus is a widely cultivated and studied ornamental plant with a large biomass,strong adaptability and extensive management.Moreover,it has the ability to decontaminate and enrich heavy metals.However,few studies have been conducted on its submergence tolerance with little known about the molecular response of I.pseudacorus to flooding.Morphologically,I.pseudacorus had strong adaptability to waterlogging,the aerenchyma was gradually enlarged and adventitious roots developed between 0 and 14 d.The transcriptome data showed that the differentially expressed genes counts in plants flooded for 2 h,4 h,12 h and 24 h compared with the unflooded controls were 3555,9439,10734,and 4997,respectively.For GO term entries enriched by different genes,many biological processes,cell components and molecular processes in the I.pseudacorus roots were affected by flooding stress.Pathways enrichment analysis showed DEGs involved in hormone signal transduction pathways,glucose metabolism,glycolysis,and fermentation.The quantitative real-time PCR analysis of DEGs was basically consistent with the trend of transcriptome data,indicating reliability of the transcriptome data.The transcriptome analysis showed that formation of aerenchyma and adventitious roots was mainly induced by IAA(auxin)and accompanied by other hormone signals.Energy production was the primary coping mechanism of I.pseudacorus when aerenchyma was not sufficiently enlarged under water flooding.These results laid a foundation for further study on the mechanism of submerging-tolerance of I.pseudacorus and other aquatic plants.

关键词： Iris pseudacorus waterlogging transcriptome aerenchyma energy production

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INTERACTIONS BETWEEN ABOVE AND BELOW GROUND PLANT STRUCTURES:MECHANISMS AND ECOSYSTEM SERVICES

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Frontiers of Agricultural Science and Engineering 2022年第2期9卷 197-213页

作者： John A.RAVEN Division of Plant Science University of Dundee at the James Hutton InstituteInvergowrieDundee DD25DAUK Climate Change Cluster Faculty of ScienceUniversity of Technology SydneySydneyUltimo NSW 2007Australia School of Biological Sciences University of Western AustraliaCrawley WA 6009Australia

Interactions between above and below ground parts of plants can be considered under the(overlapping) categories of energy,material and information.Solar energy powers photosynthesis and transpiration by above ground structures,and drives most water uptake through roots and supplies energy as organic matter to below ground parts,including diazotrophic symbionts and mycorrhizas.Material transfer occurs as water and dissolved soil-derived elements transport up the xylem,and a small fraction of water moving up the xylem with dissolved organic carbon and other solutes down the phloem.The cytosolic nature of sieve tubes accounts for at least some of the cycling of K,Mg and P down the phloem.NO_(3)^(–) assimilation of above ground parts requires organic N transport down phloem with,in some cases,organic anions related to shoot acid-base regulation.Long-distance information transfer is related development,biotic and abiotic damage,and above and below ground resource excess and limitation.Information transfer can involve hydraulic,electrical and chemical signaling,with their varying speeds of transmission and information content.Interaction of above and below ground plant parts is an important component of the ecosystem service of storing atmospheric CO_(2) as organic C in soil,a process that has decreased since the origin of agriculture.

关键词： aerenchyma carbon accumulation hormones phloem xylem

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Effects of flooding on arbuscular mycorrhizal colonization and root-nodule formation in different roots of soybeans

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Agricultural Sciences 2013年第12期4卷 673-677页

作者： Rintaro Hattori Atsushi Matsumura Kenji Yamawaki Arata Tarui Hiroyuki Daimon Graduate School of Life and Environmental Sciences Osaka Prefecture University Osaka Japan

In several countries in monsoon Asia, soybean crops are cultivated in upland fields converted from paddies. In such fields, excess soil water often induces extensive damage followed by lower nutrient uptake by this crop. In this study, the effects of flooding during the early growth stage of pot-grown soybeans on arbuscular mycorrhizal (AM) colonization and root nodule formation were investigated. Twenty days after sowing cv. Fukuyutaka, half of the pots were flooded (flooding) and the other half were left unflooded (irrigation). The plants were sampled after 39 days of flooding. Typical morphological alterations to flooding were found, including an enlarged hypocotyl diameter and partial cracking of the surface tissues, and adventitious roots developed on the soil surface. The primary and lateral roots were shorter and the adventitious roots were longer in flooding than in irrigation. In flooding, the ratio of the aerenchyma area to the stele area was 82.5% in adventitious roots. The AM colonization ratio in flooding was significantly lower than in irrigation. The ratio in flooding was markedly low in the primary and lateral roots, but it was not necessarily low in the adventitious roots. Root nodules were formed on the adventitious roots but not on the primary and lateral roots, especially in flooding. These results showing different rates of AM colonization and root nodule formation between the two different types of roots improve the understanding of responses of soybeans grown in paddy-rotated upland fields.

关键词： Adventitious Root aerenchyma Bradyrhizobium Root System Wet Injury

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