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Identification and Preliminary Analysis of Several Centromere-associated Bacterial Artificial Chromosome Clones from a Diploid Wheat Library

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Journal of Integrative Plant Biology 2006年第3期48卷 348-358页

作者： Zhao Liu Wei yue yu-shen dong Xue-Yong Zhang Key Laboratory of Crop Germplasm and Biotechnology Institute of Crop Sciences Chinese Academy of Agricultural Sciences Beijing 100081 China State Key Laboratory of Crop Genetics and Germplasm Enhancement Nanjing Agricultural University Nanjing 210095 China

Although the centromeres of some plants have been investlgated prevlously, our knowledge of the wheat centromere Is still very llmlted. To understand the structure and functlon of the wheat centromere, we used two centromeric repeats （RCS1 and CCS1-5ab） to obtain some centromere-assoclated bacterial artificial chromosome （BAC） clones in 32 RCS1-related BAC clones that had been screened out from a diploid wheat （Triticum boeoticum Boiss.; 2n=2x=14） BAC library. Southern hybridization results indicated that, of the 32 candidates, there were 28 RCS1-positive clones. Based on gel blot patterns, the frequency of RCS1 was approximately one copy every 69.4 kb in these 28 RCS1-positive BAC clones. More bands were detected when the same filter was probed with CCS1-5ab. Furthermore, the CCS1 bands covered all the bands detected by RCS1, which suggests that some CCS1 repeats were distributed together with RCS1. The frequency of CCS1 families was once every 35.8 kb, nearly twice that of RCS1. Fluorescence in situ hybridization （FISH） analysis Indicated that the five BAC clones containing RCS1 and CCS1 sequences all detected signals at the centromerlc regions in hexaplold wheat, but the signal intensities on the A-genome chromosomes were stronger than those on the B- and/or Dgenome chromosomes. The FISH analysis among nine Triticeae cereals indicated that there were A-genomespecific （or rich） sequences dispersing on chromosome arms in the BAC clone TbBACS. In addition, at the interphase cells, the centromeres of diploid species usually clustered at one pole and formed a ring-like allocation In the period before metaphase.

关键词： centromere fluorescence in situ hybridization (FISH) repeat Southern hybridization Triticum boeoticum.

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Expression Analysis of HMW-GS 1Bx14 and 1By15 in Wheat Varieties and Transgenic Research of 1By15 Gene

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Agricultural Sciences in China 2006年第10期5卷 725-735页

作者： XU Tao ZHANG Xue-yong dong yu-shen Key Laboratory of Crop Germplasm and Biotechnology Ministry of Agriculture/Institute of Crop Sciences Chinese Academy of AgriculturalSciences The National Facility for Crop Gene Resources and Genetic Improvement Beijing 100081 P.R.China

High-molecular-weight glutenin subunits （HMW-GSs）, one class of seed storage proteins in wheat, play an important role in determining bread-making quality of flour. More and more proves support that HMW-GS- 1Bx 14 and - 1Bx 15 subunits are strongly positively associated with good bread-making and excellent noodle-making quality. The two subunits are encoded by two genes, Glu-1Bx14 and Glu-1Bx15, which are tightly linked and located on the 1BL. Protein assay by SDS-PAGE indicated that the expression of Glu-1Bx14 gene was always much stronger than that of Glu-1By15 in the same variety. But, variation of expression level for Glu-1By15 gene existed among varieties, such as in Xiaoyan 54, Xiaoyan 6, Yanzhan 1 and Shanyou 225. We also investigated the transcription difference of Glu-1By14 and Glu-1By15 genes in Xiaoyan 54 and Shanyou 225 by semi-quantitative RT-PCR method. The Glu-1By14 always transcripts much more than the Glu-1By15. This was basically consistent with the translation difference between the two genes. Promoters of 1Bx14, 1By15, 1By8, 1Dx2 and 1Dy12 were cloned from Xiaoyan 54, Chinese Spring and Aegilops tauschii. Sequence analysis indicated that the HMW-GS genes had high homology at their promoter regions. However, significant difference existed between sequence of 1Bx14 promoter and those of other HMW-GS genes. The transient expression experiment showed that the promoter of 1By15 has lower activity than that of 1Bx14, which was consistent with their transcription level of the two genes in varieties. In addition, transient expression of the gus driven by the promoter （P2） of HMW-GS 1Dx2 gene was higher than by other HMW-GS promoters. Therefore, we constructed 1By15 gene expression vector driven by the 1Dx2 promoter, and transformed the 1By15 gene into wheat commercial variety, Jimai 20 by pollen tube method. Of 45 independent transgenic lines identified by PCR, 3 were confirmed to contain the HMW-GS 1By15 gene via Southern hybridization. The delivered 1B

关键词： HMW-GS 1By15 gene transient expression assay transgenic

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Design and efficient synthesis of novel haptens and complete antigens for the AOZ,a toxic metabolite of furazolidone

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Chinese Chemical Letters 2007年第12期18卷 1490-1492页

作者： yu dong shen yu Wang Shi Wei Zhang Zhi LiXiao yuan Ming Sun Xian Zhang Bu Lian Quan Gu Food Quality and Safety Key Laboratory of Department of Education of Guangdong Province/Institute of Food Quality and Safety South China Agricultural University Guangzhou 510642 China School of Pharmaceutical Sciences Sun Yat-Sen University Guangzhou 510080 China

A good strategy was brought forward for designing efficient haptens and complete antigens for 3-amino-2-oxazolidinone （AOZ）. Haptens designed newly were achieved facilely in good yield by using LiCI-N（Et）3 as new catalysis system, the structure of which was elucidated by spectroscopy analysis, such as NMR and MS. Novel antigens for AOZ were prepared successfully by convenient active ester method. The ratios of haptens 3 and 4 to carrier proteins were proven respectively as 41 ： 1 （5a）, 39：1 （6a）, 11：1 （5b） and 9：1 （6b） by trinitrobenzene sulfonic acid （TNBS） method. The results of indirect competitive ELISA （ic-ELISA） of antiserums indicated that the haptens with a short unsaturated side chain can evoke specific immune response effectively.

关键词： Furazolidone AOZ Antigen Hapten Immunoassay

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Unexpected Synthesis of 2,2'-[1-(4-Methoxyphenoxy)propane-2,2-diyl]bis(5-methoxy-3-methylbenzofuran)

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Chinese Chemical Letters 2005年第12期16卷 1581-1583页

作者： yu dong shen Hai Qiang WU Lin Kun AN Zhi Shu HUANG Xian Zhang BU Lian Quan GU School of Chemistry and Chemical Engineering Sun Yat-sen University Guangzhou 510275 School of Pharmaceutical Sciences Sun Yat-sen University Guangzhou 510080

A new bisbenzofuran analogue Ⅶ was achieved unexpectedly in one step procedure from 1-（4-methoxyphenoxy）acetone Ⅰ by using Amberlyst 15 resin as catalyst in excellent yield. The structure was elucidated by spectro... 详细信息

关键词： Benzofuran Amberlyst 15 resin cyclization

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Dispersion of Soluble Matters in Newton-dipolar Stratified Fluid and Effects of Peripheral Layer

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Communications in Nonlinear Science and Numerical Simulation 1998年第4期3卷 236-241页

作者： Zhangji LU, Shousheng dong, yu shen and Guangping ZHENG (Department of Mechanics and Engineering Science, Fudan University, Shanghai 200433,China)(Department of Physics, East China Normal University, Shanghai 200062, China) Dept. of Mechanics and Eng. Science Fudan University Shanghai 200433 China Department of Physics East China Normal University Shanghai 200062 China

In the paper, the dispersion law and the concentration distributions of soluble matters in Newton-dipolar fluids flowing through a circular tube have been investigated. Main results are: (1) for the dependence of M on A (or H), the completely opposite trends are obtained in the cases with and without the peripheral layer. (2) effects of δ on　M have the minimum values near 8=0.85-0.9. (3) various models such as couple stress,micropolar, dipolar, Newton-newtonian, Newton-couple stress and Newton-micropolar　model etc. are all special cases of Newton-dipolar fluid (where Mz=0). WhenMz≠ 0,however, there are evident differences between the Newton-dipolar fluid and the Newtoncouple stress fluid, the Newton-micropolar fluid.

关键词： dipolar fluid dispersion effects of a peripheral layer tube flow of complex fluid

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Hitchhiking Effect Mapping: A New Approach for Discovering Agronomic Important Genes

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Agricultural Sciences in China 2007年第3期6卷 255-264页

作者： ZHANG Xue-yong TONG Yi-ping YOU Guang-xia HAO Chen-yang GE Hong-mei WANG Lan-fen LI Bin dong yu-shen LI Zhen-sheng Institute of Crop Sciences Chinese Academy of Agricultural Sciences/Key Laboratory of Crop Germplasm ＆ Biotechnology Ministry of Agriculture/National Facility for Crop Gene Resources and Genetic Improvement Beijing 100081 P.R.China State Key Laboratory of Plant Cell and Chromosome Engineering Institute of Genetics and Developmental Biology Chinese Academy of Sciences Beijing 100101 P.R.China

Besides the natural selection, the crops cultivated today have experienced two episodes of strong artificial selection, domestic and modern breeding. Domestication led to giant genetic structure differentiation between cultivars and their wild species, while modern breeding made further genetic structure differentiation between the modern varieties and the landraces. In a population, diversity of the loci under strong selection is significantly lower than that of other loci. At the same time, diversity in the genomic regions flanking these selected loci also declines in the process of selection. This phenomenon is called hitchhiking effects or selection sweep in genetics. Genomic regions with selection sweep （haplotype block） could be detected after draft genome scanning （genome typing） with molecular markers in a number of released varieties or natural populations. Marker/trait association analysis in these regions would detect the loci （or QTLs） even the favored alleles （genes） in breeding or natural adaptation. Fine scanning of these genomic regions would help to determine the sizes of haplotype blocks and to discover the key genes, thereby providing very valuable information for isolation of the key genes and molecular design of new varieties. Establishment of high density genetic linkage maps in the major crops and availability of high throughput genotyping platform make it possible to discover agronomic important genes through marker/trait association analysis. On the basis of available publications, we give a brief introduction of the hitchhiking effect mapping approach in this paper using plant height, 1 000-grain weight, and phosphorus-deficiency tolerance as examples in wheat.

关键词： domestication & breeding hitchhiking effects marker/trait association analysis gene discovery

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水环境中溶解态腐殖酸对锌抗甲状腺激素干扰效应的影响

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环境科学 2017年第1期38卷 195-200页

作者：艾扬孔东东于畅沈扬李剑北京师范大学水科学研究院地下水污染控制与修复教育部工程研究中心北京100875

本文以重金属锌为研究对象,应用重组人甲状腺激素受体(h TR)基因酵母快速测试方法,检测溶解态腐殖酸对锌抗甲状腺激素干扰效应的影响,利用阳极溶出伏安法(ASV)检测溶解态腐殖酸与锌作用后,生物有效态锌含量的变化,同时利用三维荧光光谱... 详细信息

本文以重金属锌为研究对象,应用重组人甲状腺激素受体(h TR)基因酵母快速测试方法,检测溶解态腐殖酸对锌抗甲状腺激素干扰效应的影响,利用阳极溶出伏安法(ASV)检测溶解态腐殖酸与锌作用后,生物有效态锌含量的变化,同时利用三维荧光光谱中的激发-发射矩阵(3DEEM)技术初步考察腐殖酸与锌的作用机制.结果表明,氯化锌具有显著的抗甲状腺激素干扰效应,其RIC20(抑制率为20%时氯化锌的浓度)值为1.70×10-5mol·L^(-1),当腐殖酸与氯化锌作用后,其抗甲状腺激素干扰效应降低了30%~50%,ASV测试结果表明当腐殖酸和氯化锌溶液混合后,生物有效态锌含量明显降低,与生物测试结果相似;紫外照射腐殖酸与氯化锌的混合体系后,其抗甲状腺激素干扰效应上升,但仍低于未加腐殖酸氯化锌溶液的抗甲状腺激素干扰效应值;3DEEM的测试结果表明氯化锌能够降低腐殖酸荧光峰的荧光强度,能够直观地表征腐殖酸与氯化锌相互作用.上述结果可为研究环境水体中锌的生物毒性及锌水质基准的制定提供基础数据和理论支持.

关键词：溶解态腐殖酸锌甲状腺激素干扰效应阳极溶出伏安法三维荧光光谱

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Detection of Perfect Stealthy Attacks on Cyber-Physical Systems Subject to Measurement Quantizations: A Watermark-Based Strategy

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IEEE/CAA Journal of Automatica Sinica 2025年第1期 114-125页

作者： yu-Ang Wang Zidong Wang Lei Zou Bo shen Hongli dong the College of Information Science and Technology Donghua University the Engineering Research Center of Digitalized Textile and Fashion Technology Ministry of Education IEEE the College of Electrical Engineering and Automation Shandong University of Science and Technology the Department of Computer Science Brunel University London Uxbridge the Sanya Offshore Oil and Gas Research Institute Northeast Petroleum University the Artificial Intelligence Energy Research Institute Northeast Petroleum University Heilongjiang Provincial Key Laboratory of Networking and Intelligent Control Northeast Petroleum University

In this paper, the attack detection problem is investigated for a class of closed-loop systems subjected to unknownbutbounded noises in the presence of stealthy attacks. The measurement outputs from the sensors are quantized before transmission.A specific type of perfect stealthy attack, which meets certain rather stringent conditions, is taken into account. Such attacks could be injected by adversaries into both the sensor-toestimator and controller-to-actuator channels, with the aim of disrupting the normal data flow. For the purpose of defending against these perfect stealthy attacks, a novel scheme based on watermarks is developed. This scheme includes the injection of watermarks(applied to data prior to quantization) and the recovery of data(implemented before the data reaches the estimator).The watermark-based scheme is designed to be both timevarying and hidden from adversaries through incorporating a time-varying and bounded watermark signal. Subsequently, a watermark-based attack detection strategy is proposed which thoroughly considers the characteristics of perfect stealthy attacks,thereby ensuring that an alarm is activated upon the occurrence of such attacks. An example is provided to demonstrate the efficacy of the proposed mechanism for detecting attacks.

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CNKSR2 interactome analysis indicates its association with the centrosome/microtubule system

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Neural Regeneration Research 2025年第8期20卷 2420-2432页

作者： Lin Yin Yalan Xu Jie Mu yu Leng Lei Ma yu Zheng Ruizhi Li Yin Wang Peifeng Li Hai Zhu dong Wang Jing Li Institute for Translational Medicine The Affiliated Hospital of Qingdao UniversityMedical CollegeQingdao UniversityQingdaoShandong ProvinceChina School of Basic Medicine Qingdao UniversityQingdaoShandong ProvinceChina College of Life Sciences and School of PharmacyMedical CollegeQingdao UniversityQingdaoShandong ProvinceChina Department of Urology Qingdao Municipal Hospital Affiliated to Qingdao UniversityQingdaoShandong ProvinceChina

The protein connector enhancer of kinase suppressor of Ras 2(CNKSR2),present in both the postsynaptic density and cytoplasm of neurons,is a scaffolding protein with several protein-binding *** of the CNKSR2 gene have been implicated in neurodevelopmental disorders,particularly intellectual disability,although the precise mechanism involved has not yet been fully *** has demonstrated that CNKSR2 plays a role in facilitating the localization of postsynaptic density protein complexes to the membrane,thereby influencing synaptic signaling and the morphogenesis of dendritic ***,the function of CNKSR2 in the cytoplasm remains to be *** this study,we used immunoprecipitation and high-resolution liquid chromatography-mass spectrometry to identify the interactors of *** a combination of bioinformatic analysis and cytological experiments,we found that the CNKSR2 interactors were significantly enriched in the proteome of the *** also showed that CNKSR2 interacted with the microtubule protein DYNC1H1 and with the centrosome marker *** colocalization analysis confirmed the centrosomal localization of *** we downregulated CNKSR2 expression in mouse neuroblastoma cells(Neuro 2A),we observed significant changes in the expression of numerous centrosomal *** manipulation also affected centrosome-related functions,including cell size and shape,cell proliferation,and ***,we found that CNKSR2 interactors were highly enriched in de novo variants associated with intellectual disability and autism spectrum *** findings establish a connection between CNKSR2 and the centrosome,and offer new insights into the underlying mechanisms of neurodevelopmental disorders.

关键词： autism spectrum disorder centrosome CNKSR2 intellectual disability interactome mass spectrometry microtubule neurodevelopmental disease protein complexes protein-protein interactions

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Enteromorpha prolifera polysaccharide-Fe(Ⅲ) complex promotes intestinal development as a new iron supplement

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Science China Life Sciences 2025年第1期 219-231页

作者： Yingying Feng yuying Wu Jialu Wang Zhenglin dong Qian yu Shuangshuang Xia Chunxue Liu Haihua Wang Xin Wu Tianjin Institute of Industrial Biotechnology Chinese Academy of Sciences CAS Key Laboratory of Agro-ecological Processes in Subtropical Region Institute of Subtropical AgricultureChinese Academy of Sciences ANYOU Biotechnology Group Co.Ltd Qingdao Seawin Biotech Group Co. LTD

Iron is a crucial micronutrient, and its deficiency can have detrimental effects on the health of infants. Dietary polysaccharide-iron(Ⅲ) complexes(PICs) are promising for addressing iron deficiency due to their minimal adverse reactions and high iron absorption rate. This study aimed to investigate the effects of dietary Enteromorpha prolifera polysaccharide-Fe(Ⅲ) complex(EP-Fe) on newborns, using 3-day weaned piglets as the iron-deficiency model. Results showed that EP-Fe improved iron levels and promoted intestinal development in piglets. Transcriptome sequencing revealed that EP-Fe increased the survival of intestinal epithelial cells under hypoxia by upregulating the expression of genes that promote the development of the vascular system. Additionally, EP-Fe enhanced the mucosal barrier functions by inhibiting myosin light chain kinase(MLCK)/phosphorylated myosin light chain(p-MLC) signaling pathway to increase the expression of intestinal tight junction proteins. Furthermore, the 16S r RNA gene sequencing of gut microbiota showed that EP-Fe promoted the enrichment of Bacteroides＿fragilis and other gut microbes that can metabolize carbohydrates. In conclusion, EP-Fe is an effective iron supplement for newborns, and it can be developed as a comprehensive nutritional supplement.

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