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Single-cell and spatial omics:exploring hypothalamic heterogeneity

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Neural Regeneration Research 2025年第6期20卷 1525-1540页

作者： Muhammad Junaid Eun Jeong Lee Su Bin lim Department of Biochemistry&Molecular Biology Ajou University School of MedicineSuwonSouth Korea Department of Biomedical Sciences Graduate School of Ajou UniversitySuwonSouth Korea Department of Brain Science Ajou University School of MedicineSuwonSouth Korea

Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technologies have significantly evolved, overcoming initial technical challenges in capturing and analyzing individual cells. These high-throughput omics technologies now offer a remarkable opportunity to comprehend the complex spatiotemporal patterns of transcriptional diversity and cell-type characteristics across the entire hypothalamus. Current single-cell and single-nucleus RNA sequencing methods comprehensively quantify gene expression by exploring distinct phenotypes across various subregions of the hypothalamus. However, single-cell/single-nucleus RNA sequencing requires isolating the cell/nuclei from the tissue, potentially resulting in the loss of spatial information concerning neuronal networks. Spatial transcriptomics methods, by bypassing the cell dissociation, can elucidate the intricate spatial organization of neural networks through their imaging and sequencing technologies. In this review, we highlight the applicative value of single-cell and spatial transcriptomics in exploring the complex molecular-genetic diversity of hypothalamic cell types, driven by recent high-throughput achievements.

关键词： cellular diversity hypothalamus multi-omics single-cell transcriptomics spatial transcriptomics

Improvement of light uniformity by lighting arrangement for standardized crop production

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Journal of Central South University 2014年第11期21卷 4311-4319页

作者： Lee hwa-Soo Kwon Sook-Youn lim Jae-Hyun Department of Computer Science and Engineering Kongju National UniversityCheonan 331-717 Korea

In a commercialized, fully artificial plant factory, artificial luminaire is arranged in a unified way using a general illumination theory, an actual measurement, or an empirical methodology. However, with these methods, lightings are implemented without considering specific optical characteristics of lighting or material characteristics of each component that constructs a cultivation system, resulting in an amount of light that becomes irregular. The amount of lighting is closely related with the growth and quality of crops, and the deviation between points where cultivated crops are located causes quality difference in the produced crops, thus impairing the economic feasibility of a plant factory. In this regard, a simulation to figure out an optimum lighting layout was performed. Arrangements based on the spectrum distribution of light source and reflector materials were implemented to ascertain the distance between lighting and height of lighting and gather information in the pre-treatment process to improve the uniformity of light in the plant cultivation system. Improvement of around 15% in light uniformity is achieved compared with the existing system after the simulation is carried out. This result would reduce the deviation in crop growth to make uniform quality crop production possible.

关键词： high-quality crop light uniformity improvement optimal lighting layout fully artificial plant factory Relux simulation

A review of understanding electrocatalytic reactions in energy conversion and energy storage systems via scanning electrochemical microscopy

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Journal of Energy Chemistry 2024年第4期91卷 155-177页

作者： Jihye Park Jong hwan lim Jin-Hyuk Kang Jiheon lim Ho Won Jang Hosun Shin Sun hwa Park Interdisciplinary Materials Measurement Institute Korea Research Institute of Standards and ScienceDaejeon 34113Republic of Korea Department of Material Science and Engineering Seoul National UniversitySeoul 08826Republic of Korea Department of Applied Measurement Science University of Science and TechnologyDaejeon 34113Republic of Korea

To address climate change and promote environmental sustainability,electrochemical energy conversion and storage systems emerge as promising alternative to fossil fuels,catering to the escalating demand for *** optimal energy efficiency and cost competitiveness in these systems requires the strategic design of electrocatalysts,coupled with a thorough comprehension of the underlying mechanisms and degradation behavior occurring during the electrocatalysis *** electrochemical microscopy(SECM),an analytical technique for studying surface electrochemically,stands out as a powerful tool offering electrochemical *** possesses remarkable spatiotemporal resolution,enabling the visualization of the localized electrochemical activity and surface *** review compiles crucial research findings and recent breakthroughs in electrocatalytic processes utilizing the SECM methodology,specifically focusing on applications in electrolysis,fuel cells,and metal–oxygen batteries within the realm of energy conversion and storage *** with an overview of each energy system,the review introduces the fundamental principles of SECM,and aiming to provide new perspectives and broadening the scope of applied research by describing the major research categories within SECM.

关键词： Scanning electrochemical microscopy Electrocatalyst Electrocatalysis Water splitting Fuel cell Metal-oxygen battery

A taxonomic review of the genus Miaenia Pascoe, 1864(Coleoptera: Cerambycidae) from South Korea with a new record of M. tonsa(Bates)

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Journal of Forestry Research 2018年第3期29卷 822-829页

作者： Ik Je Choi Tae sung Kwon Jongok lim Silkworm and Insect Management Center Gyeongsangbuk-do Agricultural Resource Management Institute Forest Insect Pests and Disease Division Korea Forest Research Institute Division of Forest Biodiversity Korea National Arboretum

The cerambycid genus Miaenia Pascoe(Coleoptera: Cerambycoidea) of South Korea is taxonomically reviewed. Two species, Miaenia fasciata fasciata(Matsushita) and Miaenia maritima Tsherepanov have been recorded. In this paper, M. tonsa(Bates) is added to the Korean cerambycid fauna for the first time. A key to Korean Miaenia species, re-description and diagnostic illustrations, including male genitalia for each species, are provided.

关键词： Acanthocinini Cerambycidae Miaenia New species South Korea Taxonomy

Capacitive Control of Spontaneously Induced Electrical Charge of Droplet by Electric Field-Assisted Pipetting

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Nano-Micro Letters 2015年第4期7卷 341-346页

作者： Horim Lee Dongwhi Choi Dong sung Kim Geunbae lim Department of Mechanical Engineering Pohang University of Science and Technology (POSTECH) Analysis Science & Engineering Team Semiconductor R&D Center Samsung Electronics Co. Ltd.

The spontaneously generated electrical charge of a droplet dispensed from conventional pipetting is undesirable and unpredictable for most experiments that use ***,a method for controlling and removing the electrical charge needs to be *** this study,by using the electrode-deposited pipet tip(E-pipet tip),the charge-controlling system is newly developed and the electrical charge of a droplet is precisely *** effect of electrolyte concentration and volume of the transferred solution to the electrical charge of a dispensed droplet is theoretically and experimentally investigated by using the equivalent capacitor ***,a proof-of-concept example of the self-alignment and self-assembly of sequentially dispensed multiple droplets is demonstrated as one of the potential *** that the electrical charge of the various aqueous droplets can be precisely and simply controlled,the fabricated E-pipet tip can be broadly utilized not only as a general charge-controlling platform of aqueous droplets but also as a powerful tool to explore fundamental scientific research regarding electrical charge of a droplet,such as the surface oscillation and evaporation of charged droplets.

关键词： Pipet tip Capacitive control Electrical charge Self-assembly

Compensation of image noise induced by difference in optical characteristics of array-LED chips of LED print head

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Science China(Technological Sciences) 2017年第12期60卷 1819-1830页

作者： KIM Wan-Chin PARK Yong-Shik KIM sung-Dae lim Jiseok Department of Automotive Engineering Honam University Gwansan-gu Gwangju 62399 Korea Mangoslab Co. Ltd. Startupeampus 20 Pangyo-ro 289beon-gil Bundang-gu Seongnam-si Gyeonggi-do 13488 Korea S-Printing Solution Co. Ltd. (Samsung Electronics Ltd) Suwon Gyeonggi-do 443-742 Korea School of Mechanical Engineering Yeungnam University Gyeongsan Gyeongbuk 38541 Korea

There are various applied electro-optical devices, which utilize light emitting didoe(LED) chip array for applications to displays and opto-electronic sensors. In those devices, it is the one of the critical technical issues to minimize uncertain fluctuations including optical power and optical density. Due to variation in operating environment of a device, those are not corrected precisely by controlling parameters based on simple relation between parameters and resultant abovementioned ***, there is essential need to correct outputs in real-time based on correction function generated from the consideration on various operation condition. In this article, we introduce an output correction method through reporting real-time image noise reduction in the application to electro-photography with LED print head. In the technology of LED print head, as differences in optical characteristics between each LED cause vertical image noise, it should be corrected in order to obtain images that are comparable or better in quality compared to those produced by the conventional laser scanning method. Even though it seems that the method used to obtain uniform light power from each LED can solve this problem, it does not work well for high-resolution printing. Therefore, a scan method involving correction by a printed and scanned pattern is introduced through this work. The scan method is composed of correction patterns to minimize printing noise by its shape, the correction algorithm to calculate the optimized value and the printing algorithm to control gray levels in real-time precisely. We believe that the developed correction method upgrades the printing quality of the LPH printer better than commercial printers. The developed correction method can also be applied to various application areas that use an array-type light source such as display systems and lighting systems.

关键词： real-time image correction LED print head(LPH) vertical image noise electro-photography temporal correction spatial correction

Application of Integrated Database to the Casting Design

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Journal of Materials Science & Technology 2008年第3期24卷 351-355页

作者： In-sung Cho Seung-Mok Yoo Chae-Ho lim Jeong-Kil Choi KITECH 7-47 Songdo-dongYeonsu-gu

Construction of integrated database including casting shapes with their casting design, technical knowledge, and thermophysical properties of the casting alloys were introduced in the present study. Recognition tech- nique for casting design by industrial computer tomography was used for the construction of shape database. Technical knowledge of the casting processes such as ferrous and non-ferrous alloys and their manufacturing process of the castings were accumulated and the search engine for the knowledge was developed. Database of thermophysical properties of the casting alloys were obtained via the experimental study, and the properties were used for the in-house computer simulation of casting process. The databases were linked with intelligent casting expert system developed in center for e-design, KITECH. It is expected that the databases can help non casting experts to devise the casting and its process. Various examples of the application by using the databases were shown in the present study.

关键词： Integrated database Casting design Shape recognition

Controlled mutual quantum entity authentication using entanglement swapping

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Chinese Physics B 2015年第9期24卷 116-124页

作者： Min-sung Kang Chang-Ho Hong Jino Heo Jong-In lim Hyung-Jin Yang Center for Information Security Technologies (CIST) Korea University Graduate School of Information Security Korea University Department of Physics Korea University

In this paper, we suggest a controlled mutual quantum entity authentication protocol by which two users mutually certify each other on a quantum network using a sequence of Greenberger–Horne–Zeilinger（GHZ）-like states. Unlike existing unidirectional quantum entity authentication, our protocol enables mutual quantum entity authentication utilizing entanglement swapping; moreover, it allows the managing trusted center（TC） or trusted third party（TTP） to effectively control the certification of two users using the nature of the GHZ-like state. We will also analyze the security of the protocol and quantum channel.

关键词： quantum authentication quantum cryptography quantum communication GHZ-like state

ABA Signaling in Guard Cells Entails a Dynamic Protein-Protein Interaction Relay from the PYL-RCAR Family Receptors to Ion Channels

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Molecular Plant 2013年第2期6卷 528-538页

作者： sung Chul Lee Chae Woo lim Wenzhi Lan Kai He Sheng Luan Department of Plant and Microbial Biology University of California Berkeley CA 94720 USA School of Biological Sciences (BK21 Program) Chung-Ang University Seoul 156-756 Korea Plant Molecular Biology Institute and College of Life Sciences Nanjing University China WCU Program Chonnam National University Gwangju Korea

Plant hormone abscisic acid （ABA） serves as an integrator of environmental stresses such as drought to trig-ger stomatal closure by regulating specific ion channels in guard cells. We previously reported that SLAC1, an outward anion channel required for stomatal closure, was regulated via reversible protein phosphorylation events involving ABA signaling components, including protein phosphatase 2C members and a SnRK2-type kinase （OST1）. In this study, we reconstituted the ABA signaling pathway as a protein-protein interaction relay from the PYL/RCAR-type receptors, to the PP2C-SnRK2 phosphatase-kinase pairs, to the ion channel SLAC1. The ABA receptors interacted with and inhibited PP2C phosphatase activity against the SnRK2-type kinase, releasing active SnRK2 kinase to phosphorylate, and activate the SLAC1 channel, leading to reduced guard cell turgor and stomatal closure. Both yeast two-hybrid and bimolecular fluorescence complementation assays were used to verify the interactions among the components in the pathway. These biochemical assays demonstrated activity modifications of phosphatases and kinases by their interaction partners. The SLAC1 channel activity was used as an endpoint readout for the strength of the signaling pathway, depending on the presence of different combinations of signaling components. Further study using transgenic plants overexpressing one of the ABA receptors demonstrated that changing the relative level of interacting partners would change ABA sensitivity.

关键词： abscisic acid ABA receptor protein kinase protein phosphatase SLAC1.