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Tubeufiales,***.,integrating sexual and asexual generic names

Fungal Diversity 2014年第5期68卷 239-298页

作者： saranyaphat b.onmee Amy Y.Rossman Jian-Kui Liu Wen-Jing Li Don-Qing Dai Jayarama D.bhat E.b.Gareth Jones Eric H.C.McKenzie Jian-Chu Xu Kevin D.Hyde Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina World Agro forestry Centre East and Central Asia Office 132 Lanhei RoadKunming 650201China Institute of Excellence in Fungal Research Mae Fah Luang UniversityMuangChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityMuangChiang Rai 57100Thailand Systematic Mycology and Microbiology Laboratory USDA-ARSBeltsvilleMD 20705USA Formerly at Department of botany Goa UniversityGoa 403206India Department of botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Landcare Research AucklandNew Zealand

Tubeufiaceae is based on the generic type Tubeufia,which is characterized by superficial,oval and bright ascomata,bitunicate asci,mostly long fusiform to filiform,transeptate ascospores and hyphomycetous asexual states with helicosporous *** species in this family are saprobic on terrestrial woody substrates and some are *** distinct morphology as well as combined LSU,SSU and TEF1 sequence analysis show that Tubeufiaceae should be accommodated in a new order Tubeufiales,which is introduced in this *** analyses of combined LSU and ITS sequences were used to resolve genera and species within the family *** this study,we examine and incorporate sexual and asexual states of genera in Tubeufiales to provide a modern treatment,based on single *** epitype for Tubeufia javanica,the type species of Tubeufia,is designated and represents Tubeufia sensu *** genera Acanthophiobolus,Acanthostigma,boerlagiomyces,Chlamydotubeufia,Kamalomyces,Podonectria,Thaxteriella and Thaxteriellopsis are accepted,Acanthostigmina is reinstated,and the asexual genera Aquaphila,Helicoma,Helicomyces,Helicosporium and Tamhinispora are accepted in *** new genera Acanthohelicospora,Helicangiospora and Neoacanthostigma are *** genus bifrontia is added to the family based on morphological *** incongruous morphological genera Acanthostigmella,Amphinectria,Chaetocrea,Chaetosphaerulina,Glaxoa,Malacaria,Melioliphila,Paranectriella,Puttemansia,Rebentischia and Uredinophila are excluded from Tubeufiaceae despite having characteristic ascomata with setae and multiseptate long spores.A key to genera accepted in Tubeufiaceae is provided.

关键词： Dothideomycetes Helicospores New genus Phylogeny Taxonomy Tubeufiaceae

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Towards a natural classification and backbone tree for Pleosporaceae

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Fungal Diversity 2015年第2期71卷 85-139页

作者： Hiran A.Ariyawansa Kasun M.Thambugala Dimuthu S.Manamgoda Ruvishika Jayawardena Erio Camporesi saranyaphat b.onmee Dhanushka N.Wanasinghe R.Phookamsak Singang Hongsanan Chonticha Singtripop Ekachai Chukeatirote Ji-Chuan Kang E.b.Gareth Jones Kevin D.Hyde Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201People’s Republic of China World Agroforestry Centre East Asia and CentralHeilongtanKunming 650201People’s Republic of China The Engineering and Research Center for Southwest bio-Pharmaceutical Resources of National Education Ministry of China Guizhou UniversityGuiyang 550025Guizhou ProvinceChina School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand A.M.b.Gruppo Micologico Forlivese"Antonio Cicognani" Via Roma 18ForlìItaly Department of botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia

The family Pleosporaceae includes numerous saprobic,opportunistic human,and plant pathogenic *** classification of genera and species Pleosporaceae has been a major challenge due to the lack of a clear understanding of the importance of the morphological characters used to distinguish taxa as well as the lack of reference *** treatments concluded that Pleospora and some other genera in Pleosporaceae are likely *** order to establish the evolutionary relationships and to resolve the polyphyletic nature of Pleospora and allied genera,we sequenced the 18S nrDNA,28S nrDNA,ITS,GAPDH,RPb2 and TEF1-alpha gene regions of Pleosporaceae species and phylogenetically analysed this *** phylogenies strongly support the monophyletic nature of Pleosporaceae among the other families in Pleosporales,and the acceptance of the genera Alternaria,bipolaris,Clathrospora,Comoclathris,Curvularia,Dactuliophora,Decorospora,Diademosa,Exserohilum,Extrawettsteinina,Gibbago,Neocamarosporium,Paradendryphiella,Platysporoides,Pleospora,Porocercospora,Pseudoyuconia and ***,Dendryphion,Edenia and Macrospora are excluded from the family based on morphology coupled with molecular *** novel species,Alternaria murispora in this paper and Comoclathris sedi are *** sexual morph of Alternaria alternata is re-described and illustrated using modern concepts from fresh *** paraphyletic nature of Pleospora is resolved based on the available morpho-molecular data,but further sampling with fresh collections,reference or ex-type strains and molecular data are needed to obtain a natural classification of genera and the family.

关键词： backbone tree Dothideomycetes Pleosporales Plant pathogens Saprobes

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Dictyosporiaceae ***.

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Fungal Diversity 2016年第5期80卷 457-482页

作者： saranyaphat b.onmee Melvina J.D’souza Zonglong Luo Umpava Pinruan Kazuaki Tanaka Hongyan Su Darbhe J.bhat Eric H.C.McKenzie E.b.Gareth Jones Joanne E.Taylor Alan J.L.Phillips Kazuyuki Hirayama Prapassorn D.Eungwanichayapant Kevin D.Hyde Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand College of Agriculture and biology Sciences Dali UniversityDaliYunnan 671003China National Center for Genetic Engineering and biotechnology National Science and Technology Development AgencyThailand Science Park113 Phahonyothin RoadKlong 1Klong Luang Pathumthani 12120Thailand Formerly Department of BotanyGoa UniversityNo.128/1-JAzad Housing SocietyCurca Goa VelhaIndia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Faculty of Sciences Biosystems and Integrative Sciences Institute(BioISI)University of LisbonCampo Grande1749-016 LisbonPortugal Royal botanic Garden Edinburgh 20A Inverleith RowEdinburgh EH35LRUK Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Faculty of Agriculture and Life Science Hirosaki University3 Bunkyo-choHirosakiAomori 036-8561Japan Apple Experiment Station Aomori Prefectural Agriculture and Forestry Research Center24 FukutamiBotandairaKuroishiAomori 036-0332Japan

Dictyosporiaceae *** introduced to accommodate a holomorphic group of Dothideomycetes that are saprobes on decaying wood and plant debris in terrestrial and freshwater *** sexual morph comprises Dictyosporium meiosporum,***,Gregarithecium curvisporum,Pseudocoleophoma calamagrostidis and *** sexual morphs are characterized by immersed to erumpent,superficial,globose to subglobose,dark brown to black ascomata,bitunicate asci,and septate,hyaline,sheathed *** asexual morphs are hyphomycetous with brown,multi-septate,cheirosporous conidia,produced from holoblastic conidiogenous cells,on micronematous *** analyses of LSU,SSU and TEF1 sequence data place the genera with cheirospores in a monophyletic clade in the order *** analyses based on ITS sequence data show the family to comprise 44 distinct lineages that correspond to ten genera and an undetermined *** new genera Dictyocheirospora,Dictyopalmispora,Jalapriya and Vikalpa,and eight new species Dictyocheirospora bannica,***,***,Dictyopalmispora palmae,Dictyosporium olivaceosporum,***,Jalapriya pulchra,and Vikalpa lignicola,are introduced in the family.

关键词： Cheirosporous conidia KeylPhylogeny Sexual states Sporodochial fungi

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Dothideales

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Fungal Diversity 2014年第5期68卷 105-158页

作者： Kasun M.Thambugala Hiran A.Ariyawansa Yan-Mei Li saranyaphat b.onmee Sinang Hongsanan Qing Tian Chonticha Singtripop D.Jayarama bhat Erio Camporesi Ruvishika Jayawardena Zuo-Yi Liu Jian-Chu Xu Ekachai Chukeatirote Kevin D.Hyde Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of Botany Chinese Academy of ScienceKunming 650201YunnanChina World Agroforestry Centre East and Central AsiaKunming 650201YunnanChina Institute of Excellence in Fungal Research Chiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China International Fungal Research and Development Centre Key Laboratory of Resource Insect Cultivation&Utilization State Forestry AdministrationThe Research Institute of Resource InsectsChinese Academy of ForestryKunming 650224People’s Republic of China Department of botany Goa UniversityGoa 403206India A.M.b.Gruppo Micologico Forlivese“Antonio Cicognani” Via Roma 18ForlìItaly A.M.b.Circolo Micologico“Giovanni Carini” C.P.314BresciaItaly Societàper gli Studi Naturalistici della Romagna C.P.144BagnacavalloRAItaly

The type specimens or representative specimens of the potentially dothidealean genera bagnisiella,botryochora,Coccostromella,Columnosphaeria,Delphinel la,Dictyodothis,Discosphaerina,Dothidea,Dothiora,Endodothiora,Jaffuela,Mycoporis,Omphalospora,Pachysacca,Plowrightia,Saccothecium,Stylodothis,Sydowia and Yoshinagaia were examined while,fresh specimens of Aureobasidium pullulans,Dothidea insculpta,Plowrightia ribesia and Saccothecium sepincola were made from Italy and *** introduction and the history of these genera,their family placement,morphology,and molecular phylogeny are *** plus Genbank data are used to provide a systematic treatment of *** analysis of LSU,SSU and ITS gene regions was carried out and in the resulting phylogenetic tree the taxa cluster in two clades with high bootstrap *** A comprises Dothideaceae,the family type of *** family Dothioraceae is not recognized as a distinct family and is synonymized under *** is introduced to accommodate Cylindroseptoria pistaciae as it forms a well-supported distinct clade in *** b comprises Aureobasidium,Kabatiella,Pseudoseptoria,Saccothecium and Selenophoma species and Columnosphaeria fagi,for which we propose a new family,*** recently introduced Sydowia eucalypti also clustered within Clade b and therefore based on morphology and molecular phylogeny a new genus Pseudosydowia is introduced for Sydowia *** laricicola is separated in a distinct clade,and therefore it is placed in Dothideales,genera,incertae *** genera bagnisiella,botryochora,Coccostromella,Jaffuela,Lucidascocarpa,Mycoporis,Omphalospora,Pachysacca and Yoshinagaia are excluded from Dothideales and their placements are discussed.

关键词： Ascomycota Aureobasidiaceae Dothideaceae Dothideomycetes Dothioraceae Molecular phylogeny morphology taxonomy

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Towards a natural classification of botryosphaeriales

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Fungal Diversity 2012年第6期57卷 155-216页

作者： Jian-Kui Liu Rungtiwa Phookamsak Mingkhuan Doilom Saowanee Wikee Yan-Mei Li Hiran Ariyawansha saranyaphat b.onmee Putarak Chomnunti Dong-Qin Dai Jayarama D.bhat Andrea I.Romero Wen-Ying Zhuang Jutamart Monkai E.b.Gareth Jones Ekachai Chukeatirote Thida Win Ko Ko Yong-Chang Zhao Yong Wang Kevin D.Hyde Institute of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand The Research Institute of Resource Insects Chinese Academy of ForestryKunming 650034China Formerly at Department of botany Goa UniversityGoa 403206India Prhideb-Conicet Deptomento Cs.BiológicasFacultad de Cs.Exactas y Naturales(UBA)Ciudad UniversitariaPabellón II4to Piso1428 Buenos AiresArgentina State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101China Institute of Ocean and Earth Sciences(IOES) C308Institute of Postgraduate Studies BuildingUniversity of MalayaKuala Lumpur 50603Malaysia Macrofungi Research Lab Institute of Biotechnology&Germplasmic ResourceYunnan Academy of Agricultural ScienceKunming 650034China Department of Plant Pathology Agriculture CollegeGuizhou UniversityGuiyang 550025China

The type specimens of Auerswaldia,Auerswaldiella,barriopsis,botryosphaeria,Leptoguignardia,Melanops,Neodeightonia,Phaeobotryon,Phaeobotryosphaeria,Phyllachorella,Pyrenostigme,Saccharata,Sivanesania,Spencermartinsia and Vestergrenia were examined and fresh specimens of botryosphaeriales were collected from *** material is used to provide a systematic treatment of botryosphaeriales based on morphology and *** new genera,botryobambusa and Cophinforma are introduced and comparedwith existing *** species newto science,Auerswaldia dothiorella,***,botryosphaeria fusispora and Phaeobotryosphaeria eucalypti,are also described and *** accept 29 genera in botryosphaeriales,with Macrovalsaria being newly *** the phylogenetic tree,the 114 strains of botyrosphaeriales included in the analysis cluster into two major clades with 80%,96%and 1.00(MP,ML and bY)support,with Clade A containing the family type of botryosphaeriaceae,and Clade b containing Phyllosticta,Saccharata and Melanops *** group may represent *** Clade A the taxa analyzed cluster in eight sub-clades(Clades A1-8).Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia(Diplodia Clade),Neodeightonia(Neodeightonia Clade)and Lasiodiplodia(Lasiodiplodia Clade).Clade A2 clusters into three groups representing Phaeobotryosphaeria(100%),Phaeobotryon(100%)and barriopsis(94%).Clade A3 incorporates 17 strains that cluster into three well-supported genera(Dothiorella(86%),Spencermartinsia(100%)and Auerswaldia(63%);the position of Macrophomina is not *** A4 is a single lineage(100%)representing the new genus *** A5 is a wellsupported subclade incorporating *** A6 represents the type species of botryosphaeria,three other botryosphaeria species and two other genera,Neoscytalidium and Cophinforma *** A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella speci

关键词： Asexual morphs botryosphaeria botryosphaeriaceae Classification Diplodia Generic types Lasiodiplodia Multi-gene phylogeny New genera Phyllosticta

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Towards a natural classification and backbone tree for Lophiostomataceae,Floricolaceae,and Amorosiaceae ***.

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Fungal Diversity 2015年第5期74卷 199-266页

作者： Kasun M.Thambugala Kevin D.Hyde Kazuaki Tanaka Qing Tian Dhanushka N.Wanasinghe Hiran A.Ariyawansa Subashini C.Jayasiri saranyaphat b.onmee Erio Camporesi Akira Hashimoto Kazuyuki Hirayama RenéK.Schumacher Itthayakorn Promputtha Zuo-Yi Liu Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China Center of Excellence in Fungal Research Chiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina Faculty of Agriculture and Life Sciences Hirosaki University3 Bunkyo-cho HirosakiAomori 036-8561Japan The United Graduate School of Agricultural Sciences Iwate University18-8 Ueda 3 chomeMorioka 020-8550Japan Apple Experiment Station Aomori Prefectural Agriculture and Forestry Research Center24 FukutamiBotandairaKuroishiAomori 036-0332Japan Department of biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand A.M.b.Gruppo Micologico Forlivese bAntonio Cicognani Via Roma 18ForlìItaly A.M.b.Circolo Micologico bGiovanni Carini C.P.314 BresciaItaly Hölderlinsraße 25 15517 Fürstenwalde/SpreeGermany

The genera Lophiostoma,Misturatosphaeria and several other allied taxa in Lophiostomataceae are *** of these taxa,including their history,morphology,and family placement,based on molecular phylogeny,are *** or representative specimens of Lophiostoma and Misturatosphaeria were examined and fresh specimens were obtained from Germany,Italy,Japan and Thailand.A multi-gene phylogenetic analysis of the lophiostomataceous genera Floricola,Lophiostoma,Misturatosphaeria and related taxa is *** genera including Lophiostoma,Lophiohelichrysum,Dimorphiopsis,Platystomum and Vaginatispora,plus eleven newly introduced genera biappendiculispora,Alpestrisphaeria,Capulatispora,Coelodictyosporium,Guttulispora,Lophiopoacea,Neotrematosphaeria,Paucispora,Pseudolophiostoma,Pseudoplatystomum and Sigarispora are accepted in Lophiostomataceae based on morphology and *** caulium,Lophiostoma arundinis and Lophiostoma caudatum are accommodated in *** winteri and Lophiostoma fuckelii are placed in the genera Lophiopoacea and Vaginatispora *** Curreya species and Misturatosphaeria claviformis are transferred to a new genus,*** other Misturatosphaeria species except Misturatosphaeria aurantiinotata and *** are separated in the new genera Asymmetrispora,Aurantiascoma,Magnibotryascoma,Pseudoaurantiascoma and Pseudomisturatosphaeria based on their morphological and phylogenetic *** new genus,Ramusculicola is introduced for a new collection from *** seven new genera are accommodated in a new family Floricolaceae,together with Floricola and *** massarina-like species clustered as a sister clade to Amorosia littoralis and are accommodated in a new genus Angustimassarina.A new family Amorosiaceae is proposed to accommodate the genera Amorosia and *** putatively named species Decaisnella formosa and Thyridaria macrostomoides form a s

关键词： Dothideomycetes Floricola Lophiostoma Misturatosphaeria Multi-gene phylogeny new species new genus Pleosporales taxonomy

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Phylogenetic relationships and morphological reappraisal of Melanommataceae(Pleosporales)

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Fungal Diversity 2015年第5期74卷 267-324页

作者： Qing Tian Jian Kui Liu Kevin D.Hyde Dhanushka N.Wanasinghe saranyaphat b.onmee Subashini C.Jayasiri Zong Long Luo Joanne E.Taylor Alan J.L.Phillips Darbhe J.bhat Wen Jing Li Hiran Ariyawansa Kasun M.Thambugala EbGareth Jones Putarak Chomnunti Ali H.bahkali Jian Chu Xu Erio Camporesi Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Center for Mountain Ecosystem Studies Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Royal botanic Garden Edinburgh 20A Inverleith RowEdinburgh EH35LRUK UCIbIO Faculdade de Ciências e TecnologiaUniversidade Nova de Lisboa2829-516 CaparicaPortugal Formerly Department of BotanyGoa UniversityGoa-403206India Res:No.128/1–J Azad Housing SocietyCurcaP.O.Goa Velha-403108India Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia A.M.b.Gruppo Micologico Forlivese bAntonio Cicognani Via Roma 18ForlìItaly A.M.b.Circolo Micologico bGiovanni Carini C.P.314 BresciaItaly Societàper gli Studi Naturalistici della Romagna C.P.144 BagnacavalloRAItaly

The family Melanommataceae is widespread in temperate and subtropical regions and species invariably occur on twigs or bark of various woody plants in terrestrial,marine or freshwater *** this paper,the type species of 26 genera of the family are re-described and illustrated.A multi-gene phylogeny based on maximum likelihood and bayesian analyses of LSU,SSU,RPb2 and EF-1αsequence data of species of Melanommataceae is *** new genera,Muriformistrickeria,Pseudostrickeria and Thysanolaenae are *** is synonymized under ***,Astrosphaeriella,beverwykella,Caryosporella,Sporidesmiella and Pseudotrichia are excluded from Melanommataceae based on molecular phylogenetic ***,20 genera are accepted in *** on the phylogenetic data,five new species,byssosphaeria siamensis,Herpotrichia vaginatispora,Pseudostrickeria muriformis,Pseudostrickeria ononidis and Muriformistrickeria rubi,are introduced.

关键词： byssosphaeria Herpotrichia Multi-gene Phylogeny Muriformistrickeria New species Pseudostrickeria Taxonomy Thysanolaenae Type

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Families of Sordariomycetes

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Fungal Diversity 2016年第4期79卷 1-317页

作者： Sajeewa S.N.Maharachchikumbura Kevin D.Hyde E.b.Gareth Jones E.H.C.McKenzie Jayarama D.bhat Monika C.Dayarathne Shi-Ke Huang Chada Norphanphoun Indunil C.Senanayake Rekhani H.Perera Qiu-Ju Shang Yuanpin Xiao Melvina J.D’souza Sinang Hongsanan Ruvishika S.Jayawardena Dinushani A.Daranagama Sirinapa Konta Ishani D.Goonasekara Wen-Ying Zhuang Rajesh Jeewon Alan J.L.Phillips Mohamed A.Abdel-Wahab Abdullah M.Al-Sadi Ali H.bahkali saranyaphat b.onmee Nattawut boonyuen Ratchadawan Cheewangkoon Asha J.Dissanayake Jichuan Kang Qi-Rui Li Jian Kui Liu Xing Zhong Liu Zuo-Yi Liu JJennifer Luangsa-ard Ka-Lai Pang Rungtiwa Phookamsak Itthayakorn Promputtha Satinee Suetrong Marc Stadler Tingchi Wen Nalin N.Wijayawardene Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Center of Excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniversityP.O.Box 34Al-Khod 123Oman Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha403108 GoaIndia Department of botany Goa UniversityGoa 403206India Engineering Research Center of Southwest bio-Pharmaceutical Resources Ministry of EducationGuizhou UniversityGuiyang 550025Guizhou ProvinceChina Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo 9 of ShuGuangHuaYuanZhangLuHaidian District Beijing 100097China State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101China Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Faculty of Sciences Biosystems and Integrative Sciences Institute(BioISI)University of LisbonCampo Grande1749-016 LisbonPortugal Department of botany Faculty of ScienceSohag UniversitySohagEgypt Fungal biodiversity Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Department of Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand Department of Pharmacy Guiyang Medical UniversityGuiyangGuizhou 550025China Microbe Interaction Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Institute of Marine biology and Center of Excell

Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate *** class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous *** occur in terrestrial,freshwater and marine habitats *** paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where *** paper brings together for the first time,since barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of *** of taxa is supported where possible by molecular *** outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 *** family Obryzaceae and Pleurotremataceae are excluded from the class.

关键词： Amplistromatales Annulatascales boliniales Calosphaeriales Chaetosphaeriales Coniochaetales Conioscyphales Cordanales Coronophorales Diaporthales Falcocladiales Glomerellales Hypocreales Jobellisiales Koralionastetales Lulworthiales Magnaporthales Melanosporales Meliolales Microascales Ophiostomatales Phylogeny Phyllachorales Pisorisporiales Pleurotheciales Sordariales Savoryellales Tirisporellales Togniniales Torpedosporales Trichosphaeriales Taxonomy Trichosphaeriales Type species Xylariales

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Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names

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Fungal Diversity 2014年第6期69卷 1-55页

作者： Nalin N.Wijayawardene Pedro W.Crous Paul M.Kirk David L.Hawksworth saranyaphat b.onmee Uwe braun Dong-Qin Dai Melvina J.D’souza Paul Diederich Asha Dissanayake Mingkhuan Doilom Singang Hongsanan E.b.Gareth Jones Johannes Z.Groenewald Ruvishika Jayawardena James D.Lawrey Jian-Kui Liu Robert Lücking Hugo Madrid Dimuthu S.Manamgoda Lucia Muggia Matthew P.Nelsen Rungtiwa Phookamsak Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Dhanushka N.Wanasinghe Saowanee Wikee Ying Zhang Andre Aptroot H.A.Ariyawansa Ali H.bahkali D.Jayarama bhat Cécile Gueidan Putarak Chomnunti G.Sybren De Hoog Kerry Knudsen Wen-Jing Li Eric H.C.McKenzie Andrew N.Miller Alan J.L.Phillips Marcin Piatek Huzefa A.Raja Roger S.Shivas bernad Slippers Joanne E.Taylor Qing Tian Yong Wang Joyce H.C.Woudenberg Lei Cai Walter M.Jaklitsch Kevin D.Hyde Key Laboratory for Plant Diversity and biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Institute of Excellence in Fungal Research Chiang Rai 57100Thailand Forestry and Agricultural biotechnology Institute(FAbI) University of PretoriaPretoria 0002South Africa CbS-KNAW Fungal biodiversity Centre Uppsalalaan 83584 CT UtrechtThe Netherlands State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing100101People_s Republicof China Mycology Section Royal Botanic GardensKewRichmondSurrey TW93DSUK Department of Life Sciences The Natural History MuseumCromwell RoadLondon SW75BDUK Departamento de biología VegetalⅡ Facultad de FarmaciaUniversidad Complutense de MadridPlaza Ramón y CajalMadrid 28040Spain School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institut Für biologie Martin-Luther-UniversitatBereich Geobotanik Und Botanischer GartenHerbariumNeuwerk 2106099 Halle(Saale)Germany Musée National d'histoire Naturelle 25 Rue MunsterL-2160 LuxembourgLuxembourg Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Department of botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Department of Environmental Science and Policy George Mason University4400 University DriveFairfaxVA 22030-4444USA Science and Education Integrative Research(Botany)The Field Museum1400 South Lake Shore DriveChicagoIL 60605-2496USA Institute of Plant Sciences University of GrazHolteigasse 68010GrazAustria Department of Life Science University of TriesteVia L.Giorgieri 10TriesteItaly Committee on Evolutionary biology University of Chicago1025 E.57th StreetChicagoIL 60637USA Fungal biodiversity Laboratory(bFbD) National Center for Gen

Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July *** that date,each fungal species can have one nomenclaturally correct name in a particular *** other previously used names for this species will be considered as *** older generic epithet takes priority over the younger *** widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic *** the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future *** taxonomic placements of 1261 genera are listed as an *** names and suppressed names for 34 pleomorphic genera are listed *** and justifications are provided for possible proposed names after the list of *** are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.

关键词： Article 59.1 Ascomycota One name Phylogeny Pleomorphism

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The Faces of Fungi database:fungal names linked with morphology,phylogeny and human impacts

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Fungal Diversity 2015年第5期74卷 3-18页

作者： Subashini C.Jayasiri Kevin D.Hyde Hiran A.Ariyawansa Jayarama bhat bart buyck Lei Cai Yu-Cheng Dai Kamel A.Abd-Elsalam Damien Ertz Iman Hidayat Rajesh Jeewon E.b.Gareth Jones Ali H.bahkali Samantha C.Karunarathna Jian-Kui Liu J.Jennifer Luangsa-ard H.Thorsten Lumbsch Sajeewa S.N.Maharachchikumbura Eric H.C.McKenzie Jean-Marc Moncalvo Masoomeh Ghobad-Nejhad Henrik Nilsson Ka-Lai Pang Olinto L.Pereira Alan J.L.Phillips Olivier Raspé Adam W.Rollins Andrea I.Romero Javier Etayo Faruk Selçuk Steven L.Stephenson Satinee Suetrong Joanne E.Taylor Clement K.M.Tsui Alfredo Vizzini Mohamed A.Abdel-Wahab Ting-Chi Wen saranyaphat b.onmee Dong Qin Dai Dinushani A.Daranagama Asha J.Dissanayake Anusha H.Ekanayaka S.C.Fryar Sinang Hongsanan Ruvishika S.Jayawardena Wen-Jing Li Rekhani H.Perera R.Phookamsak Nimali Ide Silva Kasun M.T.hambugala Qing Tian Nalin N.Wijayawardene Rui-Lin Zhao Qi Zhao Ji-Chuan Kang Itthayakorn Promputtha Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand World Agro forestry Centre East and Central Asia Office 132 Lanhei RoadKunming 650201China botany and Microbiology Department College of ScienceKing Saud UniversityRiyadh 1145Saudi Arabia Guizhou Key Laboratory of Agricultural biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha403108 GoaIndia Department of botany Goa UniversityGoa 403206India Muséum National d’Histoire Naturelle Département Systématique et EvolutionCP 39ISYEBUMR 7205 CNRS MNHN UPMC EPHE12 Rue BuffonF-75005 ParisFrance State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesWest Beicheng RdBeijingChina Institute of Microbiology Beijing Forestry UniversityPO Box 61Beijing 100083China Plant Pathology Research Institute Agricultural Research Center(ARC)12619 GizaEgypt botanic Garden Meise Department Bryophytes-Thallophytes(BT)Nieuwelaan 38B-1860 MeiseBelgium Fédération Wallonie-bruxelles Direction Générale de l’Enseignement non obligatoire et de la Recherche scientifiqueRue A.Lavallée 11080 BruxellesBelgium Microbiology Division Research Center for BiologyIndonesian Institute of Sciences(LIPI)Jl.Raya Jakarta-Bogor KM 46Cibinong 16911West JavaIndonesia Department of Health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Microbe Interaction Laboratory(bMIT) BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Science&Education The Field Museum1400 S.Lake Shore DriveChicagoIL 60605USA Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Department of Natural History Royal Ontario Museumand Department of Ecology and Evolutionary BiologyUniversity of Toronto100 Queen’s ParkTorontoON M5S2C6Canada Department of biotechnology Iranian Research Organiza

Taxonomic names are key links between various databases that store information on different *** global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and Mycobank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCbI,EbI and UNITE *** the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium *** is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable *** tackle this problem,a new database(FacesofFungi),accessible at ***(FoF)has been *** fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification *** addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type *** database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are *** FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical *** data include the three main fungal groups(Ascomycota,basidiomycota,basal fungi)and fungus-like *** FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological *** webpage has 76 curators,and with the help of these s

关键词： Classification Database Faces of Fungi Fungi Phylogeny Taxonomy

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