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Preoperative prediction of lymph node metastasis using deep learning-based features

Visual Computing for Industry,Biomedicine,and Art 2022年第1期5卷 88-98页

作者： Renee Cattell Jia Ying Lan Lei Jie Ding Shenglan Chen Mario Serrano sosa Chuan Huang Department of Biomedical Engineering Stony Brook UniversityNY 11794 Stony BrookUSA Department of Radiation Oncology Renaissance School of MedicineStony Brook UniversityStony BrookNY 11794USA Program in Public Health Stony Brook MedicineStony BrookNY 11794USA Department of Medicine Northside Hospital GwinnettGA 30046 LawrencevilleUSA Department of Radiation Oncology Medical College of WisconsinMilwaukeeWI 53226USA Institute of High Energy Physics Chinese Academy of SciencesBeijing 100049China Department of Radiology Renaissance School of MedicineStony Brook UniversityStony BrookNY 11794US

Lymph node involvement increases the risk of breast cancer *** accurate non-invasive assessment of nodal involvement is valuable in cancer staging,surgical risk,and cost *** has been proposed to pre-operatively predict sentinel lymph node(SLN)status;however,radiomic models are known to be sensitive to acquisition *** purpose of this study was to develop a prediction model for preoperative prediction of SLN metastasis using deep learning-based(DLB)features and compare its predictive performance to state-of-the-art ***,this study aimed to compare the generalizability of radiomics vs DLB features in an independent test set with dissimilar *** contrast-enhancement images from 198 patients(67 positive SLNs)were used in this *** these subjects,163 had an in-plane resolution of 0.7×0.7 mm^(2),which were randomly divided into a training set(approximately 67%)and a validation set(approximately 33%).The remaining 35 subjects with a different in-plane resolution(0.78×0.78 mm^(2))were treated as independent testing set for *** methods were employed:(1)conventional radiomics(CR),and(2)DLB features which replaced hand-curated features with pre-trained VGG-16 *** threshold determined using the training set was applied to the independent validation and testing *** feature reduction,feature selection,model creation procedures were used for both *** the validation set(same resolution as training),the DLB model outperformed the CR model(accuracy 83%vs 80%).Furthermore,in the independent testing set of the dissimilar resolution,the DLB model performed markedly better than the CR model(accuracy 77%vs 71%).The predictive performance of the DLB model outperformed the CR model for this *** interestingly,these improvements were seen particularly in the independent testing set of dissimilar *** could indicate that DLB features can ultimately result in a mor

关键词： Deep learning Radiomics Prediction model Lymph node metastasis Breast cancer

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Mexican Guidelines for the Diagnosis and Treatment of Chronic Myeloid Leukaemia

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Journal of Cancer Therapy 2013年第3期4卷 747-764页

作者： Eduardo Cervera Federico Godínez rosa sosa Ramón Rivas Carlos Best Juan Hernández Adrián Morales Hugo Zurita Ivette Carrasco Jorge Cruz álvaro Aguayo José Espinoza Juan Labardini Luis Valero Judith Cruz Diana Arcos Diego Limón Omar López-Navarro Daniela Gordillo-Bastidas Myrna Candelaria Francisco Torres Juan Kassack Oscar de Jesús Pérez Ramírez Jorge Aquino Guillermo Díaz Mariela Cardiel Margarita Rodríguez Patricia Montoya Juan Contreras María Chávez Sandra Chávez David Gómez Olga Cantú Jorge Duque Luis Pita Eduardo Lobato Julio López Antonio López Pedro González Jorge Cortés Haematology and Oncology Department National Institute of Medical and Nutrition Sciences “Dr. Salvador Zubirán” Mexico City Mexico Haematology Deparment from Hospital Juárez Mexico City Mexico Haematology Department Blood Bank and Unit of Aphaeresis General Hospital of Culiacán Health Ministry Culiacán Mexico Haematology Department Bone Marrow Transplant and Blood Bank from Hospital Regional de Alta Especialidad “Dr. Juan Graham Casassus” Villahermosa Mexico Haematology Department Cancerology National Institute (INCan) Mexico City Mexico Haematology Department Cancerology National Institute (INCan) Mexico City Mexico 2Internal Medicine Haematology Hospital ISSSTECALI Tijuana Mexico Haematology Department Centenario Hospital Miguel Hidalgo Health Ministry Aguascalientes Mexico Haematology Department General Hospital of Sonora State Sonora Mexico Haematology Department Hospital Universitario UANL Monterrey Mexico Haematology Haematology Service Hospital General Regional SSG León Mexico Haematology Head of Haematology Service School of Medicine Autonomous University of San Luis Potosí San Luis Potosí Mexico Haematology Hospital “Aranda de la Parra” León Mexico Haematology Hospital General de Especialidades Campeche Mexico Haematology Hospital General de México Mexico City Mexico Haematology Hospital General de Occidente SSA Guadalajara Mexico Haematology Hospital Regional de Alta Especialidad de Oaxaca Oaxaca Mexico Haematology Mérida Clinic Yucatán Mexico Haematology Oncology Unit SSEP Puebla Mexico Hospital Betania Puebla Mexico Hospital of the Poblano Child Puebla Mexico Internal Medicine Haematology Hospital ISSSTECALI Tijuana Mexico Leukaemias Clinic at ISSEMyM Toluca Mexico Leukemia Department MD Anderson Cancer Center Houston Mexico Los Mochis General Hospital Sinaloa Mexico Renaissance Clinic Morelia Mexico State Council for AIDS Prevention and Control Chihuahua Mexico Universidad Autónoma de Yucatán Mérida Mexico

Background: This document includes recommendations and guidelines issued by a group of Mexican researchers and specialists gathered in the First National Colloquium for the Diagnosis and Management of Chronic Myeloid Leukaemia (CML) by initiative of Instituto Nacional de Cancerología and with the support of the Leukaemia Department of the MD Anderson Cancer Center. Mexico lacks of updated information taken from its own reality on the diagnosis and treatment of CML and other haematological disorders;besides, there are no national guidelines. Aim: To publish a consensus document with guidelines for the management of CML adjusted to the national environment and overall characteristics. Method: The participants answered a DELPHI questionnaire about the overall aspects of the disease, aiming to target controversial topics, discuss them in the colloquium, and to agree on the best ones. After those meetings, a final document was drawn up. Results: The group presents recommendations for definition, diagnosis, prognosis, monitoring, and treatment of CML in Mexico. Conclusions: Having consensus guidelines for the clinical management of CML in our country will enable the consensual practice of Mexican specialists regarding the clinical approach to CML, as well as optimize the resources which allow the rational planning of the medical care strategies.

关键词： Chronic Myeloid Leukaemia Management Guidelines Diagnosis Treatment.

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A call for international research on COVID-19-induced brain dysfunctions

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National Science Review 2021年第12期8卷 13-14页

作者： Pedro A.Valdes-sosa Alan C.Evans Mitchell J.Valdes-sosa Mu-ming Poo Global Brain Consortium University of Electronic Sciences and Technology of China (UESTC) Cuban Neuroscience Center (CNEURO) Cuban Academy of Sciences Global Brain Consortium Royal Society of CanadaMc Gill Center for Integrative Neuroscience Mc Gill University Center for Excellence in Brain Science and Intelligence Technology Institute of NeuroscienceChinese Academy of Sciences

The COVID-19 pandemic, still raging worldwide, imposes staggering human and economic costs. These will only increase as many convalescent patients suffer consequences for many *** the virus can target multiple organ s...

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FedIDS:a federated cloud storage architecture and satellite image delivery service for building dependable geospatial platforms

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International Journal of Digital Earth 2018年第7期11卷 730-751页

作者： J.L.Gonzalez-Compean Victor J.sosa-sosa Arturo Diaz-Perez Jesus Carretero Ricardo Marcelin-Jimenez Cinvestav-Tamulipas Ciudad VictoriaMexico ARCOS Research Group University Carlos IIIMadridSpain UAM Iztapalapa CDMX and associated to InfotecMexico

Earth observation satellites produce large amounts of images/data that not only must be processed and preserved in reliable geospatial platforms but also efficiently disseminated among partners/researchers for creating derivative products through collaborative *** can face up this challenge in a cost-effective manner by using cloud ***,outages and violations of integrity/confidentiality associated to this technology could *** article presents FedIDS,a suite of cloud-based components for building dependable geospatial *** Fed component enables organizations to build shared geospatial data infrastructure through federation of independent cloud resources to withstand outages,whereas IDS avoids violations of integrity/confidentiality of images/data in sharing information and collaboration workflows.A FedIDS prototype,deployed in Spain and Mexico,was evaluated through a study case based on a satellite imagery captured by a Mexican antenna and another based on a satellite imagery of a European observation *** acquisition,storage and sharing of images among users of the federation,the exchange of images between Mexican and Spanish sites and outage scenarios were *** evaluation revealed the feasibility,reliability and efficiency of FedIDS,in comparison with available solutions,in terms of performance,storage consume and integrity/confidentiality when sharing images/data in collaborative scenarios.

关键词： Satellite imagery Earth observation archives spatial data infrastructure collaborative workflows security reliability

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Microbial electrosynthesis of acetate from CO_(2)in three-chamber cells with gas diffusion biocathode under moderate saline conditions

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Environmental Science and Ecotechnology 2023年第4期16卷 78-87页

作者： Paolo Dessì Claribel Buenano-Vargas Santiago Martínez-sosa Simon Mills Anna Trego Umer ZIjaz Deepak Pant Sebastia Puig Vincent O'Flaherty Pau Farras School of Biological and Chemical Sciences and Energy Research Centre Ryan InstituteUniversity of GalwayUniversity RoadH91 CF50GalwayIreland LEQUiA Institute of the EnvironmentUniversity of GironaCarrer Maria Aurelia Capmany 69E-17003GironaSpain Microbiology Department School of Natural SciencesUniversity of GalwayUniversity RoadH91 TK33GalwayIreland Infrastructure and Environment Research Division School of EngineeringUniversity of GlasgowGlasgowUnited Kingdom Separation and Conversion Technology Flemish Institute for Technological Research(VITO)Boeretang 2002400MolBelgium

The industrial adoption of microbial electrosynthesis(MES)is hindered by high overpotentials deriving from low electrolyte conductivity and inefficient cell *** this study,a mixed microbial consortium originating from an anaerobic digester operated under saline conditions(∼13 g L^(−1)NaCl)was adapted for acetate production from bicarbonate in galvanostatic(0.25 mA cm^(−2))H-type cells at 5,10,15,or 20 g L^(−1)NaCl *** acetogenic communities were successfully enriched only at 5 and 10 g L^(−1)NaCl,revealing an inhibitory threshold of about 6 g L^(−1)Na^(+).The enriched planktonic communities were then used as inoculum for 3D printed,three-chamber cells equipped with a gas diffusion *** cells were fed with CO_(2)gas and operated galvanostatically(0.25 or 1.00 mA cm^(−2)).The highest production rate of 55.4 g m^(−2) d^(−1)(0.89 g L^(−1)d^(−1)),with 82.4%Coulombic efficiency,was obtained at 5 g L^(−1)NaCl concentration and 1 mA cm^(−2)applied current,achieving an average acetate production of 44.7 kg MWh−*** electron microscopy and 16S rRNA sequencing analysis confirmed the formation of a cathodic biofilm dominated by Acetobacterium ***,three 3D printed cells were hydraulically connected in series to simulate an MES stack,achieving three-fold production rates than with the single cell at 0.25 mA cm^(−2).This confirms that three-chamber MES cells are an efficient and scalable technology for CO_(2)bio-electro recycling to acetate and that moderate saline conditions(5 g L^(−1)NaCl)can help reduce their power demand while preserving the activity of acetogens.

关键词： Acetobacterium Bioelectrochemical system Conductivity Electrochemical cell design Gas diffusion electrode

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Effect of the Laser Heating of Nanotube Nuclei on the Nanotube Type Population

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Nano Research 2009年第10期2卷 818-827页

作者： Pavel Nikolaev William Holmes Edward sosa Peter Boul Sivaram Arepalli Department of Energy Science Sungkyunkwan University300 Cheoncheon-dongJangan-guSuwon 440-746Korea Alan G.MacDiarmid NanoT ech Institute The University of Texas at Dallas800 West Campbell RoadRichardsonTX 75080USA ERC Inc./NASA Johnson Space Center Mail Stop ES-4P.O.Box 58561HoustonTX 77258USA

Many potential applications of carbon nanotubes are expected to benet from the availability of single-walled carbon nanotube materials enriched in metallic species,and specifically armchair *** present work focuses on the modification of the pulsed laser vaporization(PLV)technique to selectively produce certain carbon nanotube *** nuclei were“warmed-up”with an additional laser pulse,timed to coincide approximately with the nucleation *** effect of the second laser on the carbon vapor temperature was studied by emission *** type populations with and without warm-up were compared by means of absorption,photoluminescence,and Raman *** was found that the warm-up of nanotube nuclei with a laser pulse has a noticeable,albeit small,effect on the nanotube *** intensity of spectral features associated with(9,7)nanotube and its large chiral angle neighbors increased,while small chiral angle nanotubes decreased,with exception of the(15,0)*** experiment demonstrates that nanotube population during PLV synthesis can be manipulated in a controlled fashion.

关键词： Nanotube synthesis pulsed laser vaporization nanotube population

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A longitudinal network analysis of social dynamics in rooks corvus frugilegus： repeated group modifications do not affect social network in captive rooks

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Current Zoology 2017年第5期63卷 379-388页

作者： Palmyre H. BOUCHERIE Sebastian sosa Cristian PASQUARETTA Valerie DUFOUR Institut Pluridisciplinaire Hubert Curien University of Strasbourg 23 rue Becquerel 67087 Strasbourg France Centre National de la Recherche Scientifique UMR 7178 67087 Strasbourg France Formerly affiliated with Grupo de Conducta Adaptativa e Interacci6n Psychology Faculty University of Barcelona 08035 Barcelona Spain

Numerous studies have investigated the remarkable variation of social features and the resulting structures across species. Indeed, relationships are dynamic and vary in time according to various factors such as environmental conditions or individuals attributes. However, few studies have investigated the processes that stabilize the structures within a given species, and the behavioral mechanisms that ensure their coherence and continuity across time. Here, we used a dynamic actor-based model, RSiena, to investigate the consistency of the temporal dynamic of relationships of a group of captive rooks facing recurrent modifications in group composition (i.e., the loss and introduction of individuals). We found that changes in relationships (i.e., formation and removal) followed consistent patterns regardless of group composition and sex-ratio. Rooks preferentially interacted with paired congeners (i.e., unpopular attachment) and were more likely to form relationships with individuals bonded to a current social partner (i.e., “friends of friends”, or triadic closure). The sex of individuals had no effect on the dynamic of relationships. This robust behavioral mechanisms formed the basis of inter-connected networks, composed of sub-structures of individuals emerging from the enmeshment of dyadic and triadic motifs. Overall, the present study reveals crucial aspects of the behavioral mechanisms shaping rooks social structure, suggesting that rooks live in a well-integrated society, going far beyond the unique monogamous pair-bond.

关键词：社会网络乌鸦网络分析饲养修改行为机制人际关系组成关系

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Song divergence indicates an unclear relationship between the Neotropical and Nearctic Horned Larks

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Avian Research 2021年第2期12卷 161-172页

作者： Jimmy Alexander Vargas-Puentes Luis Alejandro Arias-sosa Carolina Ramos-Montaño Grupo Ecología de Organismos(GEO-UPTC) Escuela de Ciencias BiológicasUniversidad Pedagógica Y Tecnológica de ColombiaTunjaColombia

Background:Some studies have indicated that the Horned Larks(Eremophila alpestris)should be considered as a species *** it split into four species or clades and seven subclades based on genetic,morphological,and biogeographic ***,other aspects like song divergence have not been studied and several subspe-cies have not been evaluated,leading to important information gaps in this group of *** this work,we aimed to assess the differences in song traits and playback response between the Nearctic subclade and the Neotropical or Colombian subspecies ***:We compared six song traits between these groups and performed field playback experiments,to test the response of the Neotropical larks to both *** tested the difference in the variables for separate as well as by principal component analysis(PCA).Results:We found significant differences(p<0.05)in the individual song traits and the PCA analysis between the two ***,the PCA analysis showed a clearer divergence of the Neotropical songs in comparison to the Nearctic songs of different locations within North ***,the playback analysis showed a significantly lower response of *** to the songs of the Nearctic ***:Besides this song divergence,there are important ecological and biogeographic differences between the Neotropical and Nearctic Horned Larks,that indicate an unclear relationship between these two ***,further morphological and genetic studies are required to clarify the taxonomy of the Neotropical Horned Lark and define if they share the same evolutionary history as the other subspecies of the Nearctic subclade.

关键词： Birdsong Eremophila alpestris peregrina Song features Speciation Reproductive barrier

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Pendulum systems for harvesting vibration energy from railroad tracks and sleepers during the passage of a high-speed train: A feasibility evaluation

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Theoretical & Applied Mechanics Letters 2019年第4期9卷 229-235,I0005页

作者： Franco E.Dotti Mauricio D.sosa Grupo de Investigación en Multifísica Aplicada Universidad Tecnológica NacionalFacultad Regional Bahía Blanca.Consejo Nacional de Investigaciones Científicas y Técnicas.Argentina Grupo de Investigación en Multifísica Aplicada Universidad Tecnológica NacionalFacultad Regional Bahía Blanca.Argentina

We evaluate the feasibility of recovering energy from the vibrations of track and sleepers,during passage of a high-speed train,by means of a pendulum harvester.A simple mathematical model of the parametric pendulum is employed to obtain numerical predictions,while measured data of vibration tests during the passage of a Thalys high-speed train are considered as input *** a sustained rotation is the most energetic motion of a pendulum,the possibility of achieving such state is evaluated,taking into account the influence of initial conditions,damping and other *** simulations show that rotating pendulum harvesters with sufficiently low viscous damping could be able to generate a usable average power on the order of 5–6 W per *** a modular arrangement of devices,such energy is enough to feed variety of rail-side equipment,as wireless sensors or warning light ***,a suitable choice of initial conditions could be a difficult task,leading to the need of a control action.

关键词： Energy harvesting Parametric pendulum Railroad safety Train induced vibration

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The flowerpiercers interactions with a community of high Andean plants

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Avian Research 2021年第2期12卷 181-194页

作者： Jairo Andrés Cuta-Pineda Luis Alejandro Arias-sosa Roxibell C.Pelayo Research Group“Grupo Ecología de Organismos(GEO-UPTC)” TunjaColom-bia Maestría en Ciencia Biológicas Universidad Pedagógica y Tecnológica de ColombiaTunjaColombia Instituto de Ciencias Ambientales y Ecológicas(ICAE) Universidad de Los AndesMéridaVenezuela

Background:Flowerpiercers(Diglossa)are traditionally considered as“parasites”of the pollination processes,as they can access the nectar without entering in contact with the reproductive structures of the ***,the effect of flowerpiercers seems to vary according to their behavior and the flower’s ***,in this work,we aimed to explore the floral characteristics that may determine the susceptibility to robbing and pollen transport by ***,we identified the potential types of interactions and studied interaction network ***:We collected the information of 16 ornithophilic plants regarding their floral traits and robbing ***,we captured 4 species of flowerpiercers and evaluated pollen transport(frequency and loads).We tested the correlation between floral traits,robbing frequency,and pollen ***,we used these variables in a cluster and principal component analyses to identify the potential types of ***,we analyzed and com-pared the structure of the plants-flowerpiercers interaction ***:Nectar production significantly influenced both nectar robbing and pollen *** the corolla length was only correlated to the robbing ***,we found that particular flowerpiercers species trans-ported higher loads of some plant pollen,which can be related to the differences in behavior and morphometric *** proposed the classification of five different types of plant-flowerpiercer interactions,that showed differ-ent potential mutualist or antagonist relations based on the affectation of nectar robbing and the service of pollen *** interaction networks consisted of 49 links,with 2.4 links per species,and presented indicators of a medium to high resilience,stability,and resistance(nestedness,connectance,and robustness).Also,the network presented medium to low specialization and substantial niche ***:The ecological role of

关键词： Diglossa Flower traits Nectar robbing Nectivorous birds Pollen transport Pollination

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