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Genome-wide association analysis for stripe rust resistance in spring wheat(Triticum aestivum L.) germplasm

Journal of Integrative Agriculture 2020年第8期19卷 2035-2043页

作者： Sher muhammad muhammad SAJJAD Sultan Habibullah KHAN muhammad SHAHID muhammad ZUBAIR Faisal Saeed AWAN Azeem iqbal KHAN muhammad Salman MUBARAK Ayesha TAHIR muhammad UMER Rumana KEYANI muhammad InamAFZAL Irfan MANZOOR Javed Iqbal WATTOO Aziz-ur REHMAN Department of Bioinformatics and Biotechnology GC UniversityFaisalabad 38090Pakistan Department of Biosciences COMSATS University Islamabad(CUI)Islamabad 45550Pakistan Centre of Agricultural Biochemistry and Biotechnology(CABB) University of AgricultureFaisalabad 38000Pakistan Department of Plant Breeding and Genetics University of AgricultureFaisalabad 38000Pakistan Department of Biotechnology Faculty of Life SciencesUniversity of Central PunjabLahore 54000Pakistan Wheat Research Institute Ayub Agricultural Research Institute(AARI)Faisalabad 38950Pakistan

Stripe rust is a continuous threat to wheat crop all over the *** causes considerable yield losses in wheat crop every *** deployment of adult plant resistance(APR)genes in newly developing wheat cultivars is the most judicious strategy to combat this ***,we dissected the genetics underpinning stripe rust resistance in Pakistani wheat *** association panel of 94 spring wheat genotypes was phenotyped for two years to score the infestation of stripe rust on each accession and was scanned with 203 polymorphic *** on D’measure,linkage disequilibrium(LD)exhibited between loci distant up to 45 c ***-trait associations(MTAs)were determined using mixed linear model(MLM).Total 31 quantitative trait loci(QTLs)were observed on all 21 wheat *** QTLs were newly discovered as well as 19 QTLs and 35 previously reported Yr genes were validated in Pakistani wheat *** major QTLs were ***.2 AL and ***.3 BS(PVE,11.9%).Dissection of genes from the newly observed QTLs can provide new APR genes to improve genetic resources for APR resistance in wheat crop.

关键词： wheat Puccinia striiformis LD GWAS MTA PCoA

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Defocus Blur Segmentation Using Genetic Programming and Adaptive Threshold

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Computers, Materials & Continua 2022年第3期70卷 4867-4882页

作者： muhammad Tariq Mahmood Future Convergence Engineering School of Computer Science and EngineeringKorea University of Technology and EducationCheonan31253Byeongcheon-myeonKorea

Detection and classification of the blurred and the non-blurred regions in images is a challenging task due to the limited available information about blur type,scenarios and level of *** this paper,we propose an effective method for blur detection and segmentation based on transfer learning *** proposed method consists of two separate *** the first step,genetic programming(GP)model is developed that quantify the amount of blur for each pixel in the *** GP model method uses the multiresolution features of the image and it provides an improved blur *** the second phase,the blur map is segmented into blurred and non-blurred regions by using an adaptive threshold.A model based on support vector machine(SVM)is developed to compute adaptive threshold for the input blur *** performance of the proposed method is evaluated using two different datasets and compared with various state-of-the-art *** comparative analysis reveals that the proposed method performs better against the state-of-the-art techniques.

关键词： Blur measure blur segmentation sharpness measure genetic programming support vector machine

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Thermal evolution of aliphatic and aromatic moieties of asphaltenes from coals of different rank: possible implication to the molecular architecture of asphaltenes

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Chinese Journal Of Geochemistry 2015年第3期34卷 422-430页

作者： Aminu Bayawa muhammad Civil Engineering & Geosciences Newcastle University

The compositional and structural changes that coal asphaltenes undergo with increasing thermal maturation were investigated using solid-state13 C NMR and Fourier transform infrared spectroscopy. The results show a gradual increase in the relative proportion of carbon content with a concomitant decrease in the hydrogen, sulphur and oxygen content. The amount of aromatic carbon also increases while the aliphatic carbon decreases with increasing maturity. Ester and carboxylic groups are particularly sensitive to maturation and decrease in relative abundance with increasing maturity while the amount of aromatic carbonyl groups increases. In general, the asphaltenes were observed to evolve towards a more thermally stable structure with increasing amounts of aromatic moieties and relatively lower amounts of aliphatic moieties. The results are in agreement with the ultimate dominance of the island molecular architecture(the Yen–Mullins model) in asphaltenes.

关键词：分子结构煤沥青基芳香族沥青质热演化脂肪族傅里叶变换红外光谱煤阶

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Systematic study of(MoTa)_(x)NbTiZr medium-and high-entropy alloys for biomedical implants-In vivo biocompatibility examination

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Journal of Materials Science & Technology 2021年第19期78卷 183-191页

作者： muhammad Akmal Ahtesham Hussain muhammad Afzal Young Ik Lee Ho Jin Ryu Department of Materials Science and Engineering KAISTYuseongDaejeon 34141South Korea Lee's Biotech Co. Ltd.#415C-Dong13 Techno-4-roYuseong-guDaejeon34013South Korea Department of Mechanical Engineering KAISTYuseongDaejeon34141South Korea Department of Nuclear and Quantum Engineering KAISTYuseongDaejeon 34141South Korea

In this study,the application of medium-and high-entropy(Mo Ta)_(x)Nb Ti Zr alloys in biomedical implants was systematically *** alloy with the best combination of mechanical properties was selected and characterized for in vitro and in vivo response for the first time to examine its biomedical properties.A logarithmic increase in the hardness and the yield strength was observed as a function of the Mo and Ta *** with up to 0.4 mol fraction of Mo and Ta showed a plastic strain of more than 30%under *** nanoindentation results showed that the addition of Mo and Ta increased the elastic modulus of the system *** was surmised that the addition of Ta and Mo above a critical concentration(mole fraction=0.4)was unfavorable from a biomedical perspective as it increased the brittleness and elastic modulus and decreased the ductility of the ***,the(Mo Ta)_(0.2)Nb Ti Zr alloy is a potential structural material for biomedical implants because of its excellent strength and *** developed alloy was investigated for its corrosion properties and compared with commercial biomedical ***,the biocompatibility of the alloy was examined using an in vivo *** alloy was implanted in the skeletal muscles of mice for four weeks and the histology of the surrounding tissue was *** alloy exhibited strong passive behavior in a phosphate buffer solution and non-toxic soft tissue response.

关键词： High-entropy alloys Medium-entropy alloys Biomedical applications In vivo Biocompatibility

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Depositional and Bio-Sequence Stratigraphic Framework of Late Cretaceous Kawagarh Formation,Kala-Chitta Range,Pakistan:Equivalent of Gurpi Formation(Iran)

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Journal of Earth Science 2024年第2期35卷 332-348页

作者： muhammad Awais Bilal Wadood muhammad Ishaq muhammad Bilal Zeeshan Zafar Nasar Khan Aminullah Khan Department of Geology University of SwabiAnbar-SwabiKhyber PakhtunkhwaSwabi23561Pakistan Department of Earth Environmental and Resources SciencesUniversity of Naples FedericoⅡNaples80126Italy State Key Laboratory of Continental Dynamics Department of GeologyNorthwest UniversityXi’an710069China National Centre of Excellence in Geology University of PeshawarPeshawarKhyber Pakhtunkhwa25130Pakistan Department of Geological Engineering School of Earth Sciences and EngineeringXi’an Shiyou UniversityXi’an610500China Department of Petroleum Geology and Engineering School of Earth ResourcesChina University of GeosciencesWuhan430074China Department of Geology University of MalakandDir Lower18800ChakdaraPakistan Department of Earth and Environmental Sciences KU LeuvenLeuven3001Belgium

The present study is focused on evaluation of deep marine pelagic sediments of Late Cretaceous Kawagarh Formation of Kala-Chitta Range in the context of microfacies analysis,paleoenvironmental interpretation,planktonic foraminiferal biostratigraphy,sequence stratigraphy and diversification of species.A total of thirty three rock samples were collected from the measured *** microfacies are interpreted,namely planktonic foraminifera wackestone,planktonic foraminifera mudstone and sandy mudstone indicating low energy depositional environment i.e.,outer *** biostratigraphic studies show plentiful planktonic foraminifera species of Globotruncana,Heterohelix and ***,no association of benthic or siliceous organisms was *** the basis of available species assemblage,a single local planktonic foraminifera biozone i.e.,Globotruncana-Heterohelix-Globotruncanita Assemblage Biozone is *** biozone information is combined with published literature and Lower Santonian to Middle Maastrichtian age has been assigned to the Kawagarh *** trend of species occurrences evinces that species number decreases over time with pulsated rise in the Kawagarh *** Kawagarh Formation carbonates show an overall Transgressive Systems Tract(TST).The Kawagarh Formation of Pakistan evinces analogous characteristics to that of the Late Cretaceous Gurpi Formation of Iran based on the geologic age,outcrop lithology,microfacies,planktonic foraminiferal assemblages,depositional setting and sequence stratigraphy.

关键词： depositional fabric biostratigraphy sequence stratigraphy Late Cretaceous Kawagarh Formation Pakistan Gurpi Formation Iran

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Optical spin-symmetry breaking for high-efficiency directional helicity-multiplexed metaholograms

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Microsystems & Nanoengineering 2021年第2期7卷 71-79页

作者： muhammad Ashar Naveed muhammad Afnan Ansari Inki Kim Trevon Badloe Joohoon Kim Dong Kyo Oh Kashif Riaz Tauseef Tauqeer Usman Younis Murtaza Saleem muhammad Sabieh Anwar muhammad Zubair muhammad Qasim Mehmood Junsuk Rho NanoTech Lab Department of Electrical EngineeringInformation Technology University(ITU)of the PunjabFerozepur RoadLahore54600Pakistan Department of Mechanical Engineering Pohang University of Science and Technology(POSTECH)Pohang37673Republic of Korea Department of Physics Lahore University of Management Sciences(LUMS)Lahore54792Pakistan Department of Chemical Engineering Pohang University of Science and Technology(POSTECH)Pohang37673Republic of Korea National Institute of Nanomaterials and Technology(NINT) Pohang37673Republic of Korea

Helicity-multiplexed metasurfaces based on symmetric spin–orbit interactions (SOIs) have practical limits because they cannot provide central-symmetric holographic imaging. Asymmetric SOIs can effectively address such limitations, with several exciting applications in various fields ranging from asymmetric data inscription in communications to dual side displays in smart mobile devices. Low-loss dielectric materials provide an excellent platform for realizing such exotic phenomena efficiently. In this paper, we demonstrate an asymmetric SOI-dependent transmission-type metasurface in the visible domain using hydrogenated amorphous silicon (a-Si:H) nanoresonators. The proposed design approach is equipped with an additional degree of freedom in designing bi-directional helicity-multiplexed metasurfaces by breaking the conventional limit imposed by the symmetric SOI in half employment of metasurfaces for one circular handedness. Two on-axis, distinct wavefronts are produced with high transmission efficiencies, demonstrating the concept of asymmetric wavefront generation in two antiparallel directions. Additionally, the CMOS compatibility of a-Si:H makes it a cost-effective alternative to gallium nitride (GaN) and titanium dioxide (TiO2) for visible light. The cost-effective fabrication and simplicity of the proposed design technique provide an excellent candidate for high-efficiency, multifunctional, and chip-integrated demonstration of various phenomena.

关键词： directional breaking visible

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Modelling and Simulation of COVID-19 Outbreak Prediction Using Supervised Machine Learning

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Computers, Materials & Continua 2021年第3期66卷 2397-2407页

作者： Rachid Zagrouba muhammad Adnan Khan Atta-ur-Rahman muhammad Aamer Saleem muhammad Faheem Mushtaq Abdur Rehman muhammad Farhan Khan Department of Computer Information System College of Computer Science and Information TechnologyImam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia Department of Computer Science Riphah International UniversityLahore CampusLahore54000Pakistan Hamdard Institute of Engineering and Technology Hamdard UniversityIslamabad44000Pakistan Department of Information Technology Khwaja Fareed University of Engineering and Information TechnologyRahim Yar Khan64200Pakistan School of Computer Science NCBA&ELahore54000Pakistan Department of Forensic Sciences University of Health SciencesLahore54000Pakistan

Novel Coronavirus-19(COVID-19)is a newer type of coronavirus that has not been formally detected in *** is established that this disease often affects people of different age groups,particularly those with body disorders,blood pressure,diabetes,heart problems,or weakened immune *** epidemic of this infection has recently had a huge impact on people around the globe with rising mortality *** levels of mortality are attributed to their transmitting behavior through physical contact between *** is extremely necessary to monitor the transmission of the infection and also to anticipate the early stages of the disease in such a way that the appropriate timing of effective precautionary measures can be *** latest global coronavirus epidemic(COVID-19)has brought new challenges to the scientific *** Intelligence(AI)-motivated methodologies may be useful in predicting the conditions,consequences,and implications of such an *** forecasts may help to monitor and prevent the spread of these *** article proposes a predictive framework incorporating Support Vector Machines(SVM)in the forecasting of a potential outbreak of *** findings indicate that the suggested system outperforms cutting-edge *** method could be used to predict the long-term spread of such an outbreak so that we can implement proactive measures in *** findings of the analyses indicate that the SVM forecasting framework outperformed the Neural Network methods in terms of accuracy and computational *** proposed SVM system model exhibits 98.88%and 96.79%result in terms of accuracy during training and validation respectively.

关键词： Coronavirus outbreak machine learning artificial intelligence

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Appraisal of MsepCSP14 for chemosensory functions in Mythimna separata

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Insect Science 2022年第1期29卷 162-176页

作者： Aneela Younas muhammad Irfan Waris muhammad Shaaban muhammad Tahir ul Qamar Man-Qun Wang College of Plant Science and Technology Huazhong Agricultural UniversityWuhanChina Department of Soil Science Faculty of Agricultural Sciences and TechnologyBahauddin Zakariya UniversityMultanPakistan State Key Laboratory of Conservation and Utilization of Subtropical Agro-bioresources College of Life Science and TechnologyGuangxi UniversityNanning530005China

Chemosensory proteins (CSPs) have great contributions in performing diverse functions in insects. However, physiological appraisal of chemosensory protein genes still remains elusive in insects. We studied expression patterns and binding affinities of MsepCSP14, a chemosensory protein, in Mythimna separata. The distinct functions of MsepCSP14 were validated by employing different molecular techniques. The MsepCSP14 had high resemblance of sequence with chemosensory proteins of other insect family members. The MsepCSP14 expression was higher in antennal tissues of females than other tissues. Fluorescence binding assay validated that binding of nine out of 21 ligands to MsepCSP14 was higher at pH 7.4 than at pH 5.0. Three dimensional modeling (3D) and docking analysis predicted that amino acid residues of MsepCSP14 were involved in binding of compounds, and behavior assay displayed that adults of M. separata considerably responded to four volatiles from compounds demonstrating strong binding ability to MsepCSP14. Results of the present study suggest that MsepCSP14 is likely to mediate chemosensory functions in M. separata.

关键词： chemoreception expression pattern fluorescent binding olfaction oriental army worm Y-tube

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Analysis of the effect of passive measures on the energy consumption and zero-energy prospects of residential buildings in Pakistan

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Building Simulation 2021年第4期14卷 1325-1342页

作者： muhammad Wasim Anwar Zaib Ali Abdullah Javed Emad Ud Din muhammad Sajid School of Mechanical and Manufacturing Engineering National University of Sciences and TechnologyIslamabadPakistan

Climate change can adversely impact the thermal comfort and energy efficiency of the buildings stock. The South Asian countries are particularly vulnerable to the adverse impacts of climate change specially in the form of rising temperatures and increasing frequency of heat waves. The passive building design measures can be useful in mitigating and adapting to the climate change by increasing energy efficiency and reducing greenhouse gas (GHG) emissions. In this study various passive climate change adaptation measures (PCAMs) have been used individually and in form of combinations in order to analyze their impact on the energy efficacy of residential buildings in Pakistan. It has been found that the natural ventilation and front green wall are the most efficient options for reducing the overall energy consumption. By implementation of these PCAMs, cooling demand can be decreased by 27.75% while heating demand can be reduced by 35%. Secondly, the prospect of net zero-energy building and reduced CO2 emissions are also studied. It has been shown that building can achieve net-zero energy on an annual basis at every orientation and it can attain the status of nearly zero-energy building on a monthly basis. Moreover, emitted CO2 can be reduced by 31% by using the renewable energy.

关键词： building energy simulations net zero-energy passive climate adaptation measures climate change energy consumption Pakistan

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Entropies of the Y-Junction Type Nanostructures

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Computer Modeling in Engineering & Sciences 2023年第6期135卷 2665-2679页

作者： Ricai Luo Aisha Javed muhammad Azeem muhammad Kamran Jamil Hassan Raza muhammad Yasir Ilyas School of Mathematics and Physics Hechi UniversityYizhou456300China Abdus Salam School of Mathematical Sciences Government College UniversityLahore54000Pakistan Department of Mathematics Riphah Institute of Computing and Applied SciencesRiphah International UniversityLahore54000Pakistan School of Mathematical Sciences College of Science and TechnologyWenzhou-Kean UniversityWenzhou325060China Department of Physics COMSATS University IslamabadLahore54000Pakistan

Recent research on nanostructures has demonstrated their importance and application in a variety of *** are used directly or indirectly in drug delivery systems,medicine and pharmaceuticals,biological sensors,photodetectors,transistors,optical and electronic devices,and so *** discovery of carbon nanotubes with Y-shaped junctions is motivated by the development of future advanced electronic *** of their interactionwithY-junctions,electronic switches,amplifiers,and three-terminal transistors are of particular *** is a concept that determines the uncertainty of a system or *** concepts are also used in biology,chemistry,and applied *** on the requirements,entropy in the form of a graph can be classified into several *** 1955,graph-based entropy was *** of the types of entropy is edgeweighted *** examined the abstract form of Y-shaped junctions in this *** edge-weight-based entropy formulas for the generic view of Y-shaped junctions were created,and some edge-weighted and topological index-based concepts for Y-shaped junctions were discussed in the present paper.

关键词： Y-shaped junctions three-terminal junctions nanostuctures entropy carbon nanotube

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