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Automated diagnosis and staging of Fuchs' endothelial corneal dystrophy using deep learning

Eye and Vision 2023年第2期9卷 1-11页

作者： Taher Eleiwa Amr Elsawy Eyup Ozcan mohamed abou shousha Bascom Palmer Eye Institute Miller School of MedicineUniversity of MiamiMiamiFlorida 33136USA Department of Ophthalmology Faculty of MedicineBenha UniversityBenhaEgypt Electrical and Computer Engineering University of MiamiCoral GablesFloridaUSA Net Eye Medical Center GaziantepTurkey Biomedical Engineering University of MiamiCoral GablesFloridaUSA.

Background:To describe the diagnostic performance of a deep learning algorithm in discriminating early-stage Fuchs'endothelial corneal dystrophy(FECD)without clinically evident corneal edema from healthy and late-stage FECD eyes using high-definition optical coherence tomography(HD-OCT).Methods:In this observational case-control study,104 eyes(53 FECD eyes and 51 healthy controls)received HDOCT imaging(Envisu R2210,Bioptigen,Buffalo Grove,IL,USA)using a 6 mm radial scan pattern centered on the corneal *** was clinically categorized into early(without corneal edema)and late stage(with corneal edema).A total of 18,720 anterior segment optical coherence tomography(AS-OCT)images(9180 healthy;5400 early-stage FECD;4140 late-stage FECD)of 104 eyes(81 patients)were used to develop and validate a deep learning classification network to differentiate early-stage FECD eyes from healthy eyes and those with clinical *** 5-fold cross-validation on the dataset containing 11,340 OCT images(63 eyes),the network was trained with 80%of these images(3420 healthy;3060 early-stage FECD;2700 late-stage FECD),then tested with 20%(720 healthy;720 early-stage FECD;720 late-stage FECD).Thereafter,a final model was trained with the entire dataset consisting the 11,340 images and validated with a remaining 7380 images of unseen AS-0CT scans of 41 eyes(5040 healthy;1620 early-stage FECD 720 late-stage FECD).Visualization of learned features was done,and area under curve(AUC),specificity,and sensitivity of the prediction outputs for healthy,early and late-stage FECD were ***:The final model achieved an AUC of 0.997±0.005 with 91%sensitivity and 97%specificity in detecting early-stage FECD;an AUC of 0.974±0.005 with a specificity of 92%and a sensitivity up to 100%in detecting late-stage FECD;and an AUC of 0.998±0.001 with a specificity 98%and a sensitivity of 99%in discriminating healthycorneas fromall ***:Deep learning algorithm is an accurate autonomous

关键词： Optical coherence tomography Descemet's membrane Comeal endothelium Fuchs endothelial dystrophy

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Automated diagnosis and staging of Fuchs’endothelial cell corneal dystrophy using deep learning

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Eye and Vision 2020年第1期7卷 423-433页

作者： Taher Eleiwa Amr Elsawy EyüpÖzcan mohamed abou shousha Bascom Palmer Eye Institute Miller School of MedicineUniversity of MiamiMiamiFlorida 33136USA Department of Ophthalmology Faculty of MedicineBenha UniversityBenhaEgypt Electrical and Computer Engineering University of MiamiCoral GablesFloridaUSA Net Eye Medical Center GaziantepTurkey Biomedical Engineering University of MiamiCoral GablesFloridaUSA

Background:To describe the diagnostic performance of a deep learning algorithm in discriminating early-stage Fuchs’endothelial corneal dystrophy(FECD)without clinically evident corneal edema from healthy and late-stage FECD eyes using high-definition optical coherence tomography(HD-OCT).Methods:In this observational case-control study,104 eyes(53 FECD eyes and 51 healthy controls)received HDOCT imaging(Envisu R2210,Bioptigen,Buffalo Grove,IL,USA)using a 6 mm radial scan pattern centered on the corneal *** was clinically categorized into early(without corneal edema)and late-stage(with corneal edema).A total of 18,720 anterior segment optical coherence tomography(AS-OCT)images(9180 healthy;5400 early-stage FECD;4140 late-stage FECD)of 104 eyes(81 patients)were used to develop and validate a deep learning classification network to differentiate early-stage FECD eyes from healthy eyes and those with clinical *** 5-fold cross-validation on the dataset containing 11,340 OCT images(63 eyes),the network was trained with 80%of these images(3420 healthy;3060 early-stage FECD;2700 late-stage FECD),then tested with 20%(720 healthy;720 early-stage FECD;720 late-stage FECD).Thereafter,a final model was trained with the entire dataset consisting the 11,340 images and validated with a remaining 7380 images of unseen AS-OCT scans of 41 eyes(5040 healthy;1620 early-stage FECD 720 late-stage FECD).Visualization of learned features was done,and area under curve(AUC),specificity,and sensitivity of the prediction outputs for healthy,early and late-stage FECD were ***:The final model achieved an AUC of 0.997±0.005 with 91%sensitivity and 97%specificity in detecting early-FECD;an AUC of 0.974±0.005 with a specificity of 92%and a sensitivity up to 100%in detecting late-stage FECD;and an AUC of 0.998±0.001 with a specificity 98%and a sensitivity of 99%in discriminating healthy corneas from all ***:Deep learning algorithm is an accurate autonomous nove

关键词： Optical coherence tomography Descemet’s membrane Corneal endothelium Fuchs endothelial dystrophy

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Correlation between DKK-1 Level and Bone Density Status in Children on Maintenance Haemodialysis

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Open Journal of Nephrology 2024年第1期14卷 48-61页

作者： Manal Abd El-Salam Marwa mohamed Anwar Rasha Mahmoud Gouda Naglaa abou El Fattah Nadia Youssef Riad Department of Pediatrics Faculty of Medicine (For Girls) Al-Azhar University Cairo Egypt Department of Internal Medicine Faculty of Medicine (For Girls) Al-Azhar University Cairo Egypt Department of Clinical Pathology National Heart Institute Cairo Egypt

Background: Renal osteodystrophy (ROD) is a bone disorder resulting from chronic kidney disease (CKD) and related metabolic diseases. Dickkopf-related protein-1 (DKK-1) is critical in regulating bone biology. This study aimed to evaluate the serum DKK-1 level as a bone marker in children with CKD who undergo regular hemodialysis (HD). Subjects and Methods: This case-control study involved 40 children with CKD on HD and 40 healthy children as controls. The study measured serum DKK-1 levels and performed a dual-energy X-ray absorptiometry scan (DEXA) in line with routine laboratory investigations. Results: There was a significant increase in the serum level of DKK-1 in the patient group compared to the control group. The DKK-1 levels were 2540.65 (2215.4 - 2909.2) pg/ml and 1110.45 (885.45 - 1527.65) pg/ml, respectively, with a p-value of less than 0.001. In the hemodialysis group, 25 patients (62.5%) had low bone mineral density (BMD) with a Z-score of under -2.0. Eighteen of these patients had low BMD in both the neck of the femur and lumbar spines. Additionally, there was a significant increase in serum DKK-1 level in patients with low BMD (2567.35 (2303.8 - 3108.1) pg/ml) compared to patients with normal BMD (2454 (1859 - 2820) pg/ml) (p = 0.041). There was also a significant positive correlation between DKK1 level and phosphorus, alkaline phosphatase, and Parathormone serum levels. In conclusion, the study indicates a clear correlation between DKK-1 and BMD in children undergoing maintenance hemodialysis. DKK1 is a promising biomarker for CKD-MBD.

关键词： DKK-1 Children Haemodialysis Bone Density Status

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Prevalence and outcomes of polycystic kidney disease in African populations:A systematic review

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World Journal of Nephrology 2024年第1期13卷 33-40页

作者： Modou Ndongo Lot Motoula Nehemie Baratou Coundoul abou Abdallah Malick Diouara Sidy mohamed Seck Department of Nephrology and Dialysis Regional Hospital of KedougouKedougou 26005Senegal Department of Nephrology and Dialysis Military Hospital of OuakamDakar 28216Senegal Department of Chemical Engineering and Applied Biology Polytechnic high School of Cheikh Anta Diop UniversityDakar 5085Senegal Department of Nephrology Faculty of Health SciencesUniversity Gaston BergerSaint-Louis 234Senegal

BACKGROUND Polycystic kidney disease(PKD)is the most common genetic cause of kidney *** is a progressive and irreversible condition that can lead to end-stage renal disease and many other visceral *** comprehensive data on PKD patterns in Africa is *** To describe the prevalence and outcomes of PKD in the African *** A literature search of PubMed,African journal online,and Google Scholar databases between 2000 and 2023 was *** Preferred Reporting Items for Systematic Reviews and Meta-Analyses were followed to design the *** presentations and outcomes of patients were extracted from the included *** Out of 106 articles,we included 13 studies from 7 African *** of them were retrospective descriptive studies concerning 943 PKD patients with a mean age of 47.9 *** accurate prevalence and incidence of PKD were not known but it represented the third causal nephropathy among dialysis *** majority of patients,the diagnosis of the disease was often *** function impairment,abdominal mass,and hypertension were the leading symptoms at presentation with a pooled prevalence of 72.1%(69.1-75.1),65.8%(62.2-69.4),and 57.4%(54.2-60.6)*** and infections were the most frequent *** was performed in few studies that revealed a high proportion of new mutations mainly in the PKD1 *** The prevalence of PKD in African populations is not clearly *** symptoms were almost present with most patients who had kidney function impairment and abdominal mass at the *** studies including genetic testing are needed to determine the burden of PKD in African populations.

关键词： Polycystic kidney disease Africa Genetic disorder Systematic review

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Patterns of liver profile disturbance in patients with COVID-19

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World Journal of Clinical Cases 2022年第7期10卷 2063-2071页

作者： Hend Ibrahim shousha Ahmed Ramadan Rania Lithy mohamed El-Kassas Department of Endemic Medicine Faculty of MedicineCairo UniversityCairo 12556Egypt Department of Endemic Medicine Faculty of MedicineHelwan UniversityCairo 11795Egypt

Fever and cough are the most common clinical symptoms of coronavirus disease 2019(COVID-19),but complications(such as pneumonia,respiratory distress syndrome,and multiorgan failure)can occur in people with additional ***-19 may be a new cause of liver disease,as liver profile disturbance is one of the most common findings among *** molecular mechanism underlying this phenomenon,however,is still *** this paper,we review the most current research on the patterns of change in liver profile among patients with COVID-19,the possible explanation for these findings,and the relation to pre-existing liver disease in these patients.

关键词： Liver functions COVID-19 Liver profile Alanine transaminase aspartate transaminase Bilirubin

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The utility of X-Ray fluorescence spectrometry as a tool for monitoring compliance with limits on concentrations of halogenated flame retardants in waste polymers:A critical review

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Emerging Contaminants 2022年第1期8卷 9-20页

作者： Misbah Alghamdi mohamed abou-Elwafa Abdallah Stuart Harrad School of Geography Earthand Environmental SciencesUniversity of BirminghamBirminghamB152TTUK

This study reviews current knowledge about the presence of brominated and chlorinated organophosphate flame retardants(BFRs and Cl-OPFRs)in plastic consumer articles,with particular reference to the potential as a result of recycling,for such chemicals to unintentionally contaminate articles in which flame retardants are not *** minimize such unintentional contamination,jurisdictions such as the EU(European Union)have introduced limits on concentrations of some BFRs in waste plastics,with articles exceeding such limits prevented from being *** technical and economic constraints associated with the conventional methods for determining compliance with such limit values exist,leading to less specific,but simpler,more rapid,and less expensive methods such as portable X-ray fluorescence(XRF)spectrometry being identified as possible *** paper thus examines the evidence that XRF offers a viable method for checking compliance with existing and possible future limits on BFRs and Cl-OPFRs in waste plastics and identifies future research priorities.

关键词： Waste plastics Low POP concentration limits PBDEs HBCDD Chlorinated organophosphate esters XRF screening

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pH-indicative Films Based on Chitosan–PVA/Sepiolite and Anthocyanin from Red Cabbage: Application in Milk Packaging

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Journal of Bionic Engineering 2022年第3期19卷 837-851页

作者： Marya Raji Laila El Foujji mohamed El Mehdi Mekhzoum Mounir El Achaby Hamid Essabir Rachid Bouhfid abou el kacem Qaiss Moroccan Foundation for Advanced Science Innovation and ResearchComposites and Nanocomposites CenterRabat Design CenterRue Mohamed El JazouliMadinat El IrfaneRabat10100Morocco Faculty of Science Laboratoire de Chimie Organique Et HétérocycliqueUniversity Mohammed V in RabatRabat10100Morocco Materials Science and Nano-Engineering Department Mohammed VI Polytechnic UniversityLot 660–Hay Moulay RachidBen Guerir43150Morocco Mechanic Materialsand Composites(MMC)Laboratory of Energy EngineeringMaterials and SystemsNational School of Applied Sciences of AgadirIbn Zohr UniversityAgadir80000Morocco

Biobased smart packaging is been the most interesting research *** this study,pH-sensitive films based on anthocyanin molecules from red cabbage and sepiolite mineral nano-clay as functional additives were *** films were fabricated by casting method of blend polymer Chitosan/Poly(Vinyl Alcohol)at two fillers loading(5wt.%and 10wt.%).The structural,morphological,thermal,optical,hygroscopic,and mechanical properties as well as the pH sensitivity of films were *** thermal properties confirm that the amount of the anthocyanin in sepiolite was around 6.4%.The tensile strength and the young’s modulus of produced composites at 10wt.%sepiolite–anthocyanin content was increased to 8.90 MPa and 163 MPa,*** maximum water absorption that the films may absorb was 12.3%.pH sensitivity analysis showed that the Smart films change the color by changing the pH level,from pink at pH lower than 6 to yellow at pH higher than ***,the developed pH-sensitive films show band gaps in visible light that make them useful for monitoring milk spoilage.

关键词： Smart packaging Anthocyanin Red cabbage pH-sensitive and milk spoilage

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Concentrations of organophosphate esters in drinking water from the United Kingdom:Implications for human exposure

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Emerging Contaminants 2023年第1期9卷 76-84页

作者： Muideen Remilekun Gbadamosi Layla Salih Al-Omran mohamed abou-Elwafa Abdallah Stuart Harrad School of Geography Earth and Environmental Sciences University of BirminghamBirminghamUK Department of Chemical Sciences Tai Solarin University of EducationIjebu-OdeOgun StateNigeria Department of Chemistry College of ScienceUniversity of BasrahBasrahIraq

Data on the presence of organophosphate esters(OPEs)in drinking water and its significance as a pathway of exposure are *** this study,we measure for the first time,concentrations of eight OPEs in 50 UK drinking water *** mean concentrations of ∑8OPEs were:6.4 and 11 ng/L in bottled(n=25)and tap water samples(n=25),*** of ∑8OPEs in tap water(mean:11 ng/L)exceed significantly those in bottled water(mean:6.4 ng/L)(p˂0.01).Moreover,UK tap water is more contaminated with chlorinated,aryl-,and alkyl-OPEs than bottled *** predominant OPEs detected were:tris(butoxyethyl)phosphate(TBOEP),tris(2-chloroethyl)phosphate(TCEP),and tris(2-chloroisopropyl)phosphate(TCIPP)with arithmetic mean concentrations in the two water sample types ranging between(3.5e3.8 ng/L),(0.60-3.0 ng/L),and(1.02-2.9 ng/L),*** daily intakes(EDIs)(mean and high-end exposure)via drinking water for different sectors of the UK population were:infants(0.93 and 6.4 ng/kg bw/day)˃toddlers(0.46 and 3.1 ng/kg bw/day)˃children(0.35 and 2.3 ng/kg bw/day)˃adults(0.28 and 2.1 ng/kg bw/day).Based on these data,exposure to ∑8OPEs via drinking water is much lower than via:food,indoor dust ingestion,inhalation,and dermal uptake for adults and ***,our EDIs were lower than relevant reference dose(RfD)***,combining our drinking water ingestion data with exposure via other pathways revealed overall exposure to 2-ethylhexyl diphenyl phosphate(EHDPP)and TCIPP to approach health-based limit values for UK toddlers under a high-end exposure scenario.

关键词： Daily intakes Tap water Reference dose and high-end exposure scenario

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Improvement of Selected Morphological, Physiological, and Biochemical Parameters of Banana (Musa acuminata L.) Using Potassium Silicate under Drought Stress Condition Grown in vitro

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Phyton-International Journal of Experimental Botany 2023年第4期92卷 1019-1036页

作者： Hosny Abdel Aziz mohamed Sharaf Magdy Omar Ahmed abou El-Yazied Nada Ibrahim AlJwaizea Shaimaa Ismail mohamed M.A.Omar Khadiga Alharbi Amr Elkelish Moataz Tawfik Department of Horticulture Faculty of AgricultureAl-Azhar UniversityCairo11651Egypt Department of Biochemistry Faculty of AgricultureAl-Azhar UniversityCairo11651Egypt Department of Biochemistry and Molecular Biology College of Marine Life SciencesOcean University of ChinaQingdao266003China Department of Agricultural Botany Faculty of AgricultureAl-Azhar UniversityNasr CityCairo11751Egypt Department of Horticulture Faculty of AgricultureAin Shams UniversityCairo11566Egypt Department of Biology College of SciencePrincess Nourah bint Abdulrahman UniversityRiyadh11671Saudi Arabia Department of Biochemistry Faculty of AgricultureAin Shams UniversityCairo11566Egypt Biology Department College of ScienceImam Mohammad ibn Saud Islamic University(IMSIU)Riyadh11623Saudi Arabia Botany Department Faculty of ScienceSuez Canal UniversityIsmailia41522Egypt Botany Department Faculty of SciencePort Said UniversityPort Said42511Egypt

Drought stress has become more common in recent years as a result of climate change impacts on the production of banana crops and other fruit *** growth and productivity of Musa spp are severely impacted by the gradual degradation of water resources and the erratic distribution pattern of annual precipitation *** aim of the work includes increased drought tolerance in light of water scarcity in the world as a result of the bananas’being gluttonous for water *** investigation was carried out from 2019 to 2020 to study the effect of potassium silicate on morphological growth and biochemical parameters of Musa acuminata L under drought stress by *** a result,drought stress reduced the morphological characteristics such as shoots number,shoot length,roots number,and survival percentage and biochemical characteristics such as chlorophyll a,b,carotenoids,stomatal status,and *** proline content increased in the leaf of *** *** complemented with K2SiO3(2 to 6 mM)either individually or in combination with PEG led to an improvement in all morphological and biochemical *** activities of CAT,POD,and PPO enzymes increased significantly compared to ***,the lowest PPO,CAT,and POD activity were ***,K2SiO3 treatments under drought stress successfully enhanced the leaf stomatal *** results suggest that K2SiO3 can help to maintain plant integrity in the tested cultivar under drought stress.

关键词： Musa acuminata L potassium silicate photosynthetic pigments stomata enzymatic activity

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Assessment of circulating levels of microRNA-326,microRNA-424,and microRNA-511 as biomarkers for hepatocellular carcinoma in Egyptians

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World Journal of Hepatology 2022年第8期14卷 1562-1575页

作者： Samar Samir Youssef Asmaa Elfiky mohamed M Nabeel Hend Ibrahim shousha Tamer Elbaz Dalia Omran Mohammad Saeed Marie Mohammad A Elzahry Amr Abul-Fotouh Ahmed Hashem mohamed F Guda Ashraf O Abdelaziz Department of Microbial Biotechnology National Research CentreCairo 1211Egypt Department of Environmental and Occupational Medicine National Research CentreCairo 1211Egypt Department of Endemic Medicine and Hepatogastroenterology Faculty of MedicineCairo UniversityCairo 11562 Egypt Department of Endemic Medicine Faculty of MedicineCairo UniversityCairo 1256Egypt Theodor Bilharz Research Institute Cairo 1256Egypt

BACKGROUND Hepatocellular carcinoma(HCC)is the fifth most common *** expression of microRNAs(miRNAs)-326,miRNA-424,and miRNA-511 has been associated with the diagnosis and prognosis of HCC in different ***,limited information is available regarding their expression in Egyptian HCC *** To assess the role of circulating miRNAs-326,miRNA-424,and miRNA-511 in Egyptian HCC *** This prospective observational study included 70 HCC patients and 25 healthy *** circulating levels of these three miRNAs were evaluated by real-time *** operating characteristic curve analysis was used to test the diagnostic accuracy of micro RNA expression *** All miRNAs were differentially expressed in HCC patients;miRNAs326 and miRNA-424 were upregulated,while miRNA-511 was *** miRNA-326 and miRNA-424 showed sensitivity and specificity of 97%,71.4%,and 52%,60%,respectively,to differentiate HCC from ***,miRNA-326 was associated with survival and could differentiate between Child grades(A vs B);miRNA-424 significantly differentiated early vs intermediate stages of HCC;while miRNA-511 was significantly correlated with response to modified Response Evaluation Criteria in Solid Tumors(m RECIST).CONCLUSION We conclude that miRNA-326,miRNA-424,and miRNA-511 have diagnostic and prognostic roles in Egyptian patients with hepatitis C virus-related HCC and should be considered for better disease management.

关键词： Hepatocellular carcinoma miRNAs-326 miRNA-424 miRNA-511 Modified response evaluation criteria in solid tumors

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