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Epididymis-specific lipocalin promoters

Asian Journal of Andrology 2007年第4期9卷 515-521页

作者： Kichiya Suzuki Xiuping Yu Pierre Chaurand Yoshihiko Araki Jean-Jacques Lareyre Richard M. Caprioli marie-claire orgebin-crist Robert J. Matusik Department of Obstetrics and Gynecology Tohoku University Graduate School of Medicine Sendai 980-8574 Japan Departments of Urologic Surgery Vanderbilt University School of Medicine Nashville Tennessee 37232 USA Departments of Biochemistry Vanderbilt University School of Medicine Nashville Tennessee 37232 USA Departments of Obstetrics and Gynecology Vanderbilt University School of Medicine Nashville Tennessee 37232 USA Departments of Cell and Developmental Biology Vanderbilt University School of Medicine Nashville Tennessee 37232 USA Departments of Mass Spectrometry Research Center and Vanderbilt University School of Medicine Nashville Tennessee 37232 USA Departments of Center for Reproductive Biology Research Vanderbilt University School of Medicine Nashville Tennessee 37232 USA

Our goal is to decipher which DNA sequences are required for tissue-specific expression of epididymal genes. At least 6 epididymis-specific lipocalin genes are known. These are differently regulated and regionalized in the epididymis. Lipocalin 5 （Lcn5 or mE-RABP） and Lipocalin 8 （Lcn8 or mEP17） are homologous genes belonging to the epididymis-specific lipocalin gene cluster. Both the 5 kb promoter fragment of the Lcn5 gene and the 5.3 kb promoter fragment of the Lcn8 gene can direct transgene expression in the epididymis （Lcn5 to the distal caput and Lcn8 to the initial segment）, indicating that these promoter fragments contain important cis-regulatory element（s） for epididymisspecific gene expression. To define further the fragments regulating gene expression, the Lcn5 promoter was examined in transgenic mice and immortalized epididymal cell lines. After serial deletion, the 1.8 kb promoter fragment of the Lcn5 gene was sufficient for tissue-specific and region-specific gene expression in transgenic mice. Transient transfection analysis revealed that a transcription factor forkhead box A2 （Foxa2） interacts with androgen receptor and binds to the 100 bp fragment of the Lcn5 promoter between 1.2 kb and 1.3 kb and that Foxa2 expression inhibits androgen-dependent induction of the Lcn5 promoter activity. Immunohistochemistry indicated a restricted expression of Foxa2 in the epididymis where endogenous Lcn5 gene expression is suppressed and that the Foxa2 inhibition of the Lcn5 promoter is consistent with the lack of expression of Lcn5 in the corpus and cauda. Our approach provides a basic strategy for further analysis of the epididymal lipocalin gene regulation and flexible control of epididymal function. （Asian J Androl 2007 July; 9： 515-521）

关键词： androgen epididymis gene cluster gene evolution gene regulation lipocalin transcription factor

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Deep learning for broadleaf weed seedlings classification incorporating data variability and model flexibility across two contrasting environments

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Artificial Intelligence in Agriculture 2024年第2期12卷 29-43页

作者： Lorenzo León cristóbal Campos Juan Hirzel Instituto de Investigaciones Agropecuarias(INIA) INIA QuilamapuAvda.Vicente Méndez 515ChillánChile Fundacion ObservatorioÑuble Arauco 340ChillanChile

The increasing deployment of deep learning models for distinguishing weeds and crops has witnessed notable strides in agricultural ***,a conspicuous gap endures in the literature concerning the training and testing of models across disparate environmental *** methodologies either delineate a single dataset distribution into training,validation,and testing subsets or merge datasets from diverse condi-tions or distributions before their division into the *** study aims to ameliorate this gap by extending to several broadleaf weed categories across varied distributions,evaluating the impact of training convolutional neural networks on datasets specific to particular conditions or distributions,and assessing their performance in entirely distinct settings through three *** evaluating diverse network architectures and training approaches(finetuning versus feature extraction),testing various architectures,employing different training strategies,and amalgamating data,we devised straightforward guidelines to ensure the model's deployability in contrasting environments with sustained precision and *** Experiment 1,conducted in a uniform environment,accuracy ranged from 80%to 100%across all models and training strategies,with finetune mode achieving a superior performance of 94%to 99.9%compared to the feature extraction mode at 80%to 92.96%.Experiment 2 underscored a significant performance decline,with accuracy fig-ures between 25%and 60%,primarily at 40%,when the origin of the test data deviated from the train and valida-tion *** 3,spotlighting dataset and distribution amalgamation,yielded promising accuracy metrics,notably a peak of 99.6%for ResNet in finetuning mode to a low of 69.9%for InceptionV3 in feature extraction *** pivotal findings emphasize that merging data from diverse distributions,coupled with finetuned training on advanced architectures like ResNet and MobileNet,markedly enhances

关键词： Artificial neural networks Deep learning Transfer learning Precision farming Feature extraction Finetuning Generalization Out-of-domain distribution Domain adaptation Multi-domain learning

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Change in observed long-term greening across Switzerlandevidence from a three decades NDVI time-series and its relationship with climate and land cover factors

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Big Earth Data 2024年第1期8卷 1-32页

作者： claire Obuchowicz Charlotte Poussin Gregory Giuliani Institute for Environmental Sciences EnviroSPACE labUniversity of GenevaGenevaSwitzerland Institute for Environmental Sciences University of GenevaGenevaSwitzerland

Environmental changes are significantly modifying terrestrial vegetation dynamics,with serious consequences on Earth system functioning and provision of ecosystem *** conditions are an essential element underpinning global sustainability frameworks,such as the Sustainable Development Goals(SDGs),requiring effective solutions to assess the impacts of changing land conditions induced by various driving *** the global scale,long-term increase of vegetation greening has been widely reported notably in seasonally snow-covered ecosystems as a response to warming ***,greening trends at the national scale have received less attention,although countries like Switzerland are prone to important changing climate ***,we used a 35-year satellite-derived annual and seasonal time-series of Normalized Difference Vegetation Index(NDVI)to assess vegetation greenness evolution at different spatial and temporal scales across Switzerland and related them to temperature,precipitation,and land cover to investigate possible responses of changing climatic *** indicate that there is a statistically significant greening trend at the national scale with an NDVI mean increasing slope of 0.6%/year for the 61%significant pixels across *** particular,the seasonal mean NDVI shows an important break for winter,autumn and spring seasons starting from 2010,potentially indicating a critical point of changing land *** biogeographical scale,we observed an apparent clustering(Jura-Plateau;Northern-Southern Alps;Eastern-Western Alps)related to landscape characteristics,while forested land cover classes are more responsive to NDVI ***,the NDVI values are mostly a function of temperature at elevations below the tree line rather than *** findings suggest that multi-annual and seasonal NDVI can be a valuable indicator to monitor vegetation conditions at different scales and can provide complementary observati

关键词： Landsat climate land cover NDVI anomaly

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Accuracy of tree mapping based on hand-held laser scanning comparing leaf-on and leaf-off conditions in mixed forests

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Journal of Forestry Research 2024年第5期35卷 14-25页

作者： Frederico Tupinambá-Simões Adrián Pascual Juan Guerra-Hernández cristóbal Ordóñez Tiago de Conto Felipe Bravo iuFOR Sustainable Forest Management Research InstituteUniversity of Valladolid&INIAValladolidSpain Department of Geographical Sciences University of MarylandCollege ParkMD 20742USA Forest Research Centre School of AgricultureUniversity of LisbonTapada da Ajuda1349‑017 LisbonPortugal

The use of mobile laser scanning to survey forest ecosystems is a promising,scalable technology to describe forest 3D structures at high *** confirm the con-sistency in the retrieval of forest structural parameters using hand-held laser scanning(HLS),before operationalizing the method,confirming the data is *** analyzed the per-formance of tree-level mapping based on HLS under differ-ent phenology conditions on a mixed forest in western Spain comprising Pinus pinaster and two deciduous species,Alnus glutinosa and Quercus *** area was surveyed twice during the growing season(July 2022)and once in the deciduous season(February 2022)using several scan-ning *** reference data(418 trees,15 snags)was used to calibrate the HLS data and to assess the influence of phenology when converting 3D data into tree-level attrib-utes(DBH,height and volume).The HLS-based workflow was robust at isolating tree positions and recognizing stems despite changes in ***-six percent of all pairs matched below 65 *** DBH,phenology barely altered *** observed a strong agreement when comparing HLS-based tree height *** values exceeded 2 m when comparing height measurements,confirming height data should be carefully used as reference in remote sensing-based inventories,especially for deciduous *** volume was more precise for pines(r=0.95,and rela-tive RMSE=21.3–23.8%)compared to deciduous species(r=0.91–0.96,and relative RMSE=27.3–30.5%).HLS data and the forest structural complexity tool performed remark-ably,especially in tree positioning considering mixed forests and mixed phenology conditions.

关键词： Precision forestry Forest monitoring Mobile laser scanning Forest inventory

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Digital Twin-Assisted Semi-Federated Learning Framework for Industrial Edge Intelligence

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China Communications 2024年第5期21卷 314-329页

作者： Wu Xiongyue Tang Jianhua marie Siew Shien-Ming Wu School of Intelligent Engineering South China University of TechnologyGuangzhou 511442China Electrical and Computer Engineering Department Carnegie Mellon UniversityPittsburghPA 15213United States

The rapid development of emerging technologies,such as edge intelligence and digital twins,have added momentum towards the development of the Industrial Internet of Things(IIo T).However,the massive amount of data generated by the IIo T,coupled with heterogeneous computation capacity across IIo T devices,and users’data privacy concerns,have posed challenges towards achieving industrial edge intelligence(IEI).To achieve IEI,in this paper,we propose a semi-federated learning framework where a portion of the data with higher privacy is kept locally and a portion of the less private data can be potentially uploaded to the edge *** addition,we leverage digital twins to overcome the problem of computation capacity heterogeneity of IIo T devices through the mapping of physical *** formulate a synchronization latency minimization problem which jointly optimizes edge association and the proportion of uploaded nonprivate *** the joint problem is NP-hard and combinatorial and taking into account the reality of largescale device training,we develop a multi-agent hybrid action deep reinforcement learning(DRL)algorithm to find the optimal *** results show that our proposed DRL algorithm can reduce latency and have a better convergence performance for semi-federated learning compared to benchmark algorithms.

关键词： digital twin edge association industrial edge intelligence(IEI) semi-federated learning

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Photovoltaic waste management in sub-Saharan Africa:current practices in Burkina Faso

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Waste Disposal and Sustainable Energy 2024年第2期6卷 271-282页

作者： Kodami Badza Yrebegnan Moussa Soro marie Sawadogo Laboratoire Energies Renouvelables et EfficacitéEnergétique Institut International d'Ingenierie de I'Eau et de I'Environnement(2iE)01 BP 594 OuagadougouBurkina Faso

Sub-Saharan Africa is witnessing a proliferation of photovoltaic(PV)waste due to the increasing number of solar PV power *** waste(panels,batteries,electrical cables,mounting structures,and inverters)consists of elements such as mercury,cadmium,chromium,lead,copper,aluminum,fluorinated compounds,and plastics that are toxic to human health and the environment if a proper management system is not *** many studies worldwide have focused on PV waste management,very few have been conducted in sub-Saharan *** study aims to investigate the current PV waste management system in Burkina Faso,determine stakeholder profiles,and propose strategies to enhance the existing *** research,interviews,questionnaires,and field visits were used in the *** survey showed that young people,mainly under 30 years of age and with a primary education,dominate(70%)in terms of PV waste collection and repair activities,while the more technical recycling and export activities are carried out mainly(88%)by stakeholders older than 40 years and with a secondary education(60%).Among the older stakeholders,100%are aware of the hazardous nature of PV waste,whereas 36%are young *** an environmental perspective,the main source of contamination observed is the release of lead-rich sulfuric acids into water and soil during the collection and repair *** the recycling of batteries and electrical cables,toxic fumes are emitted into the air,and recycling residues rich in toxic substances are *** reduce risks to human health and the environment when managing PV waste,the introduction of legislation,the multiplication of collection points and appropriate infrastructures,the training and awareness-raising of stakeholders,and the extended responsibility of manufacturers are *** on the economic feasibility of setting up formal management structures are needed to complete this work.

关键词： Photovoltaic waste Sub-Saharan Africa Waste management Recycling Batteries Incineration

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Soluble p75 neurotrophic receptor as a reliable biomarker in neurodegenerative diseases: what is the evidence?

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Neural Regeneration Research 2024年第3期19卷 536-541页

作者： Georges Jourdi Samuel Fleury Imane Boukhatem marie Lordkipanidzé Research Center Montreal Heart InstituteMontrealQCCanada Faculty of Pharmacy Universitéde MontréalMontrealQCCanada UniversitéParis Cité INSERMInnovative Therapies in HaemostasisParisFrance Service d’Hématologie Biologique AP-HPHôpital LariboisièreParisFrance

Neurodegenerative diseases are often misdiagnosed,especially when the diagnosis is based solely on clinical *** p75 neurotrophic receptor(p75^(NTR))has been studied as an index of sensory and motor nerve development and *** cleavable extracellular domain(ECD)is readily detectable in various biological fluids including plasma,serum and *** is evidence for increased p75NTR ECD levels in neurodegenerative diseases such as Alzheimer’s disease,amyotrophic lateral sclerosis,age-related dementia,schizophrenia,and diabetic *** p75^(NTR) ECD could be used as a biomarker for diagnosis and/or prognosis in these disorders,and whether it could potentially lead to the development of targeted therapies,remains an open *** this review,we present and discuss published studies that have evaluated the relevance of this emerging biomarker in the context of various neurodegenerative *** also highlight areas that require further investigation to better understand the role of p75^(NTR) ECD in the clinical diagnosis and management of neurodegenerative disorders.

关键词： Alzheimer’s disease amyotrophic lateral sclerosis biomarker dementia diabetic neuropathy nerve growth factor receptor(NGFR) neurodegeneration p75^(NTR) schizophrenia

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The Artificial Disc Nucleus and Other Strategies for Replacement of the Nucleus Pulposus:Past,Present and Future Designs for an Emerging Surgical Solution

Engineered Regeneration

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Engineered Regeneration 2024年第2期5卷 269-281页

作者： Greg Sacks Vincent DeStefano claire Parker Ryan Lebens Harry Mushlin Renaissance School of Medicine at Stony Brook University Stony BrookNYUSA

Nucleus Pulposus(NP)Replacement is a developing surgical methodology for the treatment of pathology related to degeneration of intervertebral discs(IVDs).This article provides necessary context regarding the patholo-gies treated with this technology,the biomechanical structure and function of the IVD,and the procedures this technology aims to ***,it provides an overview and discussion of commercial and experimental preformed and in situ curing prosthesis designs reported in the scientific literature and summarizes the results of biomechanical and clinical studies evaluating their *** and updated information on the most recent research into NP replacement with novel hydrogel and tissue engineering(TE)strategies is *** of the NP allows for potential improvement in the treatment of degenerative spinal pathologies through minimally invasive surgical techniques.

关键词： Nucleus Pulposus Intradiscal Prosthesis Hydrogel Artificial Disc Implant Spine Surgery

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A Review on Sources,Extractions and Analysis Methods of a Sustainable Biomaterial:Tannins

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Journal of Renewable Materials 2024年第3期12卷 397-425页

作者： Antonio Pizzi marie-Pierre Laborie Zeki Candan LERMAB University of LorraineFaculty of SciencesBlvd des AiguillettesNancy54000France Chair of Forest Biomaterials Institute of Earth and Environmental SciencesUniversity of FreiburgFreiburgGermany Freiburg Materials Research Center Alberst Ludwig University of FreiburgFreiburg79104Germany Department of Forest Products Engineering Faculty of ForestryIstanbul UniversitySariyerIstanbul34473Turkey

Condensed and hydrolysable tannins are non-toxic natural polyphenols that are a commercial commodity industrialized for tanning hides to obtain leather and for a growing number of other industrial applications mainly to substitute petroleum-based *** are a definite class of sustainable materials of the forestry *** have been in operation for hundreds of years to manufacture leather and now for a growing number of applications in a variety of other industries,such as wood adhesives,metal coating,pharmaceutical/medical applications and several *** review presents the main sources,either already or potentially commercial of this forestry by-materials,their industrial and laboratory extraction systems,their systems of analysis with their advantages and drawbacks,be these methods so simple to even appear primitive but nonetheless of proven effectiveness,or very modern and *** constitutes a basic but essential summary of what is necessary to know of these sustainable *** doing so,the review highlights some of the main challenges that remain to be addressed to deliver the quality and economics of tannin supply necessary to fulfill the industrial production requirements for some materials-based uses.

关键词： Tannins flavonoids sources extraction methods analysis methods

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Development of PROTACS degrading KRAS and SOS1

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Oncology Research 2024年第8期32卷 1257-1264页

作者： GERHARD HAMILTON marie-THERESE EGGERSTORFER SANDRA STICKLER Institute of Pharmacology Medical University of ViennaVienna1090Austria

The Kirsten rat sarcoma virus—son of sevenless 1(KRAS-SOS1)axis drives tumor growth preferentially in pancreatic,colon,and lung ***,KRAS G12C mutated tumors can be successfully treated with inhibitors that covalently block the cysteine of the switch II binding pocket of ***,the range of other KRAS mutations is not amenable to treatment and the G12C-directed agents Sotorasib and Adragrasib show a response rate of only approximately 40%,lasting for a mean period of 8 *** approach to increase the efficacy of inhibitors is their inclusion into proteolysis-targeting chimeras(PROTACs),which degrade the proteins of interest and exhibit much higher antitumor activity through multiple cycles of ***,PROTACs have been developed based on KRAS-or SOS1-directed inhibitors coupled to either von Hippel-Lindau(VHL)or Cereblon(CRBN)ligands that invoke the proteasomal *** of these PROTACs show increased activity in vitro and in vivo compared to their cognate inhibitors but their toxicity in normal tissues is not *** CRBN PROTACs containing thalidomide derivatives cannot be tested in experimental *** to such PROTACS arises through downregulation or inactivation of CRBN or factors of the functional VHL E3 ubiquitin *** highly active KRAS and SOS1 PROTACs have been formulated their clinical application remains difficult.

关键词： Proteolysis-targeting chimeras(PROTACs) Kirsten rat sarcoma virus(KRAS) Son of sevenless 1(SOS1) Von Hippel-Lindau Cereblon

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