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Two adjacent NLR genes conferring quantitative resistance to clubroot disease in Arabidopsis are regulated by a stably inherited epiallelic variation

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Plant Communications 2024年第5期5卷 148-162页

作者： Antoine Gravot Benjamin Lie gard Leandro Quadrana Florian Veillet Yoann Aigu Tristan Bargain juliette Benejam Christine Lariagon jocelyne Lemoine Vincent Colot maria j.manzanares-dauleux Melanie jubault IGEPP Institut Agro INRAEUniversitede Rennes35650 Le RheuFrance Institut de Biologie de l’Ecole Normale Superieure(IBENS) Ecole Normale SuperieureCentre National de la Recherche Scientifique(CNRS)Institut National de la Santeet de la Recherche Medicale(INSERM)75005 ParisFrance IGEPP INRAE Institut AgroUniversitede Rennes29260 PloudanielFrance Present address:Aix-Marseille University CEACNRSInstitute of Biosciences and BiotechnologiesBIAM Cadarache13108 Saint-Paul-lez-DuranceFrance.

Clubroot caused by the protist Plasmodiophora brassicae is a major disease affecting cultivated *** a combination of quantitative trait locus(QTL)fine mapping,CRISPR-Cas9 validation,and extensive analyses of DNA sequence and methylation patterns,we revealed that the two adjacent neigh-boring NLR(nucleotide-binding and leucine-rich repeat)genes AT5G47260 and AT5G47280 cooperate in controlling broad-spectrum quantitative partial resistance to the root pathogen *** in Arabidopsis and that they are epigenetically *** variation in DNA methylation is not associated with any nucleotide variation or any transposable element presence/absence variants and is stably ***-ations in DNA methylation at the Pb-At5.2 QTL are widespread across Arabidopsis accessions and corre-late negatively with variations in expression of the two *** study demonstrates that natural,stable,and transgenerationally inherited epigenetic variations can play an important role in shaping resistance to plant pathogens by modulating the expression of immune receptors.

关键词： methylation clubroot Plasmodiophora brassicae AT5G47260 AT5G47280 ADR1-L3 ddm1

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Assessment of a new strategy for selective phenotyping applied to complex traits in <i>Brassica napus</i>

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Open journal of Genetics 2012年第4期2卷 190-201页

作者： Christophe jestin Patrick Vallée Claude Domin maria j. manzanares-dauleux Régine Delourme Agrocampus Ouest Le Rheu Cedex France INRA Le Rheu Cedex France

The accurate mapping of quantitative trait loci (QTL) depends notably on the number of recombination events occurring in the segregating population. The cost of phenotyping often limits the sample size used in QTL mapping. To get round this problem, we assessed a selective phenotyping method, called qtlRec sampling. In order to improve the accuracy of QTL mapping, a subset of individuals was selected to maximize the number of recombination events at putative QTL positions;the usefulness of this subset was compared to a selected sample built to maximize the recombination rate over the whole genome. We assessed this method on the quantitative oil content trait in Brassica napus. We showed that the qtlRec strategy could allow increasing accuracy (both support interval and position) of QTL location while it maintained a similar power of detection. We then applied this approach to the B. napus—Leptosphaeria maculans pathosystem for which resistance QTL with minor effect were previously identified. This allowed the validation of the QTL in six genomic regions. The qtlRec method is an attractive strategy for validating QTL in multiple year and/or location trials for a trait which requires costly and time-consuming phenotyping.

关键词： Selective Phenotyping QTL Brassica Napus Leptosphaeria maculans

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Resolution of metabolic syndrome after following a gluten free diet in an adult woman diagnosed with celiac disease

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World journal of Gastrointestinal Pathophysiology 2011年第3期2卷 49-52页

作者： lvaro García-manzanares Alfredo j Lucendo Sonia González-Castillo jesús Moreno-Fernández Department of Endocrinology Hospital General de Tomellosorea de Atención especializada La Mancha Centro13700 Tomelloso(Ciudad Real)Spain Department of Gastroenterology Hospital General de Tomelloso

Adult celiac disease(CD) presents with very diverse symptoms that are clearly different from those typically seen in pediatric patients,including ferropenic anemia,dyspepsia,endocrine alterations and elevated transaminase concentration. We present the case of a 51-year-old overweight woman with altered basal blood glucose,hypercholesterolemia,hypertriglyceridemia and persisting elevated transaminase levels,who showed all the symptoms for a diagnosis of metabolic syndrome. Because she presented iron deficiency anemia,she was referred to the gastroenterology department and subsequently diagnosed with celiac disease after duodenal biopsies and detection of a compatible HLA haplotype. Gluten-free diet(GFD) was prescribed and after 6 mo the patient showed resolution of laboratory abnormalities(including recovering anemia and iron reserves,normalization of altered lipid and liver function parameters and decrease of glucose blood levels) . No changes in weight or waist circumference were observedand no significant changes in diet were documented apart from the GFD. The present case study is the first reported description of an association between CD and metabolic syndrome,and invites investigation of the metabolic changes induced by gluten in celiac patients.

关键词： Celiac disease Metabolic syndrome Glutenfree diet

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Attenuation of UV-C Solar Radiation as a Function of Altitude(0≤z≤100 km):Rayleigh Diffusion and Photo Dissociation of O_(2) Influence

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Atmospheric and Climate Sciences 2017年第4期7卷 540-553页

作者： jose Luis Pinedo-Vega Carlos Rios-Martínez David jacobo Navarro-Solis j.Ignacio Davila-Rangel Fernando Mireles-Garcia Sonia Azucena Saucedo-Anaya Eduardo manzanares-Acuna Valentin Badillo-Almaraz Department:UAEN Universidad Autonoma de ZacatecasZacatecasMexico

In this paper, we present an analysis of attenuation for UV-C radiation () as a function of the altitude z () by calculating the interaction ratio between the UV-C radiation and the molecular species susceptible of interact with UV-C radiation. The Rayleigh scattering spectral cross sections were calculated, the UV-C spectral cross sections of the species susceptible of interact with UV-C radiation and the UV extraterrestrial (ETR) solar spectrum were standardized with wavelength steps of 1 nm, and The International Standard Atmosphere model (ISO 1972) was adapted to calculate the molecular density. These data were utilized to calculate the photodissociation and Rayleigh scattering ratios as a function of the altitude and to determine to what measure the photodissociation and the Rayleigh diffusion were determinants of the attenuation of UV-C radiation. It became clear that the photo dissociation of O2 is the primordial mechanism of attenuation for the UV-C radiation, but the Rayleigh diffusion appears like a mechanism that encreases the photon flux, raising the performance of the O2 photodissociation. The attenuation capacities of N2O, CO2 and water vapor (H2O) over the UV-C radiation are all similar, although smaller (less than 0.6%), and this is due to their low concentration. The O3, has the theoretical greater attenuation capacity, but it is found in mid-range altitudes? (), where the residual UV-C photons has almost vanished by O2 photo dissociation or Rayleigh diffusion, so the real effect over the UV-C attenuation is minimum.

关键词： UV-C Radiation Rayleigh Scattering O_(2) Photodissociation

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