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Protein interaction network related to Helicobacter pylori infection response

World Journal of Gastroenterology 2009年第36期15卷 4518-4528页

作者： kyu kwang kim Han Bok kim Daeil Foreign Language High School Seoul 136-100South Korea Department of Biotechnology The Research Institute for Basic SciencesHoseo UniversityAsan 336-795 South Korea

AIM:To understand the complex reaction of gastric inflammation induced by Helicobacter pylori(H pylori) in a systematic manner using a protein interaction network. METHODS:The expression of genes significantly changed on microarray during H pylori infection was scanned from the web literary database and translated into proteins.A network of protein interactions was constructed by searching the primary interactions of selected *** constructed network was mathematically analyzed and its biological function was *** addition,the nodes on the network were checked to determine if they had any further functional importance or relation to other proteins by extending them. RESULTS:The scale-free network showing the relationship between inflammation and carcinogenesis was *** analysis showed hub and bottleneck proteins,and these proteins were mostly related to immune *** network contained pathways and proteins related to H pylori infection,such as the JAK-STAT pathway triggered by *** of nuclear factor (NF)-κB,TLR4,and other proteins known to function as core proteins of immune response were also found. These immune-related proteins interacted on the network with pathways and proteins related to the cell cycle,cell maintenance and proliferation,andtranscription regulators such as BRCA1,FOS,REL,and zinc finger *** extension of nodes showed interactions of the immune proteins with cancer- related *** extended network,the core network,a summarized form of the extended network, and cell pathway model were constructed. CONCLUSION:Immune-related proteins activated by H pylori infection interact with proto-oncogene *** hub and bottleneck proteins are potential drug targets for gastric inflammation and cancer.

关键词： Gastric cancer Helicobacter pylori Inflammation Pathway Protein interaction network

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Two-stage dynamic recrystallization and texture evolution in Al-7Mg alloy during hot torsion

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International Journal of Minerals,Metallurgy and Materials 2024年第8期31卷 1900-1911页

作者： kwang Tae Son Chang Hee Cho Myoung Gyun kim Ji Woon Lee School of Mechanical Industrialand Manufacturing EngineeringOregon State UniversityCorvallis OR 97331USA Department of Materials Science Engineering Northwestern UniversityEvanston IL 60208USA Research Institute of Industrial Science and Technology(RIST) Pohang 37673Rep.of Korea Division of Advanced Materials Engineering Kongju National UniversityCheonan 31080Rep.of Korea Center for Advanced Materials and Parts of Powders Kongju National UniversityCheonan 31080Rep.of Korea

Hot torsion tests were performed on the Al-7Mg alloy at the temperature ranging from 300 to 500℃ and strain rates between 0.05 and 5 s^(-1) to explore the progressive dynamic recrystallization(DRX)and texture *** DRX behavior of the alloy manifested two distinct stages:Stage 1 at strain of≤2 and Stage 2 at strains of≥*** Stage 1,there was a slight increase in the DRXed grain fraction(X_(DRX))with predominance of discontinuous DRX(DDRX),followed by a modest change in X_(DRX) until the transition to Stage *** 2 was marked by an accelerated rate of DRX,culminating in a substantial final X_(DRX) of~*** backscattered diffraction(EBSD)analysis on a sample in Stage 2 revealed that continuous DRX(CDRX)predominantly occurred within the(121)[001]grains,whereas the(111)[110]grains underwent a geometric DRX(GDRX)evolution without a noticeable sub-grain ***,a modified Avrami’s DRX kinetics model was utilized to predict the microstructural refinement in the Al-7Mg alloy during the DRX *** this kinetics model did not accurately capture the DDRX behavior in Stage 1,it effectively simulated the DRX rate in Stage *** texture index was employed to assess the evolution of the texture isotropy during hot-torsion test,demonstrating significant improvement(>75%)in texture randomness before the commencement of Stage *** initial texture evolution is attributed to the rotation of parent grains and the substructure evolution,rather than to an increase in X_(DRX).

关键词： Al-7Mg alloys hot deformation hot torsion tests dynamic recrystazlliation microstructure texture

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Artificial intelligence in physiological characteristics recognition for internet of things authentication

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Digital Communications and Networks 2024年第3期10卷 740-755页

作者： Zhimin Zhang Huansheng Ning Fadi Farha Jianguo Ding kim-kwang Raymond Choo School of Computer and Communication Engineering University of Science and Technology BeijingBeijing100083China Beijing Engineering Research Center for Cyberspace Data Analysis and Applications Beijing100083China Faculty of Informatics Engineering Aleppo UniversityAleppoSyria Department of Computer Science Blekinge Institute of Technology37179KarlskronaSweden Department of Information Systems and Cyber Security University of Texas at San AntonioSan AntonioTX78249-0631USA

Effective user authentication is key to ensuring equipment security,data privacy,and personalized services in Internet of Things(IoT)***,conventional mode-based authentication methods(e.g.,passwords and smart cards)may be vulnerable to a broad range of attacks(e.g.,eavesdropping and side-channel attacks).Hence,there have been attempts to design biometric-based authentication solutions,which rely on physiological and behavioral *** characteristics need continuous monitoring and specific environmental settings,which can be challenging to implement in ***,we can also leverage Artificial Intelligence(AI)in the extraction and classification of physiological characteristics from IoT devices processing to facilitate ***,we review the literature on the use of AI in physiological characteristics recognition pub-lished after *** use the three-layer architecture of the IoT(i.e.,sensing layer,feature layer,and algorithm layer)to guide the discussion of existing approaches and their *** also identify a number of future research opportunities,which will hopefully guide the design of next generation solutions.

关键词： Physiological characteristics recognition Artificial intelligence Internet of things Biological-driven authentication

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Network traffic classification:Techniques,datasets,and challenges

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Digital Communications and Networks 2024年第3期10卷 676-692页

作者： Ahmad Azab Mahmoud Khasawneh Saed Alrabaee kim-kwang Raymond Choo Maysa Sarsour College of Information Technology and Systems Victorian Institute of TechnologyAustralia College of Engineering Al Ain UniversityAbu DhabiUnited Arab Emirates Information Systems and Security College of ITUnited Arab Emirates UniversityAl Ain15551United Arab Emirates Department of Information Systems and Cyber Security University of Texas at San AntonioSan AntonioTX78260USA School of Photovoltaic and Renewable Energy Engineering University of New South WalesSydneyNSW2052Australia

In network traffic classification,it is important to understand the correlation between network traffic and its causal application,protocol,or service group,for example,in facilitating lawful interception,ensuring the quality of service,preventing application choke points,and facilitating malicious behavior *** this paper,we review existing network classification techniques,such as port-based identification and those based on deep packet inspection,statistical features in conjunction with machine learning,and deep learning *** also explain the implementations,advantages,and limitations associated with these *** review also extends to publicly available datasets used in the ***,we discuss existing and emerging challenges,as well as future research directions.

关键词： Network classification Machine learning Deep learning Deep packet inspection Traffic monitoring

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Anomaly Detection Using Data Rate of Change on Medical Data

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Computers, Materials & Continua 2024年第9期80卷 3903-3916页

作者： kwang-Cheol Rim Young-Min Yoon Sung-Uk kim Jeong-In kim AI Convergence Research Institute Chosun UniversityGwangju61452Republic of Korea Interdisciplinary Program of Architectural Studies Chonnam UniversityGwangju61186Republic of Korea AINTCHAIN SOFT Co. Ltd.Mokpo-si58750Republic of Korea BK21 Human Resources Development Project Group Chosun UniversityGwangju61452Republic of Korea

The identification and mitigation of anomaly data,characterized by deviations from normal patterns or singularities,stand as critical endeavors in modern technological landscapes,spanning domains such as Non-Fungible Tokens(NFTs),cyber-security,and the burgeoning *** paper presents a novel proposal aimed at refining anomaly detection methodologies,with a particular focus on continuous data *** essence of the proposed approach lies in analyzing the rate of change within such data streams,leveraging this dynamic aspect to discern anomalies with heightened precision and *** empirical evaluation,our method demonstrates a marked improvement over existing techniques,showcasing more nuanced and sophisticated result ***,we envision a trajectory of continuous research and development,wherein iterative refinement and supplementation will tailor our approach to various anomaly detection scenarios,ensuring adaptability and robustness in real-world applications.

关键词： Anomaly data anomaly detection medical anomaly data cyber security rate of change

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Survey on digital twins for Internet of Vehicles:Fundamentals,challenges,and opportunities

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Digital Communications and Networks 2024年第2期10卷 237-247页

作者： Jiajie Guo Muhammad Bilal Yuying Qiu Cheng Qian Xiaolong Xu kim-kwang Raymond Choo School of Computer and Software Nanjing University of Information Science and TechnologyNanjing210044China Department of Computer Engineering Hankuk University of Foreign StudiesGyeonggi-do17035South Korea Jiangsu Hydraulic Research Institute Nanjing210044China Department of Information Systems and Cyber Security University of Texas at San AntonioSan AntonioTX78249-0631USA

As autonomous vehicles and the other supporting infrastructures(e.g.,smart cities and intelligent transportation systems)become more commonplace,the Internet of Vehicles(IoV)is getting increasingly *** have been attempts to utilize Digital Twins(DTs)to facilitate the design,evaluation,and deployment of IoV-based systems,for example by supporting high-fidelity modeling,real-time monitoring,and advanced predictive ***,the literature review undertaken in this paper suggests that integrating DTs into IoV-based system design and deployment remains an understudied *** addition,this paper explains how DTs can benefit IoV system designers and implementers,as well as describes several challenges and opportunities for future researchers.

关键词： Internet of vehicles Digital twin Simulation Traffic systems

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TMAS: A transaction misbehavior analysis scheme for blockchain

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BLOCKCHAIN-RESEARCH AND APPLICATIONS 2024年第3期5卷 42-52页

作者： Huang, Shiyong Hao, Xiaohan Sun, Yani Wu, Chenhuang Li, Huimin Ren, Wei Choo, kim-kwang Raymond China Univ Geosci Sch Comp Sci Wuhan 430074 Peoples R China Beihang Univ Yunnan Innovat Inst Yunnan Key Lab Blockchain Applicat Technol Kunming 650233 Peoples R China Putian Univ Fujian Key Lab Financial Informat Proc Putian 351100 Peoples R China Hong Kong Univ Sci & Technol Artificial Intelligence Thrust Informat Hub Guangzhou 511400 Peoples R China Univ Texas San Antonio Dept Informat Syst & Cyber Secur San Antonio TX 78249 USA

Blockchain-based cryptocurrencies, such as Bitcoins, are increasingly popular. However, the decentralized and anonymous nature of these currencies can also be (ab)used for nefarious activities such as money laundering, thus reinforcing the importance of designing tools to effectively detect malicious transaction misbehaviors. In this paper, we propose TMAS, a transaction misbehavior analysis scheme for blockchain-based cryptocurrencies. Specifically, the proposed system includes ten features in the transaction graph, two heuristic money laundering models, and an analysis method for account linkage, which identifies accounts that are distinct but controlled by an identical entity. To evaluate the effectiveness of our proposed indicators and models, we analyze 100 million transactions and compute transaction features, and are able to identify a number of suspicious accounts. Moreover, the proposed methods can be applied to other cryptocurrencies, such as token-based cryptocurrencies (e.g., Bitcoins) and account-based cryptocurrencies (e.g., Ethereum).

关键词： Blockchain Anti-money laundering Bitcoin Cyptocurrency

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Surface-functionalized hole-selective monolayer for high efficiency single-junction wide-bandgap and monolithic tandem perovskite solar cells

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Journal of Energy Chemistry 2024年第1期88卷 317-326,I0008页

作者： Devthade Vidyasagar Yeonghun Yun Jae Yu Cho Hyemin Lee kyung Won kim Yong Tae kim Sung Woong Yang Jina Jung Won Chang Choi Seonu kim Rajendra Kumar Gunasekaran Seok Beom Kang kwang Heo Dong Hoe kim Jaeyeong Heo Sangwook Lee School of Materials Science and Engineering Kyungpook National UniversityDaegu 41566Republic of Korea Department of Materials Science and Engineering and Optoelectronics Convergence Research CenterChonnam National UniversityGwangju 61186Republic of Korea Department of Materials Science and Engineering Korea UniversitySeoul 02841Republic of Korea Department of Nanotechnology and Advanced Materials Engineering Sejong UniversitySeoul 05006Republic of Korea

Carbazole moiety-based 2PACz([2-(9H-carbazol-9-yl)ethyl]phosphonic acid)self-assembled monolayers(SAMs)are excellent hole-selective contact(HSC)materials with abilities to excel the charge-transferdynamics of perovskite solar cells(PSCs).Herein,we report a facile but powerful method to functionalize the surface of 2PACz-SAM,by which reproducible,highly stable,high-efficiency wide-bandgap PSCs can be *** 2PACz surface treatment with various donor number solvents improves assembly of 2PACz-SAM and leave residual surface-bound solvent molecules on 2PACz-SAM,which increases perovskite grain size,retards halide segregation,and accelerates hole *** surface functionalization achieves a high power conversion efficiency(PCE)of 17.62%for a single-junction wide-bandgap(~1.77 e V)*** also demonstrate a monolithic all-perovskite tandem solar cell using surfaceengineered HSC,showing high PCE of 24.66%with large open-circuit voltage of 2.008 V and high fillfactor of 81.45%.Our results suggest this simple approach can further improve the tandem device,when coupled with a high-performance narrow-bandgap sub-cell.

关键词： Perovskite solar cells 2PACz Monolithic tandem solar cells Wide bandgap

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α1-COP modulates plasmodesmata function through sphingolipid enzyme regulation

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Journal of Integrative Plant Biology 2024年第8期66卷 1639-1657页

作者： Arya Bagus Boedi Iswanto Minh Huy Vu Jong Cheol Shon Ritesh Kumar Shuwei Wu Hobin Kang Da-Ran kim Geon Hui Son Woe Yoen kim Youn-Sig Kwak kwang Hyeon Liu Sang Hee kim Jae-Yean kim Division of Applied Life Science(BK21 FOUR Program) Plant Molecular Biology and Biotechnology Research CenterGyeongsang National UniversityJinju 52828Korea College of Pharmacy and Research Institute of Pharmaceutical Sciences Kyungpook National UniversityDaegu 702-701Korea Departement of Plant Medicine Gyeongsang National UniversityJinju 52828Korea Division of Life Science Gyeongsang National UniversityJinju 52828Korea

Callose,aβ-1,3-glucan plant cell wall polymer,regulates symplasmic channel size at plasmodesmata(PD)and plays a crucial role in a variety of plant ***,elucidating the molecular mechanism of PD callose homeostasis is *** screened and identified an Arabidopsis mutant plant with excessive callose deposition at PD and found that the mutated gene wasα1-COP,a member of the coat protein I(COPI)coatomer *** report that loss of function ofα1-COP elevates the callose accumulation at PD by affecting subcellular protein localization of callose degradation enzyme Pd *** process is linked to the functions of ERH1,an inositol phosphoryl ceramide synthase,and glucosylceramide synthase through physical interactions with theα1-COP ***,the loss of function ofα1-COP alters the subcellular localization of ERH1 and GCS proteins,resulting in a reduction of Glc Cers and Glc HCers molecules,which are key sphingolipid(SL)species for lipid raft *** findings suggest thatα1-COP protein,together with SL modifiers controlling lipid raft compositions,regulates the subcellular localization of GPI-anchored PDBG2 proteins,and hence the callose turnover at PD and symplasmic movement of *** findings provide the first key clue to link the COPI-mediated intracellular trafficking pathway to the callose-mediated intercellular signaling pathway through PD.

关键词： callose coatomer proteins membrane-bound vesicle plasmodesmata sphingolipid enzymes

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Stable operation of highly loaded pure Si-Fe anode under ambient pressure via carboxy silane-directed robust solid electrolyte interphase

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Journal of Energy Chemistry 2024年第7期94卷 568-576页

作者： Guntae Lim Dong Guk Kang Hyeon Gyu Lee Yen Hai Thi Tran Kihun An Junghyun Choi kwang Chul Roh Do Youb kim Seung-Wan Song Department of Chemical Engineering&Applied Chemistry Chungnam National University Daejeon 34134Republic of Korea Energy Storage Materials Center Korea Institute of Ceramic Engineering&TechnologyJinju 52851Republic of Korea Advanced Energy Materials Research Center Korea Research Institute of Chemical TechnologyDaejeon 34114Republic of Korea

Incorporation of higher content Si anode material beyond 5 wt% to Li-ion batteries(LIBs)is challenging,owing to large volume change,swelling,and solid electrolyte interphase(SEI)instability ***,a strategy of diacetoxydimethylsilane(DAMS)additive-directed SEI stabilization is proposed for a stable operation of Si-0.33FeSi_(2)(named as Si-Fe)anode without graphite,which provides siloxane inorganics and organics enrichment that compensate insufficient passivation of fluoroethylene carbonate(FEC)additive and reduce a dependence on *** stable cycling performance of highly loaded(3.5 mA h cm^(-2))pure Si-Fe anode is achieved with 2 wt%DAMS combined with 9 wt%FEC additives under ambient pressure,yielding high capacity 1270 mA h g^(-1)at 0.5 C and significantly improved capacity retention of 81% after 100 cycles,whereas short circuit and rapid capacity fade occur with FEC only ***-directed robust SEI layer dramatically suppresses swelling and particles crossover through separator,and therefore prevents short circuit,demonstrating a possible operation of pure Si or Sidominant anodes in the next-generation high-energy-density and safe LIBs.

关键词： High-energy Li-ion battery Pure Si-Fe anode without graphite Silane additive SEI layer Suppressed swelling

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